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The map label for this gene is parB [H]

Identifier: 153952129

GI number: 153952129

Start: 110975

End: 111811

Strand: Direct

Name: parB [H]

Synonym: JJD26997_0108

Alternate gene names: 153952129

Gene position: 110975-111811 (Clockwise)

Preceding gene: 153952401

Following gene: 153951555

Centisome position: 6.01

GC content: 26.52

Gene sequence:

>837_bases
ATGGGGTTAAATAAAGATAGGGGTTTAAGCAGTTTAATCAGTGATATGGATACTGTTTACAGTAAAGAATTGGGTTTTGA
TAAAAATCAAAGCACTATGATAGAAATTGATCAAATTTCACCTAATCCATTTCAGCCAAGAAAGAATTTTGATCAAGAAG
CTTTAGATGAGCTTGCTAATTCTATCAAAGAATTTGGACTTATTCAGCCTATTATTGTATTTAAAAAAAATAATAAATTT
ATTTTAATTGCTGGAGAACGTCGCTTAAGAGCAGTGAAAGCATTAGGAAAAAAAGAAATTCTAGCTTTCATTGCTGATAT
TGATGAGAATAAGCTTAGAGAATTGGCTCTTATTGAAAATATACAAAGAGAGAATTTAAACCCTATTGAGCTTGCTAATT
CTTATAAGGATTTGATGCAAGTTCATAAAATTACTCAAGAGAATTTAGCAGAACTTATTCATAAGTCTCGTACTCAAATA
ACAAATACTTTAAGACTTTTGAATTTAGATATTAGAACTCAAGAGTTGATTGCTTCTGGAAAAATTTCTCAGGGTCATGC
TAAAGTTTTGGTTGGTTTAGATCAAAAAGATGAAAAAATGTTGGTTGATAGCATAATAGGTCAAAAACTTAATGTTAGAG
ATACTGAAAAAATAGTTAAAAAAATAAAAAATAATGAAAGCTTACCTAATCAAGAATTTGAAGATGAAATAAAAAAATTA
AAACAAATACTAAATCGCTTTGGATTTGACTGTAAAAATAGAAATAATGATTTTGTAATTCATTTAGAAAATATTGATAA
AATTAAAAAATTAATCAAAATGCTTGAAAAGTTTTAA

Upstream 100 bases:

>100_bases
AAAGTCCAAGTTTTGGAAAGCCTATAATTCTTTATGATATTAAATCGCCAGGTTCTGTTGCTTATCAAAATTTGGCGTAT
TCTATATTGGGATGATTATA

Downstream 100 bases:

>100_bases
CCAAAATCTTAGCTTTTTTATGGTAAAATAGCCCTTCGGAAATTCTAACCAAAAAGGAGAATTATGTTTGAAGATATGCA
TCCTTCCATAATGCTTGCTA

Product: ParB family chromosome partitioning protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 277

Protein sequence:

>278_residues
MGLNKDRGLSSLISDMDTVYSKELGFDKNQSTMIEIDQISPNPFQPRKNFDQEALDELANSIKEFGLIQPIIVFKKNNKF
ILIAGERRLRAVKALGKKEILAFIADIDENKLRELALIENIQRENLNPIELANSYKDLMQVHKITQENLAELIHKSRTQI
TNTLRLLNLDIRTQELIASGKISQGHAKVLVGLDQKDEKMLVDSIIGQKLNVRDTEKIVKKIKNNESLPNQEFEDEIKKL
KQILNRFGFDCKNRNNDFVIHLENIDKIKKLIKMLEKF

Sequences:

>Translated_278_residues
MGLNKDRGLSSLISDMDTVYSKELGFDKNQSTMIEIDQISPNPFQPRKNFDQEALDELANSIKEFGLIQPIIVFKKNNKF
ILIAGERRLRAVKALGKKEILAFIADIDENKLRELALIENIQRENLNPIELANSYKDLMQVHKITQENLAELIHKSRTQI
TNTLRLLNLDIRTQELIASGKISQGHAKVLVGLDQKDEKMLVDSIIGQKLNVRDTEKIVKKIKNNESLPNQEFEDEIKKL
KQILNRFGFDCKNRNNDFVIHLENIDKIKKLIKMLEKF
>Mature_277_residues
GLNKDRGLSSLISDMDTVYSKELGFDKNQSTMIEIDQISPNPFQPRKNFDQEALDELANSIKEFGLIQPIIVFKKNNKFI
LIAGERRLRAVKALGKKEILAFIADIDENKLRELALIENIQRENLNPIELANSYKDLMQVHKITQENLAELIHKSRTQIT
NTLRLLNLDIRTQELIASGKISQGHAKVLVGLDQKDEKMLVDSIIGQKLNVRDTEKIVKKIKNNESLPNQEFEDEIKKLK
QILNRFGFDCKNRNNDFVIHLENIDKIKKLIKMLEKF

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication [H]

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115 [H]

Pfam domain/function: PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 32091; Mature: 31960

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLNKDRGLSSLISDMDTVYSKELGFDKNQSTMIEIDQISPNPFQPRKNFDQEALDELAN
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHH
SIKEFGLIQPIIVFKKNNKFILIAGERRLRAVKALGKKEILAFIADIDENKLRELALIEN
HHHHCCCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
IQRENLNPIELANSYKDLMQVHKITQENLAELIHKSRTQITNTLRLLNLDIRTQELIASG
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
KISQGHAKVLVGLDQKDEKMLVDSIIGQKLNVRDTEKIVKKIKNNESLPNQEFEDEIKKL
CCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
KQILNRFGFDCKNRNNDFVIHLENIDKIKKLIKMLEKF
HHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHCC
>Mature Secondary Structure 
GLNKDRGLSSLISDMDTVYSKELGFDKNQSTMIEIDQISPNPFQPRKNFDQEALDELAN
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHH
SIKEFGLIQPIIVFKKNNKFILIAGERRLRAVKALGKKEILAFIADIDENKLRELALIEN
HHHHCCCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
IQRENLNPIELANSYKDLMQVHKITQENLAELIHKSRTQITNTLRLLNLDIRTQELIASG
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
KISQGHAKVLVGLDQKDEKMLVDSIIGQKLNVRDTEKIVKKIKNNESLPNQEFEDEIKKL
CCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
KQILNRFGFDCKNRNNDFVIHLENIDKIKKLIKMLEKF
HHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10688204 [H]