Click here to switch to the map view.

The map label for this gene is mutS [H]

Identifier: 153952164

GI number: 153952164

Start: 618655

End: 620862

Strand: Direct

Name: mutS [H]

Synonym: JJD26997_0683

Alternate gene names: 153952164

Gene position: 618655-620862 (Clockwise)

Preceding gene: 153951201

Following gene: 153951135

Centisome position: 33.53

GC content: 32.56

Gene sequence:

>2208_bases
ATGAATGACACAAAAGAAGAATTGATCTCAAAGCTTGATTTAAATAGCTATTTAGAAGAATTTAAAGCCCTTTTTGCAAG
AGGTAAGGAAATTTTTTTACAAGGAGATTGCAACCTTCATTTTAAACGCATACATGAGCTTTGCGAGGTGGAATTTCCTA
CTATGCCAGAGCTTAGTAATCTTGATAAAGCCTTAGTGCATTTAAGCAAGCAAGGAATTTTACATTTAGATGAAATTTTT
GAATTTGTAAAAATTCTTCGCTATTTTGAAAAGCTGAAAAAAATAAAATTAGGAACAAATTTAGACTCTTGGTTGCAAAA
GATAGAATTTGTTAGCGGAGCTTTGGAACTTTGTTTGAATTTTGATGAAAAAGGGGAATTAAAAGAAAGCTTAGATGAAA
AACTTGTAAATCTTAATACCGCTTTAAGATTAAAAAACGAAAGTATAATAGCTGAGTTTAAGAAATTTTGTTATACAAAA
GCTTTAATGCCTTATCTTATCGACACACAAATCCATCTTATAAACAATCTTGAAGCCTTGCTTGTAAGAGGTGGGTTTAA
TCACGCTATTAAAGCAAAAATCATAGGTAGAAGTAGTGGCGGTGGCTTTTATATCGTGCCTTTAAGTGTTGAGAATTTGC
AAAATGATATAGAAAAAATCAAAAATCAAAAAGAAGAAATTTATTATGAATACGCTAAAAATTTCTCAGCTTTTTTAGCA
AAAAACCTACCTTTTTTAAAATTTATCAATACAGCGTTTGATCTTTTTGATCATTATAGTGCTAGGGTTTTACTTGCTAA
AAAAAGGGATTTTGAATTTGTTTTATGCGATCAAAGTGCGGATTTGGTTCTTAAAAATTTCGCCCATCCTGCTTTAAAAA
ATCCAAAAAGTGTGAGTTTGGAATTTAAAAAACAAGTTTTAATCATCACAGGGGTAAATGCAGGTGGAAAATCCATGCTT
TTAAAATCCATGCTAAGCGCAGCATTTTTAGCTAAACATCTTTTGCCTATGCATATAAAAGCAAGTGAAAGTAAAATCGG
TACTTTTAAAGAATTTGATGCCATCATAGAAGATCCGCAAAATGTTAAAAATGACATTTCAACTTTTGCAGGAAGAATGT
TGCATTTTTCTAGGCTTTTTTCTAAGAAAAATTTGCTTTTAGGCATCGATGAAATAGAGCTTGGGACAGATTTTGAAGAA
GCGGCTTGTTTGTATAGTGTGTTAATTTCAAAACTTATAGCTAATAATCTTAAAATCATCATTACCACCCACCACAAACG
CCTTGCCATGCTTTTAGCAAAAAATGAGCAAGTTGAACTCATTGCTGCTTTATACAATGAAGAGCTTTCACGCCCAAAAT
ACGAGTTTTTGAAAGGTACTATAGGAAAATCTTATGCCTTTGAAACCGCTTTGCGTTATCAGATTCCGCCGAATTTAGTT
AGCGAGGCTAAAAAGCTTTATGGCGAGGATAAAGAAAATTTAGAAGAGCTGATAGGTAAAAATATCAATCTTGAATTAGA
ACTAAAAGCTAAGCTTGAAAATGTCGAGAAAAAAGAGCAAAAAGTCGATGAAATTTTACTTTCTTTAAAAGAGCAAAAAG
AAAAAAATGAACAAGAATTTCGCATGAATTTAAGAAATTTAGAATTTAAATTTCACAAAGCCATAGAAGAAGCTAAAAAA
ACCATACAGCTTAAAGACATAAAAGACAAGCAAAGAAGTCTTAATAAAGCCAATGAGCTTAAAAAAGAAATCATCTTGCC
AAGTATGGAGCAAAATGAAGAATTGCGTGTGGGGGATTTTGTAAAATATGAAAAGATTAAGGGTAAAATCATAAGCATTT
CTAAAAACGATGCTATGGTTGAAAGCGATGGGATCAAACTTCGTGTGCCTTTAAAACTGCTTAAAAAAAGTGGTGCAATG
CCAAAAAAAGTAGCAAAAACAAGTATAAGCGTAAGTAAACCAAGCAATCTAAGCGTAACTTTGGATTTGCACGGGCTTAG
GAGTGATGAGGCTATTTCAAGGCTTGATAAATTTATTTCAGATGCTTTGCTTGCAGGCTTTGATGAAGTTTTGATCTATC
ACGGTATAGGAACAGGAAAGCTCGCCTTTGCGGTAAGAGAGTTTTTAAAAACTCACAAAAGTGTCAAAGGCTTTAATGAC
GCACCGATCAATCAAGGTGGCTTTGGTGCTAAGGTGGTGAGACTATAA

Upstream 100 bases:

>100_bases
TATTTTAACTACGAATTTGGTACAGGAAGTTTTATTTCCAAGGATAATAATCAAAGTTTTAATTCTTTAATTATAGATAT
TAAAGATTGTAGGTTAAATG

Downstream 100 bases:

>100_bases
TTTGTTAATCCTGTCTTGATCGCTATCGCCTTTAAAGAACGCATAATTTTTATGATTGCATTTATATGCAAAATAAATTT
CTTGGTTTTCTTTGATAAAG

Product: recombination and DNA strand exchange inhibitor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 735; Mature: 735

Protein sequence:

>735_residues
MNDTKEELISKLDLNSYLEEFKALFARGKEIFLQGDCNLHFKRIHELCEVEFPTMPELSNLDKALVHLSKQGILHLDEIF
EFVKILRYFEKLKKIKLGTNLDSWLQKIEFVSGALELCLNFDEKGELKESLDEKLVNLNTALRLKNESIIAEFKKFCYTK
ALMPYLIDTQIHLINNLEALLVRGGFNHAIKAKIIGRSSGGGFYIVPLSVENLQNDIEKIKNQKEEIYYEYAKNFSAFLA
KNLPFLKFINTAFDLFDHYSARVLLAKKRDFEFVLCDQSADLVLKNFAHPALKNPKSVSLEFKKQVLIITGVNAGGKSML
LKSMLSAAFLAKHLLPMHIKASESKIGTFKEFDAIIEDPQNVKNDISTFAGRMLHFSRLFSKKNLLLGIDEIELGTDFEE
AACLYSVLISKLIANNLKIIITTHHKRLAMLLAKNEQVELIAALYNEELSRPKYEFLKGTIGKSYAFETALRYQIPPNLV
SEAKKLYGEDKENLEELIGKNINLELELKAKLENVEKKEQKVDEILLSLKEQKEKNEQEFRMNLRNLEFKFHKAIEEAKK
TIQLKDIKDKQRSLNKANELKKEIILPSMEQNEELRVGDFVKYEKIKGKIISISKNDAMVESDGIKLRVPLKLLKKSGAM
PKKVAKTSISVSKPSNLSVTLDLHGLRSDEAISRLDKFISDALLAGFDEVLIYHGIGTGKLAFAVREFLKTHKSVKGFND
APINQGGFGAKVVRL

Sequences:

>Translated_735_residues
MNDTKEELISKLDLNSYLEEFKALFARGKEIFLQGDCNLHFKRIHELCEVEFPTMPELSNLDKALVHLSKQGILHLDEIF
EFVKILRYFEKLKKIKLGTNLDSWLQKIEFVSGALELCLNFDEKGELKESLDEKLVNLNTALRLKNESIIAEFKKFCYTK
ALMPYLIDTQIHLINNLEALLVRGGFNHAIKAKIIGRSSGGGFYIVPLSVENLQNDIEKIKNQKEEIYYEYAKNFSAFLA
KNLPFLKFINTAFDLFDHYSARVLLAKKRDFEFVLCDQSADLVLKNFAHPALKNPKSVSLEFKKQVLIITGVNAGGKSML
LKSMLSAAFLAKHLLPMHIKASESKIGTFKEFDAIIEDPQNVKNDISTFAGRMLHFSRLFSKKNLLLGIDEIELGTDFEE
AACLYSVLISKLIANNLKIIITTHHKRLAMLLAKNEQVELIAALYNEELSRPKYEFLKGTIGKSYAFETALRYQIPPNLV
SEAKKLYGEDKENLEELIGKNINLELELKAKLENVEKKEQKVDEILLSLKEQKEKNEQEFRMNLRNLEFKFHKAIEEAKK
TIQLKDIKDKQRSLNKANELKKEIILPSMEQNEELRVGDFVKYEKIKGKIISISKNDAMVESDGIKLRVPLKLLKKSGAM
PKKVAKTSISVSKPSNLSVTLDLHGLRSDEAISRLDKFISDALLAGFDEVLIYHGIGTGKLAFAVREFLKTHKSVKGFND
APINQGGFGAKVVRL
>Mature_735_residues
MNDTKEELISKLDLNSYLEEFKALFARGKEIFLQGDCNLHFKRIHELCEVEFPTMPELSNLDKALVHLSKQGILHLDEIF
EFVKILRYFEKLKKIKLGTNLDSWLQKIEFVSGALELCLNFDEKGELKESLDEKLVNLNTALRLKNESIIAEFKKFCYTK
ALMPYLIDTQIHLINNLEALLVRGGFNHAIKAKIIGRSSGGGFYIVPLSVENLQNDIEKIKNQKEEIYYEYAKNFSAFLA
KNLPFLKFINTAFDLFDHYSARVLLAKKRDFEFVLCDQSADLVLKNFAHPALKNPKSVSLEFKKQVLIITGVNAGGKSML
LKSMLSAAFLAKHLLPMHIKASESKIGTFKEFDAIIEDPQNVKNDISTFAGRMLHFSRLFSKKNLLLGIDEIELGTDFEE
AACLYSVLISKLIANNLKIIITTHHKRLAMLLAKNEQVELIAALYNEELSRPKYEFLKGTIGKSYAFETALRYQIPPNLV
SEAKKLYGEDKENLEELIGKNINLELELKAKLENVEKKEQKVDEILLSLKEQKEKNEQEFRMNLRNLEFKFHKAIEEAKK
TIQLKDIKDKQRSLNKANELKKEIILPSMEQNEELRVGDFVKYEKIKGKIISISKNDAMVESDGIKLRVPLKLLKKSGAM
PKKVAKTSISVSKPSNLSVTLDLHGLRSDEAISRLDKFISDALLAGFDEVLIYHGIGTGKLAFAVREFLKTHKSVKGFND
APINQGGFGAKVVRL

Specific function: Unknown

COG id: COG1193

COG function: function code L; Mismatch repair ATPase (MutS family)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Smr domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005747
- InterPro:   IPR000432
- InterPro:   IPR007696
- InterPro:   IPR002625 [H]

Pfam domain/function: PF00488 MutS_V; PF01713 Smr [H]

EC number: NA

Molecular weight: Translated: 83684; Mature: 83684

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: PS50828 SMR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDTKEELISKLDLNSYLEEFKALFARGKEIFLQGDCNLHFKRIHELCEVEFPTMPELSN
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCHHH
LDKALVHLSKQGILHLDEIFEFVKILRYFEKLKKIKLGTNLDSWLQKIEFVSGALELCLN
HHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC
FDEKGELKESLDEKLVNLNTALRLKNESIIAEFKKFCYTKALMPYLIDTQIHLINNLEAL
CCCCCHHHHHHHHHHHCCHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LVRGGFNHAIKAKIIGRSSGGGFYIVPLSVENLQNDIEKIKNQKEEIYYEYAKNFSAFLA
EEECCCCCEEEEEEEEECCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KNLPFLKFINTAFDLFDHYSARVLLAKKRDFEFVLCDQSADLVLKNFAHPALKNPKSVSL
CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCHHHHHHHCCHHHCCCCCCEE
EFKKQVLIITGVNAGGKSMLLKSMLSAAFLAKHLLPMHIKASESKIGTFKEFDAIIEDPQ
EEECEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHCCHH
NVKNDISTFAGRMLHFSRLFSKKNLLLGIDEIELGTDFEEAACLYSVLISKLIANNLKII
HHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCEEE
ITTHHKRLAMLLAKNEQVELIAALYNEELSRPKYEFLKGTIGKSYAFETALRYQIPPNLV
EEECCHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHEECCCHHHH
SEAKKLYGEDKENLEELIGKNINLELELKAKLENVEKKEQKVDEILLSLKEQKEKNEQEF
HHHHHHHCCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
RMNLRNLEFKFHKAIEEAKKTIQLKDIKDKQRSLNKANELKKEIILPSMEQNEELRVGDF
HHHHHHHHHHHHHHHHHHHHHEEHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
VKYEKIKGKIISISKNDAMVESDGIKLRVPLKLLKKSGAMPKKVAKTSISVSKPSNLSVT
HHHHHHCCEEEEEECCCCEEECCCCEEEECHHHHHCCCCCCHHHHHHCCCCCCCCCCEEE
LDLHGLRSDEAISRLDKFISDALLAGFDEVLIYHGIGTGKLAFAVREFLKTHKSVKGFND
EEECCCCCHHHHHHHHHHHHHHHHHCHHHHHEEECCCCHHHHHHHHHHHHHHHHCCCCCC
APINQGGFGAKVVRL
CCCCCCCCCCEEEEC
>Mature Secondary Structure
MNDTKEELISKLDLNSYLEEFKALFARGKEIFLQGDCNLHFKRIHELCEVEFPTMPELSN
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCHHH
LDKALVHLSKQGILHLDEIFEFVKILRYFEKLKKIKLGTNLDSWLQKIEFVSGALELCLN
HHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC
FDEKGELKESLDEKLVNLNTALRLKNESIIAEFKKFCYTKALMPYLIDTQIHLINNLEAL
CCCCCHHHHHHHHHHHCCHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LVRGGFNHAIKAKIIGRSSGGGFYIVPLSVENLQNDIEKIKNQKEEIYYEYAKNFSAFLA
EEECCCCCEEEEEEEEECCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KNLPFLKFINTAFDLFDHYSARVLLAKKRDFEFVLCDQSADLVLKNFAHPALKNPKSVSL
CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCHHHHHHHCCHHHCCCCCCEE
EFKKQVLIITGVNAGGKSMLLKSMLSAAFLAKHLLPMHIKASESKIGTFKEFDAIIEDPQ
EEECEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHCCHH
NVKNDISTFAGRMLHFSRLFSKKNLLLGIDEIELGTDFEEAACLYSVLISKLIANNLKII
HHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCEEE
ITTHHKRLAMLLAKNEQVELIAALYNEELSRPKYEFLKGTIGKSYAFETALRYQIPPNLV
EEECCHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHEECCCHHHH
SEAKKLYGEDKENLEELIGKNINLELELKAKLENVEKKEQKVDEILLSLKEQKEKNEQEF
HHHHHHHCCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
RMNLRNLEFKFHKAIEEAKKTIQLKDIKDKQRSLNKANELKKEIILPSMEQNEELRVGDF
HHHHHHHHHHHHHHHHHHHHHEEHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
VKYEKIKGKIISISKNDAMVESDGIKLRVPLKLLKKSGAMPKKVAKTSISVSKPSNLSVT
HHHHHHCCEEEEEECCCCEEECCCCEEEECHHHHHCCCCCCHHHHHHCCCCCCCCCCEEE
LDLHGLRSDEAISRLDKFISDALLAGFDEVLIYHGIGTGKLAFAVREFLKTHKSVKGFND
EEECCCCCHHHHHHHHHHHHHHHHHCHHHHHEEECCCCHHHHHHHHHHHHHHHHCCCCCC
APINQGGFGAKVVRL
CCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]