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The map label for this gene is 153952566

Identifier: 153952566

GI number: 153952566

Start: 706934

End: 708505

Strand: Direct

Name: 153952566

Synonym: JJD26997_0782

Alternate gene names: NA

Gene position: 706934-708505 (Clockwise)

Preceding gene: 153951199

Following gene: 153951587

Centisome position: 38.31

GC content: 27.29

Gene sequence:

>1572_bases
ATGAAAAAAATTATTATTTTAACTTTTTTTGTTGTTTTTGCTTTTGGTGATGTAAATCGGACTATTATTAATAATATAAA
TGAGAAAATTAATACTTTAAATACTGTAATCAGTGCTAGTATTTGGAATATACGTTATGAAAATTTTATAAAATATCAAG
ATATAAATGATGAATTAATCATTTTAAATCTTAATTTAAAAAAGACTTCCGATATTCACCAACAAGAAGAACTTAAACGT
AAGATAGCAAATTTAGAAGAGCAATTGAGTTTGCTTAAAGAATATAAAGATTTAAATTTTGCACAAAGTCTTAGTGCCCC
TGATAATATAGAAACCTTATCTAAACTTACTAATCCTTTGGCTATTATAGGAGCTTTTTCTCATATTAAGAAATTAAAAG
GAGAAAAGGAAGAGTATATATTTAAATTTAATGATTTTAAAAATTTAGTAGATAAAATTAGAGAAAAAAACTCAGAACTT
AGAGAATTAGTTGAGCTTAAACCAAGTGTTGAGAATATAGAAGCTTTAAAAGCTTCGGATAAAAAGTTGGAAGAATTTGA
GCAAGCTTTAAATTTTGCTAGTGTTTCTTATTCTGTTTATGAGAAAAAAATTGATGAAGAGCTTTCTCGAGTAAGTGCTG
AGATTAAAGTTCAAAGCTTAAGGGCTGTAAATATACTTGTTGCTATTGCTATTGTTATAGCTATAGCTTTTATGTTGAAA
TTTATTGCTAAAAAATACATTAAAGATAGTGAAAGATATTATACCGCTACGAAGATTATTAATTTTATTAATATAAATAT
TATTTTTCTTATTTTACTCTTTGCTTATATAGAAAATATTACTTATCTTGTAACTATACTTGGTTTTGCTTCTGCAGGCT
TAGCTATTGCTATGAAAGATATGTTTATGTCTATGCTTGGATGGTGTGTGATTATTTTTGGTGGAAGTTTTAGAGTAGGA
GATCGTGTAAAGGTTTTTCAAAATGATACTACCTATATAGGAGATATTATAGATATTTCTTTTTTGCGTATTACTCTTTA
TGAAGAGCTTACGCTTGAAACTTATAGTAAAAATCGTCGTAGTGGGCGTATTATATTTATTCCTAATAACTATGTTTTTA
CAAATTTGCTTGCTAATTATACTCATCATGGTATGAAAACCGTGCTTGATGGCATTGATATAAGTGTTACTTTTGATAGC
AATCTTGACAAGGCACAAGAAATTGTAGAAAATATTGTTATACGCCATGCCAAAGGTTATACTGAGCTTGCTAGAAAAAA
TATAGCTCGTTTACAACATGAATATAGTATTAAAAATCCTAAGGTGGAGCCAAGGTTTTTTATGTTTTTTGAACATTGGG
GAATGCGAATTTCTGCATGGTATATGACTAATGCTTATGCGGCTTTGGTATTAAGAAGTACGATTAGCAAAGAGATTATA
GAAGAATTTAATAAGCATAAAGATATAAAAATCGCTTATCCATCGCAAAATTTATATTTAGGAAATTTAAACCAAAATCA
TTTTGAACAACATCATGAAAATACGCATTTTCATGCAAGGAATAAAGATTGA

Upstream 100 bases:

>100_bases
ATAAAAAAATCAATTTTGTTCTTGCTAGTCCTTTGGGTAAGGGTTTGATAAAAGGCGATATTTCTAAAGAAGATATAATT
ACAACTTTAAGAGAATTCCA

Downstream 100 bases:

>100_bases
AAGAAAAAGTTTTCTTTAAAACCTTTGGGTGTCGCACAAATATTTATGATACAGAGCTTTTAAAAAGTTATGTAAAAGAT
TATGAGATTATAAATGATGA

Product: mechanosensitive ion channel family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 523; Mature: 523

Protein sequence:

>523_residues
MKKIIILTFFVVFAFGDVNRTIINNINEKINTLNTVISASIWNIRYENFIKYQDINDELIILNLNLKKTSDIHQQEELKR
KIANLEEQLSLLKEYKDLNFAQSLSAPDNIETLSKLTNPLAIIGAFSHIKKLKGEKEEYIFKFNDFKNLVDKIREKNSEL
RELVELKPSVENIEALKASDKKLEEFEQALNFASVSYSVYEKKIDEELSRVSAEIKVQSLRAVNILVAIAIVIAIAFMLK
FIAKKYIKDSERYYTATKIINFININIIFLILLFAYIENITYLVTILGFASAGLAIAMKDMFMSMLGWCVIIFGGSFRVG
DRVKVFQNDTTYIGDIIDISFLRITLYEELTLETYSKNRRSGRIIFIPNNYVFTNLLANYTHHGMKTVLDGIDISVTFDS
NLDKAQEIVENIVIRHAKGYTELARKNIARLQHEYSIKNPKVEPRFFMFFEHWGMRISAWYMTNAYAALVLRSTISKEII
EEFNKHKDIKIAYPSQNLYLGNLNQNHFEQHHENTHFHARNKD

Sequences:

>Translated_523_residues
MKKIIILTFFVVFAFGDVNRTIINNINEKINTLNTVISASIWNIRYENFIKYQDINDELIILNLNLKKTSDIHQQEELKR
KIANLEEQLSLLKEYKDLNFAQSLSAPDNIETLSKLTNPLAIIGAFSHIKKLKGEKEEYIFKFNDFKNLVDKIREKNSEL
RELVELKPSVENIEALKASDKKLEEFEQALNFASVSYSVYEKKIDEELSRVSAEIKVQSLRAVNILVAIAIVIAIAFMLK
FIAKKYIKDSERYYTATKIINFININIIFLILLFAYIENITYLVTILGFASAGLAIAMKDMFMSMLGWCVIIFGGSFRVG
DRVKVFQNDTTYIGDIIDISFLRITLYEELTLETYSKNRRSGRIIFIPNNYVFTNLLANYTHHGMKTVLDGIDISVTFDS
NLDKAQEIVENIVIRHAKGYTELARKNIARLQHEYSIKNPKVEPRFFMFFEHWGMRISAWYMTNAYAALVLRSTISKEII
EEFNKHKDIKIAYPSQNLYLGNLNQNHFEQHHENTHFHARNKD
>Mature_523_residues
MKKIIILTFFVVFAFGDVNRTIINNINEKINTLNTVISASIWNIRYENFIKYQDINDELIILNLNLKKTSDIHQQEELKR
KIANLEEQLSLLKEYKDLNFAQSLSAPDNIETLSKLTNPLAIIGAFSHIKKLKGEKEEYIFKFNDFKNLVDKIREKNSEL
RELVELKPSVENIEALKASDKKLEEFEQALNFASVSYSVYEKKIDEELSRVSAEIKVQSLRAVNILVAIAIVIAIAFMLK
FIAKKYIKDSERYYTATKIINFININIIFLILLFAYIENITYLVTILGFASAGLAIAMKDMFMSMLGWCVIIFGGSFRVG
DRVKVFQNDTTYIGDIIDISFLRITLYEELTLETYSKNRRSGRIIFIPNNYVFTNLLANYTHHGMKTVLDGIDISVTFDS
NLDKAQEIVENIVIRHAKGYTELARKNIARLQHEYSIKNPKVEPRFFMFFEHWGMRISAWYMTNAYAALVLRSTISKEII
EEFNKHKDIKIAYPSQNLYLGNLNQNHFEQHHENTHFHARNKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mscS (TC 1.A.23) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010920
- InterPro:   IPR006685
- InterPro:   IPR011014 [H]

Pfam domain/function: PF00924 MS_channel [H]

EC number: NA

Molecular weight: Translated: 60764; Mature: 60764

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIIILTFFVVFAFGDVNRTIINNINEKINTLNTVISASIWNIRYENFIKYQDINDELI
CCEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEHHHEEEEECCCCCEE
ILNLNLKKTSDIHQQEELKRKIANLEEQLSLLKEYKDLNFAQSLSAPDNIETLSKLTNPL
EEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHCCHH
AIIGAFSHIKKLKGEKEEYIFKFNDFKNLVDKIREKNSELRELVELKPSVENIEALKASD
HHHHHHHHHHHHCCCCHHHEEEEHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHCH
KKLEEFEQALNFASVSYSVYEKKIDEELSRVSAEIKVQSLRAVNILVAIAIVIAIAFMLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIAKKYIKDSERYYTATKIINFININIIFLILLFAYIENITYLVTILGFASAGLAIAMKD
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
MFMSMLGWCVIIFGGSFRVGDRVKVFQNDTTYIGDIIDISFLRITLYEELTLETYSKNRR
HHHHHHHHHHHHCCCCEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SGRIIFIPNNYVFTNLLANYTHHGMKTVLDGIDISVTFDSNLDKAQEIVENIVIRHAKGY
CCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHCCCH
TELARKNIARLQHEYSIKNPKVEPRFFMFFEHWGMRISAWYMTNAYAALVLRSTISKEII
HHHHHHHHHHHHHHHCCCCCCCCCHHEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHH
EEFNKHKDIKIAYPSQNLYLGNLNQNHFEQHHENTHFHARNKD
HHHHCCCCEEEEECCCCEEEECCCHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKKIIILTFFVVFAFGDVNRTIINNINEKINTLNTVISASIWNIRYENFIKYQDINDELI
CCEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEHHHEEEEECCCCCEE
ILNLNLKKTSDIHQQEELKRKIANLEEQLSLLKEYKDLNFAQSLSAPDNIETLSKLTNPL
EEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHCCHH
AIIGAFSHIKKLKGEKEEYIFKFNDFKNLVDKIREKNSELRELVELKPSVENIEALKASD
HHHHHHHHHHHHCCCCHHHEEEEHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHCH
KKLEEFEQALNFASVSYSVYEKKIDEELSRVSAEIKVQSLRAVNILVAIAIVIAIAFMLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIAKKYIKDSERYYTATKIINFININIIFLILLFAYIENITYLVTILGFASAGLAIAMKD
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
MFMSMLGWCVIIFGGSFRVGDRVKVFQNDTTYIGDIIDISFLRITLYEELTLETYSKNRR
HHHHHHHHHHHHCCCCEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SGRIIFIPNNYVFTNLLANYTHHGMKTVLDGIDISVTFDSNLDKAQEIVENIVIRHAKGY
CCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHCCCH
TELARKNIARLQHEYSIKNPKVEPRFFMFFEHWGMRISAWYMTNAYAALVLRSTISKEII
HHHHHHHHHHHHHHHCCCCCCCCCHHEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHH
EEFNKHKDIKIAYPSQNLYLGNLNQNHFEQHHENTHFHARNKD
HHHHCCCCEEEEECCCCEEEECCCHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]