| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153947195
Identifier: 153947195
GI number: 153947195
Start: 3314833
End: 3315627
Strand: Reverse
Name: 153947195
Synonym: YpsIP31758_2941
Alternate gene names: NA
Gene position: 3315627-3314833 (Counterclockwise)
Preceding gene: 153950845
Following gene: 153949930
Centisome position: 70.2
GC content: 51.45
Gene sequence:
>795_bases ATGAGCGGTTCTTTGCGGAAGACCCGCGCTTCTACCCGCACCTTTGATCTACTCCGCGTTGAATCTGAAGCAGAAATAAA ACGCCTGTTTGAACAATCAGATTCGCCCGTTCTGGACGGTGCGACGCTGGACGGCAGTCTCGCTAACAGTGCTGCGAAAT TGCTGCACCGGCTCCGGAGGCGATTTAACAGCGTGTTCAATGACATGACAGATAAAGCGACGGCCCGAATGCTGGAACGG GTTTCCGGTAATGCGGGCAGTGACGTTAAACGCAGCTTAGAGGAAATCGGGGAGGGGGTATCAATCAAAGTAAATATGTT ATCGCCAGCAGTGAAAGAAACAATTCAAGCGAAAGGGTATGAAGCAGCCAACCTGATCAAACGTGTACCAAGTGAATATC TGGACGACATCGGCGCGGAAGTGATGCGCTCAATATCTTCCGGTCGTGGACTACAGGATTTACAGCCCGCACTGGAAAAA AGAGGCGTCAAGGTGCGTAACTGGGCGAAAAACGTCGCACTTGACCAGACCCGCAAAGTGTACGACGGCATTTCAACAGC AGCCATGAAATCCGCAGGCATTCGTAAATTTGAGTGGGTTCATAGCGGGGGCAGCAATGACCCACGCGAACACCATATGT TGCCATGGCCAGCAGGGCTAAATGGTGGGATTTTCGATATAGACGCCCCCCCTATTATTGACAAACGAACTGGCGAGCGC GGGACTCCTGGGCAGTTGCCTTATTGCCGATGTACCAAACGGCCAATAATTGATTTTGGTGATGACGATGAGTGA
Upstream 100 bases:
>100_bases CCGGCAGAAACAATAGCGAAAATGCTAACCACCCTGAAAGACAAGGATGAGCGCAAGCAAGGTCATACTGCACCAACTCA CTCAGGAAACTATCAGGGTG
Downstream 100 bases:
>100_bases ACGCTCAATTGATACAAACGGCTGGTTTGAATCCCCGAACAACCCCTTAAGCAAAGTCGGTATTTATGCCTACCTAGGCA AAAACATTCCCGGCGCACCT
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Head Protein; Phage Head Morphogenesis Protein SPP1 Gp7 Family; Head Morphogenesis; Phage Mu -Like Protein
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MSGSLRKTRASTRTFDLLRVESEAEIKRLFEQSDSPVLDGATLDGSLANSAAKLLHRLRRRFNSVFNDMTDKATARMLER VSGNAGSDVKRSLEEIGEGVSIKVNMLSPAVKETIQAKGYEAANLIKRVPSEYLDDIGAEVMRSISSGRGLQDLQPALEK RGVKVRNWAKNVALDQTRKVYDGISTAAMKSAGIRKFEWVHSGGSNDPREHHMLPWPAGLNGGIFDIDAPPIIDKRTGER GTPGQLPYCRCTKRPIIDFGDDDE
Sequences:
>Translated_264_residues MSGSLRKTRASTRTFDLLRVESEAEIKRLFEQSDSPVLDGATLDGSLANSAAKLLHRLRRRFNSVFNDMTDKATARMLER VSGNAGSDVKRSLEEIGEGVSIKVNMLSPAVKETIQAKGYEAANLIKRVPSEYLDDIGAEVMRSISSGRGLQDLQPALEK RGVKVRNWAKNVALDQTRKVYDGISTAAMKSAGIRKFEWVHSGGSNDPREHHMLPWPAGLNGGIFDIDAPPIIDKRTGER GTPGQLPYCRCTKRPIIDFGDDDE >Mature_263_residues SGSLRKTRASTRTFDLLRVESEAEIKRLFEQSDSPVLDGATLDGSLANSAAKLLHRLRRRFNSVFNDMTDKATARMLERV SGNAGSDVKRSLEEIGEGVSIKVNMLSPAVKETIQAKGYEAANLIKRVPSEYLDDIGAEVMRSISSGRGLQDLQPALEKR GVKVRNWAKNVALDQTRKVYDGISTAAMKSAGIRKFEWVHSGGSNDPREHHMLPWPAGLNGGIFDIDAPPIIDKRTGERG TPGQLPYCRCTKRPIIDFGDDDE
Specific function: Unknown
COG id: COG2369
COG function: function code S; Uncharacterized protein, homolog of phage Mu protein gp30
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29111; Mature: 28980
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGSLRKTRASTRTFDLLRVESEAEIKRLFEQSDSPVLDGATLDGSLANSAAKLLHRLRR CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH RFNSVFNDMTDKATARMLERVSGNAGSDVKRSLEEIGEGVSIKVNMLSPAVKETIQAKGY HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEHHCHHHHHHHHHCCC EAANLIKRVPSEYLDDIGAEVMRSISSGRGLQDLQPALEKRGVKVRNWAKNVALDQTRKV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH YDGISTAAMKSAGIRKFEWVHSGGSNDPREHHMLPWPAGLNGGIFDIDAPPIIDKRTGER HHHHHHHHHHHCCCHHHHHHHCCCCCCCHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCC GTPGQLPYCRCTKRPIIDFGDDDE CCCCCCCCHHCCCCCCCCCCCCCC >Mature Secondary Structure SGSLRKTRASTRTFDLLRVESEAEIKRLFEQSDSPVLDGATLDGSLANSAAKLLHRLRR CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH RFNSVFNDMTDKATARMLERVSGNAGSDVKRSLEEIGEGVSIKVNMLSPAVKETIQAKGY HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEHHCHHHHHHHHHCCC EAANLIKRVPSEYLDDIGAEVMRSISSGRGLQDLQPALEKRGVKVRNWAKNVALDQTRKV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH YDGISTAAMKSAGIRKFEWVHSGGSNDPREHHMLPWPAGLNGGIFDIDAPPIIDKRTGER HHHHHHHHHHHCCCHHHHHHHCCCCCCCHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCC GTPGQLPYCRCTKRPIIDFGDDDE CCCCCCCCHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA