Click here to switch to the map view.

The map label for this gene is soj [H]

Identifier: 153952401

GI number: 153952401

Start: 110184

End: 110969

Strand: Direct

Name: soj [H]

Synonym: JJD26997_0107

Alternate gene names: 153952401

Gene position: 110184-110969 (Clockwise)

Preceding gene: 153951936

Following gene: 153952129

Centisome position: 5.97

GC content: 31.04

Gene sequence:

>786_bases
ATGAGCGAAATTATTACAATAGCAAATCAAAAAGGTGGAGTAGGAAAGACTACAACAGCAGTAAATTTAGCCGCTTCTTT
GGCTGTGGCTGAAAAAAAAGTACTTTTGATTGATGTTGATCCGCAAGCTAATGCGACTACAGGACTTGGTTTTAATCGTA
ATAATTATGAGTATAATATTTATCATGTTTTTATAGGAAGAAAAAAGCTTTCAGATATTATTTTAAAAACAGAATTGCCA
CAACTTCATTTAGCTCCTTCAAATATAGGTCTTGTAGGTATAGAACAAGAGCTTGCTAAAGGTGAAAATAATGAGAAAAA
AATGCTGCTTAAAAATCAAATTCAAGAAGTGATTGATGAGTATGATTTTATTATTATTGATTCTCCACCTGCTCTTGGAA
GTATTACTATAAATGCTTTTGCAGCAAGCGATAGCGTAATTATCCCTATACAGTGTGAATTTTATGCGCTTGAGGGTGTA
GCTATGGTTTTAAATACAATTAAAATTATCAAAAAAACTATTAATTCTAAACTCAGGGTTCGTGGATTTTTACCGACAAT
GTATAGCTCTCAAAATAATCTTTCTAAAGATGTTGTAGATGATTTGAAACAAAATTTTAAAAAACAACTTTTTACTATTA
ATGGAAACGAAGATGATTTTATTGTGATCCCTCGCAATGTAAAACTTGCAGAAAGTCCAAGTTTTGGAAAGCCTATAATT
CTTTATGATATTAAATCGCCAGGTTCTGTTGCTTATCAAAATTTGGCGTATTCTATATTGGGATGA

Upstream 100 bases:

>100_bases
TTAGCGTCCATCATGAAGGTAAAGTTTTTTCACTTGAAAATTCTTTTTTGTATGAAGATGGTTCAATTTTACTAGGTGAT
AAAAGGGTGTATAGTTTAAG

Downstream 100 bases:

>100_bases
TTATAATGGGGTTAAATAAAGATAGGGGTTTAAGCAGTTTAATCAGTGATATGGATACTGTTTACAGTAAAGAATTGGGT
TTTGATAAAAATCAAAGCAC

Product: ParA family chromosome partitioning ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MSEIITIANQKGGVGKTTTAVNLAASLAVAEKKVLLIDVDPQANATTGLGFNRNNYEYNIYHVFIGRKKLSDIILKTELP
QLHLAPSNIGLVGIEQELAKGENNEKKMLLKNQIQEVIDEYDFIIIDSPPALGSITINAFAASDSVIIPIQCEFYALEGV
AMVLNTIKIIKKTINSKLRVRGFLPTMYSSQNNLSKDVVDDLKQNFKKQLFTINGNEDDFIVIPRNVKLAESPSFGKPII
LYDIKSPGSVAYQNLAYSILG

Sequences:

>Translated_261_residues
MSEIITIANQKGGVGKTTTAVNLAASLAVAEKKVLLIDVDPQANATTGLGFNRNNYEYNIYHVFIGRKKLSDIILKTELP
QLHLAPSNIGLVGIEQELAKGENNEKKMLLKNQIQEVIDEYDFIIIDSPPALGSITINAFAASDSVIIPIQCEFYALEGV
AMVLNTIKIIKKTINSKLRVRGFLPTMYSSQNNLSKDVVDDLKQNFKKQLFTINGNEDDFIVIPRNVKLAESPSFGKPII
LYDIKSPGSVAYQNLAYSILG
>Mature_260_residues
SEIITIANQKGGVGKTTTAVNLAASLAVAEKKVLLIDVDPQANATTGLGFNRNNYEYNIYHVFIGRKKLSDIILKTELPQ
LHLAPSNIGLVGIEQELAKGENNEKKMLLKNQIQEVIDEYDFIIIDSPPALGSITINAFAASDSVIIPIQCEFYALEGVA
MVLNTIKIIKKTINSKLRVRGFLPTMYSSQNNLSKDVVDDLKQNFKKQLFTINGNEDDFIVIPRNVKLAESPSFGKPIIL
YDIKSPGSVAYQNLAYSILG

Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 28732; Mature: 28600

Theoretical pI: Translated: 7.49; Mature: 7.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEIITIANQKGGVGKTTTAVNLAASLAVAEKKVLLIDVDPQANATTGLGFNRNNYEYNI
CCCEEEEECCCCCCCCCHHHHHHHHHHEEECCEEEEEECCCCCCCCCCCCCCCCCEEEEE
YHVFIGRKKLSDIILKTELPQLHLAPSNIGLVGIEQELAKGENNEKKMLLKNQIQEVIDE
EEEEECCHHHHHEEEECCCCEEEECCCCCEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHC
YDFIIIDSPPALGSITINAFAASDSVIIPIQCEFYALEGVAMVLNTIKIIKKTINSKLRV
CCEEEEECCCCCCEEEEEEEECCCCEEEEEEEEEEEECHHHHHHHHHHHHHHHHCCCEEE
RGFLPTMYSSQNNLSKDVVDDLKQNFKKQLFTINGNEDDFIVIPRNVKLAESPSFGKPII
EEECCHHHCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCEEEECCCEEEECCCCCCCCEE
LYDIKSPGSVAYQNLAYSILG
EEEECCCCCHHHHHHEEEECC
>Mature Secondary Structure 
SEIITIANQKGGVGKTTTAVNLAASLAVAEKKVLLIDVDPQANATTGLGFNRNNYEYNI
CCEEEEECCCCCCCCCHHHHHHHHHHEEECCEEEEEECCCCCCCCCCCCCCCCCEEEEE
YHVFIGRKKLSDIILKTELPQLHLAPSNIGLVGIEQELAKGENNEKKMLLKNQIQEVIDE
EEEEECCHHHHHEEEECCCCEEEECCCCCEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHC
YDFIIIDSPPALGSITINAFAASDSVIIPIQCEFYALEGVAMVLNTIKIIKKTINSKLRV
CCEEEEECCCCCCEEEEEEEECCCCEEEEEEEEEEEECHHHHHHHHHHHHHHHHCCCEEE
RGFLPTMYSSQNNLSKDVVDDLKQNFKKQLFTINGNEDDFIVIPRNVKLAESPSFGKPII
EEECCHHHCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCEEEECCCEEEECCCCCCCCEE
LYDIKSPGSVAYQNLAYSILG
EEEECCCCCHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]