Click here to switch to the map view.

The map label for this gene is 153946842

Identifier: 153946842

GI number: 153946842

Start: 3652765

End: 3654189

Strand: Reverse

Name: 153946842

Synonym: YpsIP31758_3246

Alternate gene names: NA

Gene position: 3654189-3652765 (Counterclockwise)

Preceding gene: 153950616

Following gene: 153949415

Centisome position: 77.37

GC content: 50.04

Gene sequence:

>1425_bases
ATGTCAGCAATACCTCGCAAGTTAACTTTTGCGGTGATTATCGGCAATCGGGGTTTCTTCCCAAGCTATCTGGTGAGCGA
CGCGCGCCGGGATGCTCAGGCGCTCTTTGACCGGCTGGGGATTAACATCATTATGCTTAATGAAGAGCAAACGCCACTGG
GAGGTGTGGAAAATTGGCGTGATGCCAAGGTGTGCGCTGAATTATTCCGTCAACACAGTGAAGAGATCCACGGTGTGGTT
GTTATTCTGCCCAATTTTGGCGATGAGAAAAGTGTCTCTGATGCGATCCGTTTATCTGGCCTGAAAGTGCCGGTCCTGGT
GCAGGCAGAAGAAGATGCGCTGGATAAAATGGGGCTGGCAACCCGCCGTGACAGTTTCTGCGGCAAGATTTCATTGTGTA
ATAACCTACGCCAATACGGCATTCCTTTCACCTTGACCAAACAGCATGTCTGTAGCCTGAACAGTGAGATATTCAGCCGC
GATGTCGAGCAATTTGTGCAGTTGTGTCGTGTCGTACATGCCATGAAACGGGTACGGGTTGGGGCTATTGGTGCCCGTCC
GACCAATTTTAATACTGTACGCTACAGTGAGAAGTTATTGGAGAATTTGGGGATCACCGTAGAAACCCTCGATTTATCCG
AGGTGTTTTTCCGGGTGGCTAATCTCAGTGATAACGATATCCGCGTCGGCGAAAAACTGGCATTACTGAAAGCCAATGGG
GATACCAGCACTATCCCACAAGACAAACTGCATAAAATGGCGAAGTTGTTTGTGGTGATCAGTGAATGGATTATTGCTAA
TGATATTGATACCACGGCGATGCAATGTTGGACGTCGCTGCAGCAGAACTTGGGAATCAACGTCTGTTCCATTATGAGCG
TAATGTCGGGGCAATTGATGCCAAGTGCCTGTGAAGTGGATGTGATGGGCGCGTTATCGATGTATGCGTTGGCCAGTTGC
TCGCTGGCACCGGCATCCATCGCCGACTGGAATAATAACTTTGGCGCTGAACGAGATAAATGTGTGCTATTCCACTGCGG
CAACTTTGCCAGTGAAAGTCTGGAGAGCTCAACCATGGGCACCGCTGATATTATCGGGACAACGGTGGGGTGTGAGAATA
CCTGTGGCGCAGTTCATGGCCGGATGAAGTCGGGGCCATTGACCTATTTCCGCCTCTCTTCTGATGATTTTACGGGGCAG
GTCCGGGCTTATGTTGGCGAAGGGCGCTCTGTCAGTGACGAGTTGAATACAGTGGGCTGTCGGGCCGTGGTGGAAGTACC
ACAGTTGGAAAGTTTGCTCACGCATATTTGCAACAACGGTTTTGAACACCATGTGGCCATGAACCATTCAGCTACAGCTC
AGGTTTTGCAAGAAGCATTCAGTAAATATCTGGGCGTTGATTGCTACTGGCATGGGAAGCCGTGA

Upstream 100 bases:

>100_bases
GCATTCACAGTGCGGAGATGCAAGATAACTATAGCCTCTGGCAAACGGCCATCGCGCGTGCGCGTTTTCAGCCGAAATAA
CCCACACTAGGAGTAAGCAT

Downstream 100 bases:

>100_bases
AACGGAGGCCAGCAGCCGGTGATGGGGCAATGAGATAACCCGCGGCGTAACACGCCAGTTGTCTATGCCCTAAAATAACG
AGGCTAATGGCACCGGGATC

Product: fucose isomerase domain-containing protein

Products: NA

Alternate protein names: L-Fucose Isomerase Related Protein; L-Fucose Isomerase; L-Fucose Isomerase Domain-Containing Protein; L-Fucose Isomerase C-Terminal Domain Protein; L-Fucose Isomerase C-Terminal; L-Fucose Isomerase-Like; L-Fucose Isomerase _2 Domain Protein; L-Fucose Isomerase-Like Protein Protein

Number of amino acids: Translated: 474; Mature: 473

Protein sequence:

>474_residues
MSAIPRKLTFAVIIGNRGFFPSYLVSDARRDAQALFDRLGINIIMLNEEQTPLGGVENWRDAKVCAELFRQHSEEIHGVV
VILPNFGDEKSVSDAIRLSGLKVPVLVQAEEDALDKMGLATRRDSFCGKISLCNNLRQYGIPFTLTKQHVCSLNSEIFSR
DVEQFVQLCRVVHAMKRVRVGAIGARPTNFNTVRYSEKLLENLGITVETLDLSEVFFRVANLSDNDIRVGEKLALLKANG
DTSTIPQDKLHKMAKLFVVISEWIIANDIDTTAMQCWTSLQQNLGINVCSIMSVMSGQLMPSACEVDVMGALSMYALASC
SLAPASIADWNNNFGAERDKCVLFHCGNFASESLESSTMGTADIIGTTVGCENTCGAVHGRMKSGPLTYFRLSSDDFTGQ
VRAYVGEGRSVSDELNTVGCRAVVEVPQLESLLTHICNNGFEHHVAMNHSATAQVLQEAFSKYLGVDCYWHGKP

Sequences:

>Translated_474_residues
MSAIPRKLTFAVIIGNRGFFPSYLVSDARRDAQALFDRLGINIIMLNEEQTPLGGVENWRDAKVCAELFRQHSEEIHGVV
VILPNFGDEKSVSDAIRLSGLKVPVLVQAEEDALDKMGLATRRDSFCGKISLCNNLRQYGIPFTLTKQHVCSLNSEIFSR
DVEQFVQLCRVVHAMKRVRVGAIGARPTNFNTVRYSEKLLENLGITVETLDLSEVFFRVANLSDNDIRVGEKLALLKANG
DTSTIPQDKLHKMAKLFVVISEWIIANDIDTTAMQCWTSLQQNLGINVCSIMSVMSGQLMPSACEVDVMGALSMYALASC
SLAPASIADWNNNFGAERDKCVLFHCGNFASESLESSTMGTADIIGTTVGCENTCGAVHGRMKSGPLTYFRLSSDDFTGQ
VRAYVGEGRSVSDELNTVGCRAVVEVPQLESLLTHICNNGFEHHVAMNHSATAQVLQEAFSKYLGVDCYWHGKP
>Mature_473_residues
SAIPRKLTFAVIIGNRGFFPSYLVSDARRDAQALFDRLGINIIMLNEEQTPLGGVENWRDAKVCAELFRQHSEEIHGVVV
ILPNFGDEKSVSDAIRLSGLKVPVLVQAEEDALDKMGLATRRDSFCGKISLCNNLRQYGIPFTLTKQHVCSLNSEIFSRD
VEQFVQLCRVVHAMKRVRVGAIGARPTNFNTVRYSEKLLENLGITVETLDLSEVFFRVANLSDNDIRVGEKLALLKANGD
TSTIPQDKLHKMAKLFVVISEWIIANDIDTTAMQCWTSLQQNLGINVCSIMSVMSGQLMPSACEVDVMGALSMYALASCS
LAPASIADWNNNFGAERDKCVLFHCGNFASESLESSTMGTADIIGTTVGCENTCGAVHGRMKSGPLTYFRLSSDDFTGQV
RAYVGEGRSVSDELNTVGCRAVVEVPQLESLLTHICNNGFEHHVAMNHSATAQVLQEAFSKYLGVDCYWHGKP

Specific function: Unknown

COG id: COG2407

COG function: function code G; L-fucose isomerase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52093; Mature: 51962

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAIPRKLTFAVIIGNRGFFPSYLVSDARRDAQALFDRLGINIIMLNEEQTPLGGVENWR
CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCH
DAKVCAELFRQHSEEIHGVVVILPNFGDEKSVSDAIRLSGLKVPVLVQAEEDALDKMGLA
HHHHHHHHHHHHHHHHCEEEEEECCCCCCCHHHHHHHHCCCCCEEEEECCHHHHHHHCCC
TRRDSFCGKISLCNNLRQYGIPFTLTKQHVCSLNSEIFSRDVEQFVQLCRVVHAMKRVRV
CCCHHHCCHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAIGARPTNFNTVRYSEKLLENLGITVETLDLSEVFFRVANLSDNDIRVGEKLALLKANG
CEECCCCCCCCHHHHHHHHHHHCCCEEEEECHHHHHHHHHCCCCCCEECCCEEEEEEECC
DTSTIPQDKLHKMAKLFVVISEWIIANDIDTTAMQCWTSLQQNLGINVCSIMSVMSGQLM
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC
PSACEVDVMGALSMYALASCSLAPASIADWNNNFGAERDKCVLFHCGNFASESLESSTMG
CCCCCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCC
TADIIGTTVGCENTCGAVHGRMKSGPLTYFRLSSDDFTGQVRAYVGEGRSVSDELNTVGC
CHHHHEECCCCCCCCHHHCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHCC
RAVVEVPQLESLLTHICNNGFEHHVAMNHSATAQVLQEAFSKYLGVDCYWHGKP
HHEECCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHCCEEEECCCC
>Mature Secondary Structure 
SAIPRKLTFAVIIGNRGFFPSYLVSDARRDAQALFDRLGINIIMLNEEQTPLGGVENWR
CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCH
DAKVCAELFRQHSEEIHGVVVILPNFGDEKSVSDAIRLSGLKVPVLVQAEEDALDKMGLA
HHHHHHHHHHHHHHHHCEEEEEECCCCCCCHHHHHHHHCCCCCEEEEECCHHHHHHHCCC
TRRDSFCGKISLCNNLRQYGIPFTLTKQHVCSLNSEIFSRDVEQFVQLCRVVHAMKRVRV
CCCHHHCCHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAIGARPTNFNTVRYSEKLLENLGITVETLDLSEVFFRVANLSDNDIRVGEKLALLKANG
CEECCCCCCCCHHHHHHHHHHHCCCEEEEECHHHHHHHHHCCCCCCEECCCEEEEEEECC
DTSTIPQDKLHKMAKLFVVISEWIIANDIDTTAMQCWTSLQQNLGINVCSIMSVMSGQLM
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC
PSACEVDVMGALSMYALASCSLAPASIADWNNNFGAERDKCVLFHCGNFASESLESSTMG
CCCCCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCC
TADIIGTTVGCENTCGAVHGRMKSGPLTYFRLSSDDFTGQVRAYVGEGRSVSDELNTVGC
CHHHHEECCCCCCCCHHHCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHCC
RAVVEVPQLESLLTHICNNGFEHHVAMNHSATAQVLQEAFSKYLGVDCYWHGKP
HHEECCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA