| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153948356
Identifier: 153948356
GI number: 153948356
Start: 434155
End: 435330
Strand: Reverse
Name: 153948356
Synonym: YpsIP31758_0372
Alternate gene names: NA
Gene position: 435330-434155 (Counterclockwise)
Preceding gene: 153948953
Following gene: 153947168
Centisome position: 9.22
GC content: 45.66
Gene sequence:
>1176_bases ATGAAAAAACTCATTAAACGGCTGGAGATCATCAAAAGTGGTATTGAGCTTGAAGATGACGACATTATTCGCCACCAACT CCCCTATCTTAAAAGTGAGACTCAGGACCCTGTGCTGGTTTTTATCGTCATGGCGATTGAACAGGGAAAATTCACCCAAG CTTTGGATGCGATTGCAACCTGGCTGGGAAGCAAGCAAGGGGTCATACAGTGGCAGGATATTGAACTGGCCGCTTGCAAG CTTGAACTGAAAGCCCTGGAGGAACAGTTAAGCGAATTAATTGATAAACGTAATGAGCGTATTCAGCTACTGGATGACTT TAACGATCTCTATCTGGTACGCCTTGGCCCGTTGATGAAGCAAATCCTTAATCTGCGTAGGCAGCTGGCAGAAAGCACTT TACGTAAAGCCGAAGCAGAAGCCCGGCGCAGAGAACGCGACTATCGCAATTGCCAACAATATATTTCTCAAGCGATAGAC GAACTTATTTCGTTAAAACAGCGGTGGTTGGCTCTCCCTTCTATTTCTAATGACACTATTGAGATACGAAACCGAATTCA GCAACAGACAGAATTGATTACCGCATTACTGGCTGAAATTAAAGAATTGGAAAATAGCTTTTGCACACGGAATACCGAGT CAACACGCAAAGCCCGTGAAGAAGCAAAAGAGAAATACGAACGTTATCAAGAACAGCAGACCGATGCAGAACAACGACTT GATAATGATAGGAAACTCTCCTCTGAGCAACGCCAGGATCTCAAACGGTTGTGGCGGCAAGCCAGCCGGCTTTGCCATCC CGATCTCGTGGCTGATGCGTTTAAAGAAAAAGCCCATCAATTGATGGTTCAACTCAATCAAGCCCGCCAACGAGGTGACT TCCCCGCTATTCACGCGTTGCTGGAGAGTTTAAAGCAAGGGCTTGAACCACTGATGGCCAGCGATCTTATCGATGATCTT GAACGGTTACGCAGAAAAATCAGCGATGTGCGAACACAAATTGACGCGATATTACACGAGATCGACGCGCTGAAAGGAGA AGAGTCATGGCGGCTTGCCACCTCTTTGCCTGACAAAGATAAATGGTTCAAAGAACAAGAAAATGTCTTATCCAAGACAC TTAACATTCTTGAGCGGCAAGTCGAGGAAGCATCAAGAGTGCTCTATGAAGCATAA
Upstream 100 bases:
>100_bases CACCATCCTTGCGGGATCCCCCTTCATTCATCTGGAACAATGTGAAACCGTTGTTTAGTATGTCGGTATTCTGCCTACGT TATCAGCAAATCCTATATTT
Downstream 100 bases:
>100_bases CGCTATGAAACATAGTTCGCTGAAACATAGTTCGCTGAAGCATAATTCTATGAAACATAATATTGTCTTAAAGCGTAAAA AACCCGCGCATGGACTGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MKKLIKRLEIIKSGIELEDDDIIRHQLPYLKSETQDPVLVFIVMAIEQGKFTQALDAIATWLGSKQGVIQWQDIELAACK LELKALEEQLSELIDKRNERIQLLDDFNDLYLVRLGPLMKQILNLRRQLAESTLRKAEAEARRRERDYRNCQQYISQAID ELISLKQRWLALPSISNDTIEIRNRIQQQTELITALLAEIKELENSFCTRNTESTRKAREEAKEKYERYQEQQTDAEQRL DNDRKLSSEQRQDLKRLWRQASRLCHPDLVADAFKEKAHQLMVQLNQARQRGDFPAIHALLESLKQGLEPLMASDLIDDL ERLRRKISDVRTQIDAILHEIDALKGEESWRLATSLPDKDKWFKEQENVLSKTLNILERQVEEASRVLYEA
Sequences:
>Translated_391_residues MKKLIKRLEIIKSGIELEDDDIIRHQLPYLKSETQDPVLVFIVMAIEQGKFTQALDAIATWLGSKQGVIQWQDIELAACK LELKALEEQLSELIDKRNERIQLLDDFNDLYLVRLGPLMKQILNLRRQLAESTLRKAEAEARRRERDYRNCQQYISQAID ELISLKQRWLALPSISNDTIEIRNRIQQQTELITALLAEIKELENSFCTRNTESTRKAREEAKEKYERYQEQQTDAEQRL DNDRKLSSEQRQDLKRLWRQASRLCHPDLVADAFKEKAHQLMVQLNQARQRGDFPAIHALLESLKQGLEPLMASDLIDDL ERLRRKISDVRTQIDAILHEIDALKGEESWRLATSLPDKDKWFKEQENVLSKTLNILERQVEEASRVLYEA >Mature_391_residues MKKLIKRLEIIKSGIELEDDDIIRHQLPYLKSETQDPVLVFIVMAIEQGKFTQALDAIATWLGSKQGVIQWQDIELAACK LELKALEEQLSELIDKRNERIQLLDDFNDLYLVRLGPLMKQILNLRRQLAESTLRKAEAEARRRERDYRNCQQYISQAID ELISLKQRWLALPSISNDTIEIRNRIQQQTELITALLAEIKELENSFCTRNTESTRKAREEAKEKYERYQEQQTDAEQRL DNDRKLSSEQRQDLKRLWRQASRLCHPDLVADAFKEKAHQLMVQLNQARQRGDFPAIHALLESLKQGLEPLMASDLIDDL ERLRRKISDVRTQIDAILHEIDALKGEESWRLATSLPDKDKWFKEQENVLSKTLNILERQVEEASRVLYEA
Specific function: Unknown
COG id: COG1076
COG function: function code O; DnaJ-domain-containing proteins 1
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45864; Mature: 45864
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLIKRLEIIKSGIELEDDDIIRHQLPYLKSETQDPVLVFIVMAIEQGKFTQALDAIAT CHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHH WLGSKQGVIQWQDIELAACKLELKALEEQLSELIDKRNERIQLLDDFNDLYLVRLGPLMK HHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHH QILNLRRQLAESTLRKAEAEARRRERDYRNCQQYISQAIDELISLKQRWLALPSISNDTI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH EIRNRIQQQTELITALLAEIKELENSFCTRNTESTRKAREEAKEKYERYQEQQTDAEQRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHC DNDRKLSSEQRQDLKRLWRQASRLCHPDLVADAFKEKAHQLMVQLNQARQRGDFPAIHAL CCHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LESLKQGLEPLMASDLIDDLERLRRKISDVRTQIDAILHEIDALKGEESWRLATSLPDKD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCHH KWFKEQENVLSKTLNILERQVEEASRVLYEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKKLIKRLEIIKSGIELEDDDIIRHQLPYLKSETQDPVLVFIVMAIEQGKFTQALDAIAT CHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHH WLGSKQGVIQWQDIELAACKLELKALEEQLSELIDKRNERIQLLDDFNDLYLVRLGPLMK HHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHH QILNLRRQLAESTLRKAEAEARRRERDYRNCQQYISQAIDELISLKQRWLALPSISNDTI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH EIRNRIQQQTELITALLAEIKELENSFCTRNTESTRKAREEAKEKYERYQEQQTDAEQRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHC DNDRKLSSEQRQDLKRLWRQASRLCHPDLVADAFKEKAHQLMVQLNQARQRGDFPAIHAL CCHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LESLKQGLEPLMASDLIDDLERLRRKISDVRTQIDAILHEIDALKGEESWRLATSLPDKD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCHH KWFKEQENVLSKTLNILERQVEEASRVLYEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA