| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153946896
Identifier: 153946896
GI number: 153946896
Start: 281417
End: 282103
Strand: Reverse
Name: 153946896
Synonym: YpsIP31758_0253
Alternate gene names: NA
Gene position: 282103-281417 (Counterclockwise)
Preceding gene: 153947183
Following gene: 153948341
Centisome position: 5.97
GC content: 50.07
Gene sequence:
>687_bases ATGAAATACCTTTATTCGATACTCAGCATCGCGCTGTTACTGGCCCCTGGTACTGCCACTTACGGACAACTGCTTGCTAC CCCCACCCGTATTGCGGTAGAGGCACAAGAGCAGAAGCGAACCGTACAGGTGTATAACAGCGGCGATACACCGCTTTATC TGGATATCACATTACAACGTGTGGATAACCCAGGCGTGAACCCCGAGCGTAAAACACCCATCAGTGAAATCTCTCAGCCT GAAATGATTTTTAATCCTAACCGCATTACGTTAGGGCCGAGACAAAAGCGGGATATTACGCTTATCCCACTCAAATCGCC GGTACAGGAAACCCTTTACCGCCTGTATATCAACCCCGTGCTCAATATCAAAGCGGTTGGCGATGGGGAGGATAAAAGTA AAGTTCATGCCCCAATGACCATCAGTATTGGTTATGGCGTGCTGATTCATCATTTGCCACCGGCTGCTGCACAAACTCGT CATTGGCAACATCAATGCTCAGCTACTGGCGAGCTAACACTCACCGCTACCGGAACGGTGCACAGTAAGTTTAAGCAGCT CGAATCGGGCGGTAACCCCGCACTGGTCGACAGTCTAAATCTGTATCCGGGCACCGCGCTCACACTGCCCTTCAAACAAC TCAATGGTGAGGTGGACGGTGAAAAATTTAGTCTTCGCTGCCATTAG
Upstream 100 bases:
>100_bases TAACCGTCCAAGGCCCTTCTGGCCGTTACCGCTGTGATATGCATTCGCAACCTACTCATATTTACCTTTGCCACGCCGAT TAATACCGATAGGAACCCTC
Downstream 100 bases:
>100_bases CCTCTTGCCGCTCAGTGCCGCTGGCGTGATCGATATTCAGCCACAGGTCGTGGAACTACAGCAGGCGAATACTGTGGTTA CCGTGATCAACCATGGCATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MKYLYSILSIALLLAPGTATYGQLLATPTRIAVEAQEQKRTVQVYNSGDTPLYLDITLQRVDNPGVNPERKTPISEISQP EMIFNPNRITLGPRQKRDITLIPLKSPVQETLYRLYINPVLNIKAVGDGEDKSKVHAPMTISIGYGVLIHHLPPAAAQTR HWQHQCSATGELTLTATGTVHSKFKQLESGGNPALVDSLNLYPGTALTLPFKQLNGEVDGEKFSLRCH
Sequences:
>Translated_228_residues MKYLYSILSIALLLAPGTATYGQLLATPTRIAVEAQEQKRTVQVYNSGDTPLYLDITLQRVDNPGVNPERKTPISEISQP EMIFNPNRITLGPRQKRDITLIPLKSPVQETLYRLYINPVLNIKAVGDGEDKSKVHAPMTISIGYGVLIHHLPPAAAQTR HWQHQCSATGELTLTATGTVHSKFKQLESGGNPALVDSLNLYPGTALTLPFKQLNGEVDGEKFSLRCH >Mature_228_residues MKYLYSILSIALLLAPGTATYGQLLATPTRIAVEAQEQKRTVQVYNSGDTPLYLDITLQRVDNPGVNPERKTPISEISQP EMIFNPNRITLGPRQKRDITLIPLKSPVQETLYRLYINPVLNIKAVGDGEDKSKVHAPMTISIGYGVLIHHLPPAAAQTR HWQHQCSATGELTLTATGTVHSKFKQLESGGNPALVDSLNLYPGTALTLPFKQLNGEVDGEKFSLRCH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25105; Mature: 25105
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYLYSILSIALLLAPGTATYGQLLATPTRIAVEAQEQKRTVQVYNSGDTPLYLDITLQR CHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEEEECCCCCEEEEEECCCCEEEEEEEEEE VDNPGVNPERKTPISEISQPEMIFNPNRITLGPRQKRDITLIPLKSPVQETLYRLYINPV CCCCCCCCCCCCCHHHCCCCCEEECCCEEEECCCCCCCEEEEECCCCHHHHHHHHHCCCE LNIKAVGDGEDKSKVHAPMTISIGYGVLIHHLPPAAAQTRHWQHQCSATGELTLTATGTV EEEEEECCCCCCCEEECCEEEEECCEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCH HSKFKQLESGGNPALVDSLNLYPGTALTLPFKQLNGEVDGEKFSLRCH HHHHHHHHCCCCCEEEECEECCCCCEEEEEHHHHCCCCCCCEEEEEEC >Mature Secondary Structure MKYLYSILSIALLLAPGTATYGQLLATPTRIAVEAQEQKRTVQVYNSGDTPLYLDITLQR CHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEEEECCCCCEEEEEECCCCEEEEEEEEEE VDNPGVNPERKTPISEISQPEMIFNPNRITLGPRQKRDITLIPLKSPVQETLYRLYINPV CCCCCCCCCCCCCHHHCCCCCEEECCCEEEECCCCCCCEEEEECCCCHHHHHHHHHCCCE LNIKAVGDGEDKSKVHAPMTISIGYGVLIHHLPPAAAQTRHWQHQCSATGELTLTATGTV EEEEEECCCCCCCEEECCEEEEECCEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCH HSKFKQLESGGNPALVDSLNLYPGTALTLPFKQLNGEVDGEKFSLRCH HHHHHHHHCCCCCEEEECEECCCCCEEEEEHHHHCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA