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The map label for this gene is nrfH [H]

Identifier: 153952264

GI number: 153952264

Start: 300035

End: 300550

Strand: Direct

Name: nrfH [H]

Synonym: JJD26997_0340

Alternate gene names: 153952264

Gene position: 300035-300550 (Clockwise)

Preceding gene: 153952597

Following gene: 153951301

Centisome position: 16.26

GC content: 35.66

Gene sequence:

>516_bases
ATGATAATTTTAAGGAGGAAAATTTTGAAGAAAACTTCGAATCTTTTTATTATTTTTCTTGTTTTGCTTTTTGTTTTCTT
TGCGGTTGGGTTTTATACTTTTTATAACGCTAAGGGCACATCTTATTTAAGCAATGCAAGTGAATCGTGCAATAACTGCC
ATATTATGAATGAAGTTTATAACGAATACATGGCAGGGTCGCACTCTCAAAAAGTCAAAGGCGAGCCTAGAGCAACTTGC
GTGGATTGCCATTTGCCACATAATTTTGTAGCTAAGTGGATAGCTAAGGCTCAAAGTGGTTTAGGGCATGCTTATGCTTT
TACTTTTAAACTTGATGAGTTGCCTACAAATTTGAGTGCGACTGAAAAAAGCAGAAAAATGGTGCAAGAAAACTGCATAC
GCTGTCATGCAGATTTTGCTCAAACAGCTATCAATGCTACAACAAATCCACATGCAGACAAGTCATTAAATTGTGCTTCT
TGTCATAAAGATGTTGGACATAAACACGGAATTTAA

Upstream 100 bases:

>100_bases
ATATATCTTTAAAATTATATTAAATTCATCTATGTTAGAATCACAAAATTTATTTCTGGGAAATTCTGTGACATTGTTGT
TTCATTGAAGGTTTTAAGAA

Downstream 100 bases:

>100_bases
CAAGGAGAAGATGAATGAAAAAAAATATTTTACGCTTGGGTATTGTTGTTTTGGTTTTACTTATAGCGGGAGTTTTATGG
CTAAATAATGATATCAATCA

Product: cytochrome c-type protein nrfH

Products: reduced acceptor; NO3- [C]

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MIILRRKILKKTSNLFIIFLVLLFVFFAVGFYTFYNAKGTSYLSNASESCNNCHIMNEVYNEYMAGSHSQKVKGEPRATC
VDCHLPHNFVAKWIAKAQSGLGHAYAFTFKLDELPTNLSATEKSRKMVQENCIRCHADFAQTAINATTNPHADKSLNCAS
CHKDVGHKHGI

Sequences:

>Translated_171_residues
MIILRRKILKKTSNLFIIFLVLLFVFFAVGFYTFYNAKGTSYLSNASESCNNCHIMNEVYNEYMAGSHSQKVKGEPRATC
VDCHLPHNFVAKWIAKAQSGLGHAYAFTFKLDELPTNLSATEKSRKMVQENCIRCHADFAQTAINATTNPHADKSLNCAS
CHKDVGHKHGI
>Mature_171_residues
MIILRRKILKKTSNLFIIFLVLLFVFFAVGFYTFYNAKGTSYLSNASESCNNCHIMNEVYNEYMAGSHSQKVKGEPRATC
VDCHLPHNFVAKWIAKAQSGLGHAYAFTFKLDELPTNLSATEKSRKMVQENCIRCHADFAQTAINATTNPHADKSLNCAS
CHKDVGHKHGI

Specific function: Subunit of the nitrite reductase complex that mediates electron transfer from quinol to the catalytic subunit [H]

COG id: COG3005

COG function: function code C; Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788530, Length=178, Percent_Identity=31.4606741573034, Blast_Score=67, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017571
- InterPro:   IPR011031
- InterPro:   IPR005126 [H]

Pfam domain/function: PF03264 Cytochrom_NNT [H]

EC number: NA

Molecular weight: Translated: 19178; Mature: 19178

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIILRRKILKKTSNLFIIFLVLLFVFFAVGFYTFYNAKGTSYLSNASESCNNCHIMNEVY
CEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHH
NEYMAGSHSQKVKGEPRATCVDCHLPHNFVAKWIAKAQSGLGHAYAFTFKLDELPTNLSA
HHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCH
TEKSRKMVQENCIRCHADFAQTAINATTNPHADKSLNCASCHKDVGHKHGI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MIILRRKILKKTSNLFIIFLVLLFVFFAVGFYTFYNAKGTSYLSNASESCNNCHIMNEVY
CEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHH
NEYMAGSHSQKVKGEPRATCVDCHLPHNFVAKWIAKAQSGLGHAYAFTFKLDELPTNLSA
HHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCH
TEKSRKMVQENCIRCHADFAQTAINATTNPHADKSLNCASCHKDVGHKHGI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acceptor; nitrite [C]

Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10672190; 14500908 [H]