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The map label for this gene is ybgL [C]

Identifier: 153952535

GI number: 153952535

Start: 1674776

End: 1675543

Strand: Direct

Name: ybgL [C]

Synonym: JJD26997_1899

Alternate gene names: 153952535

Gene position: 1674776-1675543 (Clockwise)

Preceding gene: 153952531

Following gene: 153951517

Centisome position: 90.77

GC content: 33.46

Gene sequence:

>768_bases
ATGTTCAAAGTGGATTTAAATAGTGATTTAGGGGAAAGTTTTGGCGCCTATAAAATGGGAATGGATGAAGAAATTTTAAA
ATTTGTAAGCTCAGTAAATGTCGCTTGTGGCTTTCATGCGGGTGATCCTTGTGTGATGGATAAAACCTTAAATTTAGCCA
AGCAAAATGGTGTTTGCATAGGAGCACACCCATCTTACCCTGATCTTTTGGGTTTTGGAAGACGCAATATGCAAATAAGC
TTTGAAGAAGCTAAAAACTATGCCTTGTATCAACTAGGAGCTTTATTTGGCTTTGCTAAGGCAAAAGACATGAAAATACA
GCATTTTAAAGCCCATGGTGCACTTTATAATATGGCAGCTATTGATGAAAATTTAGCCTTAGCACTTTGTGAGGCAGTGG
CGAGTTTTGATGAAAATATTATTTTTCTAGGGCTTAGTAATTCTGCTATGAATGAAGCAGCTAAGAAAAAGGGCTTAAAA
TATGCTAATGAAGTTTTTGCAGATCGTGCCTATAATGATGATGGCACTTTAGTTTCAAGAAAATTAGAAGGGGCATTAAT
ACACGATGAAAATTTAGCGATAAAACGCGTGATAAAAATGATAAAAGAAAGCAAAGTTACAAGCATAAATGGCAAAGAAA
TTGATTTAAAAGCGGATAGTATTTGTGTTCATGGGGATAATGTAAAAGCTTTAGAATTTGTTAAAAAAATCAAAGAAAAT
TTAGAAAAAGAGCAAATTCAAATTTGTGCTTTGGAAAATTTTATATAG

Upstream 100 bases:

>100_bases
CCCTTTCATAAAAATAATTTTTATTTTTAAAGTCTAAAATCTTTTTTCTAAAACATAAACAAATTATAATAAGATAAAAA
CATTCAATTAAGGTCAAACA

Downstream 100 bases:

>100_bases
GTTTTAGCAATGTTTAGTGTGCATTTTAGTGGAAGTAAAGCTTTGCTTTTGCGTTTTAAGCAAGAAATTTCACCTCAAAT
TAATGCTTATGTTTTAAGTA

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MFKVDLNSDLGESFGAYKMGMDEEILKFVSSVNVACGFHAGDPCVMDKTLNLAKQNGVCIGAHPSYPDLLGFGRRNMQIS
FEEAKNYALYQLGALFGFAKAKDMKIQHFKAHGALYNMAAIDENLALALCEAVASFDENIIFLGLSNSAMNEAAKKKGLK
YANEVFADRAYNDDGTLVSRKLEGALIHDENLAIKRVIKMIKESKVTSINGKEIDLKADSICVHGDNVKALEFVKKIKEN
LEKEQIQICALENFI

Sequences:

>Translated_255_residues
MFKVDLNSDLGESFGAYKMGMDEEILKFVSSVNVACGFHAGDPCVMDKTLNLAKQNGVCIGAHPSYPDLLGFGRRNMQIS
FEEAKNYALYQLGALFGFAKAKDMKIQHFKAHGALYNMAAIDENLALALCEAVASFDENIIFLGLSNSAMNEAAKKKGLK
YANEVFADRAYNDDGTLVSRKLEGALIHDENLAIKRVIKMIKESKVTSINGKEIDLKADSICVHGDNVKALEFVKKIKEN
LEKEQIQICALENFI
>Mature_255_residues
MFKVDLNSDLGESFGAYKMGMDEEILKFVSSVNVACGFHAGDPCVMDKTLNLAKQNGVCIGAHPSYPDLLGFGRRNMQIS
FEEAKNYALYQLGALFGFAKAKDMKIQHFKAHGALYNMAAIDENLALALCEAVASFDENIIFLGLSNSAMNEAAKKKGLK
YANEVFADRAYNDDGTLVSRKLEGALIHDENLAIKRVIKMIKESKVTSINGKEIDLKADSICVHGDNVKALEFVKKIKEN
LEKEQIQICALENFI

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family [H]

Homologues:

Organism=Escherichia coli, GI1786931, Length=249, Percent_Identity=42.570281124498, Blast_Score=211, Evalue=4e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR005501 [H]

Pfam domain/function: PF03746 LamB_YcsF [H]

EC number: NA

Molecular weight: Translated: 28143; Mature: 28143

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKVDLNSDLGESFGAYKMGMDEEILKFVSSVNVACGFHAGDPCVMDKTLNLAKQNGVCI
CEEEECCCCHHHCCCCCCCCCCHHHHHHHHHCCCEEECCCCCCEEHHHHHHHHHHCCEEE
GAHPSYPDLLGFGRRNMQISFEEAKNYALYQLGALFGFAKAKDMKIQHFKAHGALYNMAA
ECCCCCHHHHHCCCCCEEEEHHHHCCCHHHHHHHHHHHHHCCCCHHEEEECCCCEEEHHH
IDENLALALCEAVASFDENIIFLGLSNSAMNEAAKKKGLKYANEVFADRAYNDDGTLVSR
HCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEHH
KLEGALIHDENLAIKRVIKMIKESKVTSINGKEIDLKADSICVHGDNVKALEFVKKIKEN
HHCCEEEECCCHHHHHHHHHHHHCCCCCCCCCEEEEECCEEEEECCCHHHHHHHHHHHHH
LEKEQIQICALENFI
HHHHHEEEHHHCCCC
>Mature Secondary Structure
MFKVDLNSDLGESFGAYKMGMDEEILKFVSSVNVACGFHAGDPCVMDKTLNLAKQNGVCI
CEEEECCCCHHHCCCCCCCCCCHHHHHHHHHCCCEEECCCCCCEEHHHHHHHHHHCCEEE
GAHPSYPDLLGFGRRNMQISFEEAKNYALYQLGALFGFAKAKDMKIQHFKAHGALYNMAA
ECCCCCHHHHHCCCCCEEEEHHHHCCCHHHHHHHHHHHHHCCCCHHEEEECCCCEEEHHH
IDENLALALCEAVASFDENIIFLGLSNSAMNEAAKKKGLKYANEVFADRAYNDDGTLVSR
HCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEHH
KLEGALIHDENLAIKRVIKMIKESKVTSINGKEIDLKADSICVHGDNVKALEFVKKIKEN
HHCCEEEECCCHHHHHHHHHHHHCCCCCCCCCEEEEECCEEEEECCCHHHHHHHHHHHHH
LEKEQIQICALENFI
HHHHHEEEHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA