| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153947183
Identifier: 153947183
GI number: 153947183
Start: 282121
End: 284436
Strand: Reverse
Name: 153947183
Synonym: YpsIP31758_0254
Alternate gene names: NA
Gene position: 284436-282121 (Counterclockwise)
Preceding gene: 153949707
Following gene: 153946896
Centisome position: 6.02
GC content: 47.8
Gene sequence:
>2316_bases ATGGCCTATTATTCAAAAATTAATCATAGCTTACTTTTTACTTTAGCCTTATTCACACTAAAGCTCGCTCATGCAGAAGC AGTTAAAATAGAGTATTTAGTGCCAATGGGGTTTTCCGCGGCTGAAGAGAACAACTCACTTCAGTTATTAGGGGTATTAG ACAGTAAGACATTGCCCAGCCCTATTACCTTCTCAGAAGAAAAACAACAACTGCAATTTAATCAACAGAACTATCGGCAT AATAATATTAGTGAAGAATCTATTATTTTATTGGGAGAGATATTATCTCAAATACCGTATTTACAGTGTAAAACCGGCTG TGATTATACTTTATCGGGTCACCGCGTGGCGTTAGATAAAGTGAATAACACATTGACGATCACCAATAATAATAATCGTT ATCTGATGCCAACCACGACATGGGGGTTGGTCAGCAATCAATCTCTCGATTTGCGAATGACAGCAGCCCACTATCGGGCG ATGTCAGTCCGTGGTCAAAGTTACATCGGCTTGCCATGGCAATCTTATGGCTTTGCATCTTGGTTTTATAACGCGATTCA GTCACAGAATACGCTGCAATCACAGAGCACCTATCAGCCCGTTAATCGCCCTCAATATCAGCGCCTAACCCAAAAAGGGA TCGGCAGTTGGTATTTGCAAAAGAACTTCTCGGCACTCTATTTACGCACCGGTCGGCAAAACAACCTGGATAACAACGCA GGTAGCGTTCACACCCTGATCAACCCTGCGTTGGACCAATTTGTAACACTCGGTAGTCAAAGCTATCTGGTCATCGATAA GCCCTCCACTGGCAGTATCGTGCTCTATGCCGCTCAAGATGGTGACTACGAAATATACCGTGATAATCAGCTCATTCGCC GCATCCCCGCTCAATTGGGTCGCAACGAGATAGATTACAGCCAACTACCAGGGGGCTATTACAACGTTGAGATTCGTTTA GTTGATCGTCTTGGGCGGATCGTCAGCCAGGAAAACCAAACCATCAGCAATATTGGCAATCAGACCAATAATGGTTGGTT TCTGACAATGGGTAAAGGGCCAGCCAAGGGTAAAAAAACGCCCCGTTTAGTCCAGTTTGGACGCAGTAGGGTGATAGAAA GCGTACAAACCAATATCACGCTACTCAAAGATGATGCCCATCACTGGGCCGTGGAAGCGAACGTCTCACGCCCTTTAAGC CTCAATAAGGTGAATATCACCCCAACAGGGGGCTTGATGTCAGGAGAGAAACGCAGTGGAGGTTACGTTCGCTTAAATGG CGGCAACAATACACTGGGTTACTTTTCATTAGCTCGCTATCAGTCACCTTATGTCTCGCGATACGCACCTGACTCTGGCA GTACCTCAGGCTCCTATACCCGGCGTATTGGGCCAACCCAACTAAGTTATCAATTCAATCAATACCGCAATAACCGGCAA CACCGTATCCAAAGTGGTTGGGACTGGCAATTACCACAATTTAACCTCGCGTTATCCCTTGGGCTGCAAAATGGTGGGCA ATGGAACAGCCACAATAATTACGGCGTATTCCTGAACACCACCCTGTCCTTCGGCCAAAGTAACGCCAGCATCAATACGG CTTATACCCAACAACAGTTGAACACCAGCGCCAGTTACCAGAAAGAGTTTATTGATAACTATGGGGCCAGCACTTTGGGT GTCAGTGGTAGTGCCAGCGGGAAACTAAATAGCGTCGGCGGTTTTGCTAAACGCAGCGGGAGCCGGGGGGATATCTCTGG CCGGGTAGGCATTGATAACCAGATAACCAACGGGGGGATTAGCTATAACGGCATGTTGGCACTCAGCTCACAGGGGGTTG CCTTGGGGCGCAGCAGTTATAGCGGAGCGGCACTCTTGATCAAAGCCCCCGCTCTGGGCGGTACCCCCTATAGTTTTCAT GTGGAGGATAGCCCAATAACCGGTGGTGGCACCTATGCGATACCGGTCCCCCGCTACCAAGACCGTTTCTTTGTCCGTAC TCACACCGACCGCAGTGATATGGATATGAATATTCAACTGCCGGTCAACATCGTACGCGCTCACCCTGGGCAAGTTTTTT CAGGCGAAGCTGACATCACATTGAACCTGCTATACAGCGGTTTTCTCAAAAATGCACAAGGGCTACCGGTGAGCGGGGTG ATTGAGGAGACGGGTGATACCGCTTATCCCAATGGGCTGTTTTCCATTAACGCCCAAAATAGGCTGCAAGCGATAACCGT CCAAGGCCCTTCTGGCCGTTACCGCTGTGATATGCATTCGCAACCTACTCATATTTACCTTTGCCACGCCGATTAA
Upstream 100 bases:
>100_bases CCTGCAATTCGAATTATTTTGGGTATATACACAAATTATTTCTTTTAAAAATAAATAATTATCCTGTAAAACCACCATAA TTATAGTGGAATGGAATCCT
Downstream 100 bases:
>100_bases TACCGATAGGAACCCTCATGAAATACCTTTATTCGATACTCAGCATCGCGCTGTTACTGGCCCCTGGTACTGCCACTTAC GGACAACTGCTTGCTACCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 771; Mature: 770
Protein sequence:
>771_residues MAYYSKINHSLLFTLALFTLKLAHAEAVKIEYLVPMGFSAAEENNSLQLLGVLDSKTLPSPITFSEEKQQLQFNQQNYRH NNISEESIILLGEILSQIPYLQCKTGCDYTLSGHRVALDKVNNTLTITNNNNRYLMPTTTWGLVSNQSLDLRMTAAHYRA MSVRGQSYIGLPWQSYGFASWFYNAIQSQNTLQSQSTYQPVNRPQYQRLTQKGIGSWYLQKNFSALYLRTGRQNNLDNNA GSVHTLINPALDQFVTLGSQSYLVIDKPSTGSIVLYAAQDGDYEIYRDNQLIRRIPAQLGRNEIDYSQLPGGYYNVEIRL VDRLGRIVSQENQTISNIGNQTNNGWFLTMGKGPAKGKKTPRLVQFGRSRVIESVQTNITLLKDDAHHWAVEANVSRPLS LNKVNITPTGGLMSGEKRSGGYVRLNGGNNTLGYFSLARYQSPYVSRYAPDSGSTSGSYTRRIGPTQLSYQFNQYRNNRQ HRIQSGWDWQLPQFNLALSLGLQNGGQWNSHNNYGVFLNTTLSFGQSNASINTAYTQQQLNTSASYQKEFIDNYGASTLG VSGSASGKLNSVGGFAKRSGSRGDISGRVGIDNQITNGGISYNGMLALSSQGVALGRSSYSGAALLIKAPALGGTPYSFH VEDSPITGGGTYAIPVPRYQDRFFVRTHTDRSDMDMNIQLPVNIVRAHPGQVFSGEADITLNLLYSGFLKNAQGLPVSGV IEETGDTAYPNGLFSINAQNRLQAITVQGPSGRYRCDMHSQPTHIYLCHAD
Sequences:
>Translated_771_residues MAYYSKINHSLLFTLALFTLKLAHAEAVKIEYLVPMGFSAAEENNSLQLLGVLDSKTLPSPITFSEEKQQLQFNQQNYRH NNISEESIILLGEILSQIPYLQCKTGCDYTLSGHRVALDKVNNTLTITNNNNRYLMPTTTWGLVSNQSLDLRMTAAHYRA MSVRGQSYIGLPWQSYGFASWFYNAIQSQNTLQSQSTYQPVNRPQYQRLTQKGIGSWYLQKNFSALYLRTGRQNNLDNNA GSVHTLINPALDQFVTLGSQSYLVIDKPSTGSIVLYAAQDGDYEIYRDNQLIRRIPAQLGRNEIDYSQLPGGYYNVEIRL VDRLGRIVSQENQTISNIGNQTNNGWFLTMGKGPAKGKKTPRLVQFGRSRVIESVQTNITLLKDDAHHWAVEANVSRPLS LNKVNITPTGGLMSGEKRSGGYVRLNGGNNTLGYFSLARYQSPYVSRYAPDSGSTSGSYTRRIGPTQLSYQFNQYRNNRQ HRIQSGWDWQLPQFNLALSLGLQNGGQWNSHNNYGVFLNTTLSFGQSNASINTAYTQQQLNTSASYQKEFIDNYGASTLG VSGSASGKLNSVGGFAKRSGSRGDISGRVGIDNQITNGGISYNGMLALSSQGVALGRSSYSGAALLIKAPALGGTPYSFH VEDSPITGGGTYAIPVPRYQDRFFVRTHTDRSDMDMNIQLPVNIVRAHPGQVFSGEADITLNLLYSGFLKNAQGLPVSGV IEETGDTAYPNGLFSINAQNRLQAITVQGPSGRYRCDMHSQPTHIYLCHAD >Mature_770_residues AYYSKINHSLLFTLALFTLKLAHAEAVKIEYLVPMGFSAAEENNSLQLLGVLDSKTLPSPITFSEEKQQLQFNQQNYRHN NISEESIILLGEILSQIPYLQCKTGCDYTLSGHRVALDKVNNTLTITNNNNRYLMPTTTWGLVSNQSLDLRMTAAHYRAM SVRGQSYIGLPWQSYGFASWFYNAIQSQNTLQSQSTYQPVNRPQYQRLTQKGIGSWYLQKNFSALYLRTGRQNNLDNNAG SVHTLINPALDQFVTLGSQSYLVIDKPSTGSIVLYAAQDGDYEIYRDNQLIRRIPAQLGRNEIDYSQLPGGYYNVEIRLV DRLGRIVSQENQTISNIGNQTNNGWFLTMGKGPAKGKKTPRLVQFGRSRVIESVQTNITLLKDDAHHWAVEANVSRPLSL NKVNITPTGGLMSGEKRSGGYVRLNGGNNTLGYFSLARYQSPYVSRYAPDSGSTSGSYTRRIGPTQLSYQFNQYRNNRQH RIQSGWDWQLPQFNLALSLGLQNGGQWNSHNNYGVFLNTTLSFGQSNASINTAYTQQQLNTSASYQKEFIDNYGASTLGV SGSASGKLNSVGGFAKRSGSRGDISGRVGIDNQITNGGISYNGMLALSSQGVALGRSSYSGAALLIKAPALGGTPYSFHV EDSPITGGGTYAIPVPRYQDRFFVRTHTDRSDMDMNIQLPVNIVRAHPGQVFSGEADITLNLLYSGFLKNAQGLPVSGVI EETGDTAYPNGLFSINAQNRLQAITVQGPSGRYRCDMHSQPTHIYLCHAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 85276; Mature: 85144
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYYSKINHSLLFTLALFTLKLAHAEAVKIEYLVPMGFSAAEENNSLQLLGVLDSKTLPS CCCHHHHCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCC PITFSEEKQQLQFNQQNYRHNNISEESIILLGEILSQIPYLQCKTGCDYTLSGHRVALDK CCCCCCHHHHHHHCHHHCCCCCCCCCCEEHHHHHHHHCCCEEECCCCCEEECCCEEEEEE VNNTLTITNNNNRYLMPTTTWGLVSNQSLDLRMTAAHYRAMSVRGQSYIGLPWQSYGFAS CCCEEEEEECCCEEEEEECEECEEECCCCEEEEEHHHEEEEEECCCEEECCCCCCCCHHH WFYNAIQSQNTLQSQSTYQPVNRPQYQRLTQKGIGSWYLQKNFSALYLRTGRQNNLDNNA HHHHHHHCCCHHCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCEEEEEECCCCCCCCCCC GSVHTLINPALDQFVTLGSQSYLVIDKPSTGSIVLYAAQDGDYEIYRDNQLIRRIPAQLG CCEEEHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEECCCCEEEEECCHHHHHHHHHHC RNEIDYSQLPGGYYNVEIRLVDRLGRIVSQENQTISNIGNQTNNGWFLTMGKGPAKGKKT CCCCCHHHCCCCEEEEEEEEHHHHHHHHCCCCCHHHHCCCCCCCCEEEEECCCCCCCCCC PRLVQFGRSRVIESVQTNITLLKDDAHHWAVEANVSRPLSLNKVNITPTGGLMSGEKRSG HHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCC GYVRLNGGNNTLGYFSLARYQSPYVSRYAPDSGSTSGSYTRRIGPTQLSYQFNQYRNNRQ CEEEECCCCCCEEEEEEEHHCCCCHHEECCCCCCCCCCEEEECCCCEEEEEHHHHCCCCH HRIQSGWDWQLPQFNLALSLGLQNGGQWNSHNNYGVFLNTTLSFGQSNASINTAYTQQQL HCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCEEEEHHHHHHH NTSASYQKEFIDNYGASTLGVSGSASGKLNSVGGFAKRSGSRGDISGRVGIDNQITNGGI CCCHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCHHHCCCCCCCCCEEECCCCCCCCCCC SYNGMLALSSQGVALGRSSYSGAALLIKAPALGGTPYSFHVEDSPITGGGTYAIPVPRYQ CCCEEEEECCCCEEEECCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCEEEEECCCCC DRFFVRTHTDRSDMDMNIQLPVNIVRAHPGQVFSGEADITLNLLYSGFLKNAQGLPVSGV CEEEEEEECCCCCCCEEEEECEEEEECCCCCEECCCCCEEEEEEHHHHHCCCCCCCCCCC IEETGDTAYPNGLFSINAQNRLQAITVQGPSGRYRCDMHSQPTHIYLCHAD CCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCEEECCCCCCCEEEEEECC >Mature Secondary Structure AYYSKINHSLLFTLALFTLKLAHAEAVKIEYLVPMGFSAAEENNSLQLLGVLDSKTLPS CCHHHHCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCC PITFSEEKQQLQFNQQNYRHNNISEESIILLGEILSQIPYLQCKTGCDYTLSGHRVALDK CCCCCCHHHHHHHCHHHCCCCCCCCCCEEHHHHHHHHCCCEEECCCCCEEECCCEEEEEE VNNTLTITNNNNRYLMPTTTWGLVSNQSLDLRMTAAHYRAMSVRGQSYIGLPWQSYGFAS CCCEEEEEECCCEEEEEECEECEEECCCCEEEEEHHHEEEEEECCCEEECCCCCCCCHHH WFYNAIQSQNTLQSQSTYQPVNRPQYQRLTQKGIGSWYLQKNFSALYLRTGRQNNLDNNA HHHHHHHCCCHHCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCEEEEEECCCCCCCCCCC GSVHTLINPALDQFVTLGSQSYLVIDKPSTGSIVLYAAQDGDYEIYRDNQLIRRIPAQLG CCEEEHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEECCCCEEEEECCHHHHHHHHHHC RNEIDYSQLPGGYYNVEIRLVDRLGRIVSQENQTISNIGNQTNNGWFLTMGKGPAKGKKT CCCCCHHHCCCCEEEEEEEEHHHHHHHHCCCCCHHHHCCCCCCCCEEEEECCCCCCCCCC PRLVQFGRSRVIESVQTNITLLKDDAHHWAVEANVSRPLSLNKVNITPTGGLMSGEKRSG HHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCC GYVRLNGGNNTLGYFSLARYQSPYVSRYAPDSGSTSGSYTRRIGPTQLSYQFNQYRNNRQ CEEEECCCCCCEEEEEEEHHCCCCHHEECCCCCCCCCCEEEECCCCEEEEEHHHHCCCCH HRIQSGWDWQLPQFNLALSLGLQNGGQWNSHNNYGVFLNTTLSFGQSNASINTAYTQQQL HCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCEEEEHHHHHHH NTSASYQKEFIDNYGASTLGVSGSASGKLNSVGGFAKRSGSRGDISGRVGIDNQITNGGI CCCHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCHHHCCCCCCCCCEEECCCCCCCCCCC SYNGMLALSSQGVALGRSSYSGAALLIKAPALGGTPYSFHVEDSPITGGGTYAIPVPRYQ CCCEEEEECCCCEEEECCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCEEEEECCCCC DRFFVRTHTDRSDMDMNIQLPVNIVRAHPGQVFSGEADITLNLLYSGFLKNAQGLPVSGV CEEEEEEECCCCCCCEEEEECEEEEECCCCCEECCCCCEEEEEEHHHHHCCCCCCCCCCC IEETGDTAYPNGLFSINAQNRLQAITVQGPSGRYRCDMHSQPTHIYLCHAD CCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCEEECCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA