| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153950845
Identifier: 153950845
GI number: 153950845
Start: 3315581
End: 3316189
Strand: Reverse
Name: 153950845
Synonym: YpsIP31758_2942
Alternate gene names: NA
Gene position: 3316189-3315581 (Counterclockwise)
Preceding gene: 153948711
Following gene: 153947195
Centisome position: 70.21
GC content: 46.8
Gene sequence:
>609_bases ATGAGCAATGTAACTTTCGTCTATGACCAGGATTCGGGTTTATCAGCAGGGTTAAGTGGCTTCATTAATGAGTCTGGCGC CTACGTCTTCACCATTTCAGAAGCTAAATATGTGATCAGCTCTGGCGGCGCTAAATCAGTTGAGTTCTCTGTTGAAACTG ATGATGGGCGCAAGGCAAATTACCTTAATGTTTACACCGTCAAGAAAGACGGAAGTTCTAATACGCATGGCGTAAATATG ATAAATGCGATGATGGGCTGCGCTGGCGTTAAGCAGCTCACTATGATTAAGAATGAAGCTGGCATTGATGTGGCCCCTGA GTTTGTAGGCCGCAAGTTGGGTCTGGTGCTGCAAAAAACGCTCAAAACAAAAGATGATGGTCGTGAGACTTACAACTTTG ATATTCGCATTCCGTACTTTGCACAAAGCCAGAGAACGCTACAAGAGCATGTAGCCAACGCCCCGGCAGAAACAATAGCG AAAATGCTAACCACCCTGAAAGACAAGGATGAGCGCAAGCAAGGTCATACTGCACCAACTCACTCAGGAAACTATCAGGG TGATGAGCGGTTCTTTGCGGAAGACCCGCGCTTCTACCCGCACCTTTGA
Upstream 100 bases:
>100_bases TCGAAACTGAAGAAATTGAAAATGATCTTCTGACTGTAGATCGGGATATTTGCGATTACTACGGCATCAATAATGTTCAC CAAATTAAAGGAAACGCAGC
Downstream 100 bases:
>100_bases TCTACTCCGCGTTGAATCTGAAGCAGAAATAAAACGCCTGTTTGAACAATCAGATTCGCCCGTTCTGGACGGTGCGACGC TGGACGGCAGTCTCGCTAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MSNVTFVYDQDSGLSAGLSGFINESGAYVFTISEAKYVISSGGAKSVEFSVETDDGRKANYLNVYTVKKDGSSNTHGVNM INAMMGCAGVKQLTMIKNEAGIDVAPEFVGRKLGLVLQKTLKTKDDGRETYNFDIRIPYFAQSQRTLQEHVANAPAETIA KMLTTLKDKDERKQGHTAPTHSGNYQGDERFFAEDPRFYPHL
Sequences:
>Translated_202_residues MSNVTFVYDQDSGLSAGLSGFINESGAYVFTISEAKYVISSGGAKSVEFSVETDDGRKANYLNVYTVKKDGSSNTHGVNM INAMMGCAGVKQLTMIKNEAGIDVAPEFVGRKLGLVLQKTLKTKDDGRETYNFDIRIPYFAQSQRTLQEHVANAPAETIA KMLTTLKDKDERKQGHTAPTHSGNYQGDERFFAEDPRFYPHL >Mature_201_residues SNVTFVYDQDSGLSAGLSGFINESGAYVFTISEAKYVISSGGAKSVEFSVETDDGRKANYLNVYTVKKDGSSNTHGVNMI NAMMGCAGVKQLTMIKNEAGIDVAPEFVGRKLGLVLQKTLKTKDDGRETYNFDIRIPYFAQSQRTLQEHVANAPAETIAK MLTTLKDKDERKQGHTAPTHSGNYQGDERFFAEDPRFYPHL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22279; Mature: 22148
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNVTFVYDQDSGLSAGLSGFINESGAYVFTISEAKYVISSGGAKSVEFSVETDDGRKAN CCCEEEEEECCCCCCCCHHHHCCCCCCEEEEECCCEEEEECCCCCEEEEEEECCCCCCCC YLNVYTVKKDGSSNTHGVNMINAMMGCAGVKQLTMIKNEAGIDVAPEFVGRKLGLVLQKT EEEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHEEECCCCCCEECHHHHHHHHHHHHHHH LKTKDDGRETYNFDIRIPYFAQSQRTLQEHVANAPAETIAKMLTTLKDKDERKQGHTAPT HCCCCCCCEEEEEEEEECCHHCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHCCCCCCC HSGNYQGDERFFAEDPRFYPHL CCCCCCCCCCEECCCCCCCCCC >Mature Secondary Structure SNVTFVYDQDSGLSAGLSGFINESGAYVFTISEAKYVISSGGAKSVEFSVETDDGRKAN CCEEEEEECCCCCCCCHHHHCCCCCCEEEEECCCEEEEECCCCCEEEEEEECCCCCCCC YLNVYTVKKDGSSNTHGVNMINAMMGCAGVKQLTMIKNEAGIDVAPEFVGRKLGLVLQKT EEEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHEEECCCCCCEECHHHHHHHHHHHHHHH LKTKDDGRETYNFDIRIPYFAQSQRTLQEHVANAPAETIAKMLTTLKDKDERKQGHTAPT HCCCCCCCEEEEEEEEECCHHCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHCCCCCCC HSGNYQGDERFFAEDPRFYPHL CCCCCCCCCCEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA