| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153946938
Identifier: 153946938
GI number: 153946938
Start: 936427
End: 937113
Strand: Direct
Name: 153946938
Synonym: YpsIP31758_0780
Alternate gene names: NA
Gene position: 936427-937113 (Clockwise)
Preceding gene: 153949312
Following gene: 153950607
Centisome position: 19.83
GC content: 55.02
Gene sequence:
>687_bases ATGAACCATCAAATAACTGAACACTCCCCTACGGGGAATATTGATGCATTACTACAGGATACCTGGCTGCAGGTGATCAG CCTGCGTCAGGGAATGGCCTGCTCCGAAGGCGAAGGGCAGGCATTTTGGCAACGCTGTGTGGCAGACATTGAACGTGTCC ATCAGGCGCTGAAAGATGCCGGCCACAGCGAACAGAGTTGCCAGCACATCAGGTACGCACAATGTGCTCTGCTGGATGAA ACTGTGAAAGGCCGCGGTGTACAGGATGATGCCTACTTTGTATGGTGTCACTCGCCCTTGCAGGCGCATTTTTTCAACAC TCTAGATGCCGGTAACCAACTTTATGAGCGGATGCGCACCGTGTTGCGTGAGCCCGCACCCGATAGTGCAGTACTGACCT GTTTTCACCGGGTGTTGATGTTGGGGTTCCTCGGGGGATATCGCTCTGTTGCGGTACCTGAACGAGAACAACTGGTTAGC CAACTGACGGCACGGGTGCCGGCGTTCAGCTTTTTACCATCACGAGGGATCTTGGCAACAGCCTCATCCCGTAACCGTCT TGGGGTCTGGCTGCGTTACTGGCCAGTGCGACTGGGGTTGGCTGCGCTGATGGTCGCGCTGCTGTGGTGGGGTCTTGACC ACTGGCTATCTGGTTTGTTACTGACATTGTTACCGGGGCCAATGTGA
Upstream 100 bases:
>100_bases ACCCTGCTGCGAAGCAGATGATGGAGGCAGGGGCTTGTGTGTTCTATGTGCCTGGTACGCTGGGTGAGATCCAACTGGAA TTGTTTGCGGTGTTGCGCGC
Downstream 100 bases:
>100_bases TGAGTCCGTTGTGGCGATATGGGTTATGGCTATGGGCGGGTCTTCTGGCGGGCATATTGTGTCTGGCGTTCTTGCCTTTC TCCCCGTTAGTCGGCTGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MNHQITEHSPTGNIDALLQDTWLQVISLRQGMACSEGEGQAFWQRCVADIERVHQALKDAGHSEQSCQHIRYAQCALLDE TVKGRGVQDDAYFVWCHSPLQAHFFNTLDAGNQLYERMRTVLREPAPDSAVLTCFHRVLMLGFLGGYRSVAVPEREQLVS QLTARVPAFSFLPSRGILATASSRNRLGVWLRYWPVRLGLAALMVALLWWGLDHWLSGLLLTLLPGPM
Sequences:
>Translated_228_residues MNHQITEHSPTGNIDALLQDTWLQVISLRQGMACSEGEGQAFWQRCVADIERVHQALKDAGHSEQSCQHIRYAQCALLDE TVKGRGVQDDAYFVWCHSPLQAHFFNTLDAGNQLYERMRTVLREPAPDSAVLTCFHRVLMLGFLGGYRSVAVPEREQLVS QLTARVPAFSFLPSRGILATASSRNRLGVWLRYWPVRLGLAALMVALLWWGLDHWLSGLLLTLLPGPM >Mature_228_residues MNHQITEHSPTGNIDALLQDTWLQVISLRQGMACSEGEGQAFWQRCVADIERVHQALKDAGHSEQSCQHIRYAQCALLDE TVKGRGVQDDAYFVWCHSPLQAHFFNTLDAGNQLYERMRTVLREPAPDSAVLTCFHRVLMLGFLGGYRSVAVPEREQLVS QLTARVPAFSFLPSRGILATASSRNRLGVWLRYWPVRLGLAALMVALLWWGLDHWLSGLLLTLLPGPM
Specific function: Unknown
COG id: COG3455
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25651; Mature: 25651
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHQITEHSPTGNIDALLQDTWLQVISLRQGMACSEGEGQAFWQRCVADIERVHQALKDA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC GHSEQSCQHIRYAQCALLDETVKGRGVQDDAYFVWCHSPLQAHFFNTLDAGNQLYERMRT CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHCCHHHHHHHHHH VLREPAPDSAVLTCFHRVLMLGFLGGYRSVAVPEREQLVSQLTARVPAFSFLPSRGILAT HHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCEEEE ASSRNRLGVWLRYWPVRLGLAALMVALLWWGLDHWLSGLLLTLLPGPM CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNHQITEHSPTGNIDALLQDTWLQVISLRQGMACSEGEGQAFWQRCVADIERVHQALKDA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC GHSEQSCQHIRYAQCALLDETVKGRGVQDDAYFVWCHSPLQAHFFNTLDAGNQLYERMRT CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHCCHHHHHHHHHH VLREPAPDSAVLTCFHRVLMLGFLGGYRSVAVPEREQLVSQLTARVPAFSFLPSRGILAT HHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCEEEE ASSRNRLGVWLRYWPVRLGLAALMVALLWWGLDHWLSGLLLTLLPGPM CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA