| Definition | Campylobacter jejuni subsp. doylei 269.97, complete genome. |
|---|---|
| Accession | NC_009707 |
| Length | 1,845,106 |
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The map label for this gene is 153952354
Identifier: 153952354
GI number: 153952354
Start: 154434
End: 156215
Strand: Direct
Name: 153952354
Synonym: JJD26997_0160
Alternate gene names: NA
Gene position: 154434-156215 (Clockwise)
Preceding gene: 153951881
Following gene: 153951773
Centisome position: 8.37
GC content: 32.94
Gene sequence:
>1782_bases ATGGAAAGAAGATTGTTTTTAAAAGGTTCAGCTTTAGGTTCTATGGTGGCTTTTTTTGCAAGTTCAAATTTAAGTGCTGC TATGCTTAAGGATAAGGATTTGCTAGGTTTTAAAGCTGTTAGTGCAAGCACACAAGATAAAGTTATAGTACCACAAGGTT ATGAAGCAAAGGTTTTAATTTCTTGGGGTGATCCACTTTTTAGTAAAGCAAAACCTTATGATGAAAATAAAATCATCGAT ATGAATGCAGTTAAAAATGCTCATTTGGTTTTTGGAGATAACGATGATGGTATGAGTTTTTTTCCACTTTCAAAAAACAG AGGAATTTTAGCCGTTAATAATGAATATATAAATCCTGAAATCATGTTTAATCATCATGGTAAAAATTTAAGCAAAGAAG ATGTTTTATATGAGCAAGCCAGTGTGGGTGTGAGTATCTTAGAAATCGAAAAAAAGGGTGATGATTGGACTGTGGTTTTA GACTCTAAGTATAACCGCAGAATCGATACAAACACTAAAATGCAAGTAAGTGGAGCAGCTAAAAAAGAAGTTTTAAAAAA TGAAAAATTTGTTCATGGAACTTTTGCAAATTGTGCAAATGGACAAACACCTTGGGGAACTTATATCACCTGTGAAGAAA ATTTTGATGATTTTTTTGGAAGTTCAGGTGAAAATCTAGAATTTAATGACTCTCTTAAACGCTATGGATTTAACAAAACT AGCCTTTATGGTTGGGAAAAATTTGATGAAAGATTTGATTTAGCTAAAAATATCGATGAAGCCAATCGTTTTGGTTGGAT AGTGGAAATCAATCCTTTTGATGCAAAAAGCACACCTGTTAAAAGAACTTCTTTAGGGCGTTTTAAACATGAAAATGCAG AAATTATCGTAGAAAAAGATGGTTCTGTTATAGTTTATATGGGTGATGATGAGATGAATGAATTTATTTATAAATTTGTT AGCAAACACAAATACAAAAAAGGTACTGATACAAGTAAAATTTTAGATGAAGGTACTTTGTATGTAGGACAGTTTAATGG CAAGGTGGGAGATTTTAAAGGACAGGGAAAATGGATAGCCTTAGAATATGGCAAAAACGGCTTAGATGAAAAAAATGGTT TTAAGTCTCAAGCTCAAATACTCATCAATACTCGTCTTGCTGCAAGCATTGTAGGTGCAACTCCTATGGATAGATGTGAA TGGATAGAAAGCCATAAACAAAGTGGTTCTAAAGAAGTATTTGCAACACTGACAAACAATAAAAATCGCCAAAAACCTAA TGCAGCAAATCCAAGAACTAAAAATGTTTATGGACAAATTTTAAAATGGATGCCAAAAAATTCTCATAAAGACGATGATT TTACTTGGGAAATTTTTGCTCTTGCTGGAAATCCTGATAACCAACAAGGCTTATATAAAGGCTCAAATAATATTACAAGT GAAAATAAATTCAATTCTCCTGATGGACTTAAATTTGATAGAGATGGAAGACTTTGGATACAAACAGATGGATCTTATTC TAATAAAGATGAATACGAAGGCATGGGAAATAATTGCATGCTAGCAGCAAATCCAAAAACAGGGGAAATCAGACGCTTTT TAACAGGGCCTATTGCTTGTGAATTAACAGGGATTGCTTTTAGTGAGGATTATACTACAATGTTTGTAGGCATACAACAT CCAGGAGAAGGTTTGAAAGGTAGTACTTTTCCTTATGGAAAAACACCAAGATCGAGTGTAATGATGATAAGAAAACTTGA TGGTGGAGTGATAGGAAGCTAA
Upstream 100 bases:
>100_bases AAATTTTTCCTTCAATTTAATTTTTCATCAAAGTTTCTAAAAAGTTTCCAAATATTTTTATACTTCCATTGTTTTAAATT TTAATATGGAGTAAAAACAA
Downstream 100 bases:
>100_bases ATAAAAAGAAAGTTGCTTTTTAGCAACTTTAAAAATCTTAATGCAAGCTTTCTATATAAGCCATAGCACTTAATGCAGCT ACAGCTCCATCACCTGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphatase; Tat Pathway Signal Sequence Domain-Containing Protein; Tat Pathway Signal Sequence Domain Protein; Twin-Arginine Translocation Pathway Signal Protein; UxpB Protein; DTDP-Glucose 4 6-Dehydratase; Twin Arginine Translocation Pathway Signal Protein; DTDP-D-Glucose 4 6-Dehydratase; Glutamate-Cysteine Ligase/Putative Amino Acid Ligase; Cell Surface Protein; Alkaline Phosphatase Family Protein; Exported Protein
Number of amino acids: Translated: 593; Mature: 593
Protein sequence:
>593_residues MERRLFLKGSALGSMVAFFASSNLSAAMLKDKDLLGFKAVSASTQDKVIVPQGYEAKVLISWGDPLFSKAKPYDENKIID MNAVKNAHLVFGDNDDGMSFFPLSKNRGILAVNNEYINPEIMFNHHGKNLSKEDVLYEQASVGVSILEIEKKGDDWTVVL DSKYNRRIDTNTKMQVSGAAKKEVLKNEKFVHGTFANCANGQTPWGTYITCEENFDDFFGSSGENLEFNDSLKRYGFNKT SLYGWEKFDERFDLAKNIDEANRFGWIVEINPFDAKSTPVKRTSLGRFKHENAEIIVEKDGSVIVYMGDDEMNEFIYKFV SKHKYKKGTDTSKILDEGTLYVGQFNGKVGDFKGQGKWIALEYGKNGLDEKNGFKSQAQILINTRLAASIVGATPMDRCE WIESHKQSGSKEVFATLTNNKNRQKPNAANPRTKNVYGQILKWMPKNSHKDDDFTWEIFALAGNPDNQQGLYKGSNNITS ENKFNSPDGLKFDRDGRLWIQTDGSYSNKDEYEGMGNNCMLAANPKTGEIRRFLTGPIACELTGIAFSEDYTTMFVGIQH PGEGLKGSTFPYGKTPRSSVMMIRKLDGGVIGS
Sequences:
>Translated_593_residues MERRLFLKGSALGSMVAFFASSNLSAAMLKDKDLLGFKAVSASTQDKVIVPQGYEAKVLISWGDPLFSKAKPYDENKIID MNAVKNAHLVFGDNDDGMSFFPLSKNRGILAVNNEYINPEIMFNHHGKNLSKEDVLYEQASVGVSILEIEKKGDDWTVVL DSKYNRRIDTNTKMQVSGAAKKEVLKNEKFVHGTFANCANGQTPWGTYITCEENFDDFFGSSGENLEFNDSLKRYGFNKT SLYGWEKFDERFDLAKNIDEANRFGWIVEINPFDAKSTPVKRTSLGRFKHENAEIIVEKDGSVIVYMGDDEMNEFIYKFV SKHKYKKGTDTSKILDEGTLYVGQFNGKVGDFKGQGKWIALEYGKNGLDEKNGFKSQAQILINTRLAASIVGATPMDRCE WIESHKQSGSKEVFATLTNNKNRQKPNAANPRTKNVYGQILKWMPKNSHKDDDFTWEIFALAGNPDNQQGLYKGSNNITS ENKFNSPDGLKFDRDGRLWIQTDGSYSNKDEYEGMGNNCMLAANPKTGEIRRFLTGPIACELTGIAFSEDYTTMFVGIQH PGEGLKGSTFPYGKTPRSSVMMIRKLDGGVIGS >Mature_593_residues MERRLFLKGSALGSMVAFFASSNLSAAMLKDKDLLGFKAVSASTQDKVIVPQGYEAKVLISWGDPLFSKAKPYDENKIID MNAVKNAHLVFGDNDDGMSFFPLSKNRGILAVNNEYINPEIMFNHHGKNLSKEDVLYEQASVGVSILEIEKKGDDWTVVL DSKYNRRIDTNTKMQVSGAAKKEVLKNEKFVHGTFANCANGQTPWGTYITCEENFDDFFGSSGENLEFNDSLKRYGFNKT SLYGWEKFDERFDLAKNIDEANRFGWIVEINPFDAKSTPVKRTSLGRFKHENAEIIVEKDGSVIVYMGDDEMNEFIYKFV SKHKYKKGTDTSKILDEGTLYVGQFNGKVGDFKGQGKWIALEYGKNGLDEKNGFKSQAQILINTRLAASIVGATPMDRCE WIESHKQSGSKEVFATLTNNKNRQKPNAANPRTKNVYGQILKWMPKNSHKDDDFTWEIFALAGNPDNQQGLYKGSNNITS ENKFNSPDGLKFDRDGRLWIQTDGSYSNKDEYEGMGNNCMLAANPKTGEIRRFLTGPIACELTGIAFSEDYTTMFVGIQH PGEGLKGSTFPYGKTPRSSVMMIRKLDGGVIGS
Specific function: Unknown
COG id: COG3211
COG function: function code R; Predicted phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66427; Mature: 66427
Theoretical pI: Translated: 7.26; Mature: 7.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERRLFLKGSALGSMVAFFASSNLSAAMLKDKDLLGFKAVSASTQDKVIVPQGYEAKVLI CCCEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCCCCEEECCCCCEEEEE SWGDPLFSKAKPYDENKIIDMNAVKNAHLVFGDNDDGMSFFPLSKNRGILAVNNEYINPE EECCCHHHCCCCCCCCEEEEECCCCCEEEEECCCCCCCEEEEECCCCCEEEECCCCCCCE IMFNHHGKNLSKEDVLYEQASVGVSILEIEKKGDDWTVVLDSKYNRRIDTNTKMQVSGAA EEEECCCCCCCHHHHHHHHHHCCEEEEEEEECCCCEEEEECCCCCCCCCCCCEEEECCCH KKEVLKNEKFVHGTFANCANGQTPWGTYITCEENFDDFFGSSGENLEFNDSLKRYGFNKT HHHHHCCCCEEEECHHHCCCCCCCCCCEEEECCCCHHHHCCCCCCEEECCHHHHCCCCCC SLYGWEKFDERFDLAKNIDEANRFGWIVEINPFDAKSTPVKRTSLGRFKHENAEIIVEKD EECCHHHHHHHHHHHHCCCCHHHEEEEEEECCCCCCCCCCCHHHCCCEECCCCEEEEECC GSVIVYMGDDEMNEFIYKFVSKHKYKKGTDTSKILDEGTLYVGQFNGKVGDFKGQGKWIA CCEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCEEEEEECCCCCCCCCCCCEEE LEYGKNGLDEKNGFKSQAQILINTRLAASIVGATPMDRCEWIESHKQSGSKEVFATLTNN EECCCCCCCCCCCCCCEEEEEEEEHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEEECC KNRQKPNAANPRTKNVYGQILKWMPKNSHKDDDFTWEIFALAGNPDNQQGLYKGSNNITS CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCEEECCCCCCC ENKFNSPDGLKFDRDGRLWIQTDGSYSNKDEYEGMGNNCMLAANPKTGEIRRFLTGPIAC CCCCCCCCCCEECCCCEEEEEECCCCCCCHHHCCCCCCEEEEECCCCCHHHHHHCCCEEE ELTGIAFSEDYTTMFVGIQHPGEGLKGSTFPYGKTPRSSVMMIRKLDGGVIGS EEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHEEEEEECCCCCCCC >Mature Secondary Structure MERRLFLKGSALGSMVAFFASSNLSAAMLKDKDLLGFKAVSASTQDKVIVPQGYEAKVLI CCCEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCCCCEEECCCCCEEEEE SWGDPLFSKAKPYDENKIIDMNAVKNAHLVFGDNDDGMSFFPLSKNRGILAVNNEYINPE EECCCHHHCCCCCCCCEEEEECCCCCEEEEECCCCCCCEEEEECCCCCEEEECCCCCCCE IMFNHHGKNLSKEDVLYEQASVGVSILEIEKKGDDWTVVLDSKYNRRIDTNTKMQVSGAA EEEECCCCCCCHHHHHHHHHHCCEEEEEEEECCCCEEEEECCCCCCCCCCCCEEEECCCH KKEVLKNEKFVHGTFANCANGQTPWGTYITCEENFDDFFGSSGENLEFNDSLKRYGFNKT HHHHHCCCCEEEECHHHCCCCCCCCCCEEEECCCCHHHHCCCCCCEEECCHHHHCCCCCC SLYGWEKFDERFDLAKNIDEANRFGWIVEINPFDAKSTPVKRTSLGRFKHENAEIIVEKD EECCHHHHHHHHHHHHCCCCHHHEEEEEEECCCCCCCCCCCHHHCCCEECCCCEEEEECC GSVIVYMGDDEMNEFIYKFVSKHKYKKGTDTSKILDEGTLYVGQFNGKVGDFKGQGKWIA CCEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCEEEEEECCCCCCCCCCCCEEE LEYGKNGLDEKNGFKSQAQILINTRLAASIVGATPMDRCEWIESHKQSGSKEVFATLTNN EECCCCCCCCCCCCCCEEEEEEEEHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEEECC KNRQKPNAANPRTKNVYGQILKWMPKNSHKDDDFTWEIFALAGNPDNQQGLYKGSNNITS CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCEEECCCCCCC ENKFNSPDGLKFDRDGRLWIQTDGSYSNKDEYEGMGNNCMLAANPKTGEIRRFLTGPIAC CCCCCCCCCCEECCCCEEEEEECCCCCCCHHHCCCCCCEEEEECCCCCHHHHHHCCCEEE ELTGIAFSEDYTTMFVGIQHPGEGLKGSTFPYGKTPRSSVMMIRKLDGGVIGS EEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA