| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
Click here to switch to the map view.
The map label for this gene is yghU [H]
Identifier: 153947168
GI number: 153947168
Start: 431552
End: 432403
Strand: Reverse
Name: yghU [H]
Synonym: YpsIP31758_0370
Alternate gene names: 153947168
Gene position: 432403-431552 (Counterclockwise)
Preceding gene: 153948356
Following gene: 153949303
Centisome position: 9.15
GC content: 49.41
Gene sequence:
>852_bases ATGAAAGATAACGAATACCAACCGCCGAAAATCTGGACGGAAAACAATGCCAGCGGCGGTGTGTGGTCTAAAATCAATCG TCCGACAGCGGGTGCCCGATATGAAGCTGACCTGCCCGTAGGTAAACACCCGTTGCAGCTCTATTCCATGGGTACACCGA ATGGCCAAAAGGTGACTATTCTGCTGGAAGAGTTGCTGGCGTTGGGGGAGAAAGGCGCAGAATATGATGCCCATTTGATT CGTATCAGTGAAGGCGAGCAGTTCTCAAGTGGCTTTGTTAGCATCAATCCCAATTCAAAGATTCCGGCCCTGATGGACTA TTCATCTACCCCACCAGTAAGGGTTTTTGAGTCTGGTGCCATTCTGCTTTATTTGGCCGATAAATTCGGTCATTTCTTAC CGAAATCTCATGCAGCAAGAACTGAAGCGCTCAATTGGCTGTTCTGGCTACAAGGTGCAGCCCCTTATTTAGGGGGCGGT TTTGGGCATTTTTATCACTACGCGCCAGTGAAGATTGAATACGCTATCGACCGTTTCACCATGGAAGCCAAGCGCCAGCT CGATTTACTCAACACTCAGCTCAAAACACATGAGTATATCGCGGGTGATGAGTACACTATTGCGGATATCGCTATCTGGC CGTGGTACGGCAGCTTGGTGCTTGGCTTGCAATATGAAGCGGGTGAATTCCTGGATGTGAAATCCTATACTCACCTGATT CGTTGGACAGAGACCATCGCGAAACGCCCTGCGGTGCAACGTGGTCGCATCGTTAACCGTACTTGGGGGGCGCCAGAAGA GCAATTACCTGAGCGCCATGATGCAGCAGATTTTGACTCACTCATAAAGTAA
Upstream 100 bases:
>100_bases TTGCAGGAAGGCGGCACCCGAGAGACCAATCGTCAGGAACCGATTTGAACGCAGCTTGAAGTATGACGAGTCTATTCATT CTCAAATAAGGTAATCCATG
Downstream 100 bases:
>100_bases GTTTACTGACCTAATAAAAGAGCTGACCTAGTAAAAGATCTGACCTGATAAAAAGAACCGGCCTTAGTGCAGGATCAGAG TGCTGAAAAAACCCGATGAC
Product: glutathione S-transferase YghU
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MKDNEYQPPKIWTENNASGGVWSKINRPTAGARYEADLPVGKHPLQLYSMGTPNGQKVTILLEELLALGEKGAEYDAHLI RISEGEQFSSGFVSINPNSKIPALMDYSSTPPVRVFESGAILLYLADKFGHFLPKSHAARTEALNWLFWLQGAAPYLGGG FGHFYHYAPVKIEYAIDRFTMEAKRQLDLLNTQLKTHEYIAGDEYTIADIAIWPWYGSLVLGLQYEAGEFLDVKSYTHLI RWTETIAKRPAVQRGRIVNRTWGAPEEQLPERHDAADFDSLIK
Sequences:
>Translated_283_residues MKDNEYQPPKIWTENNASGGVWSKINRPTAGARYEADLPVGKHPLQLYSMGTPNGQKVTILLEELLALGEKGAEYDAHLI RISEGEQFSSGFVSINPNSKIPALMDYSSTPPVRVFESGAILLYLADKFGHFLPKSHAARTEALNWLFWLQGAAPYLGGG FGHFYHYAPVKIEYAIDRFTMEAKRQLDLLNTQLKTHEYIAGDEYTIADIAIWPWYGSLVLGLQYEAGEFLDVKSYTHLI RWTETIAKRPAVQRGRIVNRTWGAPEEQLPERHDAADFDSLIK >Mature_283_residues MKDNEYQPPKIWTENNASGGVWSKINRPTAGARYEADLPVGKHPLQLYSMGTPNGQKVTILLEELLALGEKGAEYDAHLI RISEGEQFSSGFVSINPNSKIPALMDYSSTPPVRVFESGAILLYLADKFGHFLPKSHAARTEALNWLFWLQGAAPYLGGG FGHFYHYAPVKIEYAIDRFTMEAKRQLDLLNTQLKTHEYIAGDEYTIADIAIWPWYGSLVLGLQYEAGEFLDVKSYTHLI RWTETIAKRPAVQRGRIVNRTWGAPEEQLPERHDAADFDSLIK
Specific function: Unknown
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI87082195, Length=280, Percent_Identity=70, Blast_Score=424, Evalue=1e-120, Organism=Escherichia coli, GI1788640, Length=213, Percent_Identity=40.3755868544601, Blast_Score=149, Evalue=3e-37, Organism=Escherichia coli, GI87081789, Length=197, Percent_Identity=28.9340101522843, Blast_Score=65, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6324100, Length=255, Percent_Identity=30.9803921568627, Blast_Score=90, Evalue=5e-19, Organism=Drosophila melanogaster, GI28571670, Length=181, Percent_Identity=29.8342541436464, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI17864592, Length=207, Percent_Identity=28.5024154589372, Blast_Score=73, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 31929; Mature: 31929
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDNEYQPPKIWTENNASGGVWSKINRPTAGARYEADLPVGKHPLQLYSMGTPNGQKVTI CCCCCCCCCEEEECCCCCCCCHHCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCEEEH LLEELLALGEKGAEYDAHLIRISEGEQFSSGFVSINPNSKIPALMDYSSTPPVRVFESGA HHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEEECCCCCCCEEECCCCCCCEEEECCCE ILLYLADKFGHFLPKSHAARTEALNWLFWLQGAAPYLGGGFGHFYHYAPVKIEYAIDRFT EEEEEECHHHHHCCCCHHHHHHHHHEEEEECCCCCCCCCCHHHHEEECCEEEEEEHHHHH MEAKRQLDLLNTQLKTHEYIAGDEYTIADIAIWPWYGSLVLGLQYEAGEFLDVKSYTHLI HHHHHHHHHHHHHHHHHEEECCCCEEEEEEEEECCCCEEEEEEEECCCCEEEHHHHHHHH RWTETIAKRPAVQRGRIVNRTWGAPEEQLPERHDAADFDSLIK HHHHHHHHCCCHHCCCEEECCCCCCHHHCCCCCCCCCHHHHCC >Mature Secondary Structure MKDNEYQPPKIWTENNASGGVWSKINRPTAGARYEADLPVGKHPLQLYSMGTPNGQKVTI CCCCCCCCCEEEECCCCCCCCHHCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCEEEH LLEELLALGEKGAEYDAHLIRISEGEQFSSGFVSINPNSKIPALMDYSSTPPVRVFESGA HHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEEECCCCCCCEEECCCCCCCEEEECCCE ILLYLADKFGHFLPKSHAARTEALNWLFWLQGAAPYLGGGFGHFYHYAPVKIEYAIDRFT EEEEEECHHHHHCCCCHHHHHHHHHEEEEECCCCCCCCCCHHHHEEECCEEEEEEHHHHH MEAKRQLDLLNTQLKTHEYIAGDEYTIADIAIWPWYGSLVLGLQYEAGEFLDVKSYTHLI HHHHHHHHHHHHHHHHHEEECCCCEEEEEEEEECCCCEEEEEEEECCCCEEEHHHHHHHH RWTETIAKRPAVQRGRIVNRTWGAPEEQLPERHDAADFDSLIK HHHHHHHHCCCHHCCCEEECCCCCCHHHCCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]