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The map label for this gene is yrdA [H]

Identifier: 153951954

GI number: 153951954

Start: 212519

End: 213067

Strand: Direct

Name: yrdA [H]

Synonym: JJD26997_0228

Alternate gene names: 153951954

Gene position: 212519-213067 (Clockwise)

Preceding gene: 153952018

Following gene: 153952251

Centisome position: 11.52

GC content: 32.79

Gene sequence:

>549_bases
ATGCTTATCAAATTTAAAAATCACAGTCCCAAACTAGGTCAAAATATTTTTGTTGCAGAGGGCGCTAAAATCATAGGAGA
AATAGAAATAGGAGATGAAAGTAGCATTTGGTTTAATTGTGTTTTAAGAGCCGATGTTAATTTTATAAAAATTGGCAAAA
GAACTAATATTCAAGATCTTAGCACGGTGCATGTTTGGCATAGAGAATTTGATGAAAAAGGAAAGTTAAAAGATGCTGGT
TTTCCTACGATAATAGGAGATGATGTAACCATAGGGCATAATTGCGTTATCCATGCTTGTGTGATAAAAAATCGTGTTTT
AATCGGAATGAATGCTGTTATCATGGATAATGCTTTGATAGAAGAAGATAGCATAGTAGGTGCTGGAAGTGTTGTAACAA
AGGGTAAAAAATTTCCGCCACGCTCTTTGATACTTGGAAATCCTGCAAAATTTGTGCGTAAATTAAACGATGAAGAAGTA
AGATTTCTAAAACAATCCGCTTTAAATTATGTGGATTTTAAAAACGAGTTTTTAAAAGATCTTCAGTGA

Upstream 100 bases:

>100_bases
AAATGCGTTCATTACTTCTCCTATAAATTTAAATAAAAATTGTAACTAAAAAAGTTGAAATAGAGTTAAACTTAGCTATA
CTTAAATAAAAAGGAAAAAA

Downstream 100 bases:

>100_bases
TATTTTGAAGTTTAGGCGAGAGTTTTACTTCAAATTTCACAAAACGATCAAGATCTAAAAAACTCTCATCTAGTTTTGAA
ATTTGCTCTTTTGTATAATC

Product: hexapaptide repeat-containing transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MLIKFKNHSPKLGQNIFVAEGAKIIGEIEIGDESSIWFNCVLRADVNFIKIGKRTNIQDLSTVHVWHREFDEKGKLKDAG
FPTIIGDDVTIGHNCVIHACVIKNRVLIGMNAVIMDNALIEEDSIVGAGSVVTKGKKFPPRSLILGNPAKFVRKLNDEEV
RFLKQSALNYVDFKNEFLKDLQ

Sequences:

>Translated_182_residues
MLIKFKNHSPKLGQNIFVAEGAKIIGEIEIGDESSIWFNCVLRADVNFIKIGKRTNIQDLSTVHVWHREFDEKGKLKDAG
FPTIIGDDVTIGHNCVIHACVIKNRVLIGMNAVIMDNALIEEDSIVGAGSVVTKGKKFPPRSLILGNPAKFVRKLNDEEV
RFLKQSALNYVDFKNEFLKDLQ
>Mature_182_residues
MLIKFKNHSPKLGQNIFVAEGAKIIGEIEIGDESSIWFNCVLRADVNFIKIGKRTNIQDLSTVHVWHREFDEKGKLKDAG
FPTIIGDDVTIGHNCVIHACVIKNRVLIGMNAVIMDNALIEEDSIVGAGSVVTKGKKFPPRSLILGNPAKFVRKLNDEEV
RFLKQSALNYVDFKNEFLKDLQ

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=178, Percent_Identity=41.0112359550562, Blast_Score=159, Evalue=1e-40,
Organism=Escherichia coli, GI1787667, Length=165, Percent_Identity=35.7575757575758, Blast_Score=107, Evalue=6e-25,
Organism=Escherichia coli, GI87081681, Length=169, Percent_Identity=32.5443786982249, Blast_Score=91, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20390; Mature: 20390

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIKFKNHSPKLGQNIFVAEGAKIIGEIEIGDESSIWFNCVLRADVNFIKIGKRTNIQDL
CEEEECCCCCCCCCEEEEECCCEEEEEEEECCCCCEEEEEEEECCCCEEEECCCCCCCHH
STVHVWHREFDEKGKLKDAGFPTIIGDDVTIGHNCVIHACVIKNRVLIGMNAVIMDNALI
HHHHHHHHHHCCCCCCCCCCCCEEECCCEEECCCCEEEEEECCCEEEEECCEEEECCCEE
EEDSIVGAGSVVTKGKKFPPRSLILGNPAKFVRKLNDEEVRFLKQSALNYVDFKNEFLKD
CCCCCCCCCCCEECCCCCCCCEEEECCHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHH
LQ
CC
>Mature Secondary Structure
MLIKFKNHSPKLGQNIFVAEGAKIIGEIEIGDESSIWFNCVLRADVNFIKIGKRTNIQDL
CEEEECCCCCCCCCEEEEECCCEEEEEEEECCCCCEEEEEEEECCCCEEEECCCCCCCHH
STVHVWHREFDEKGKLKDAGFPTIIGDDVTIGHNCVIHACVIKNRVLIGMNAVIMDNALI
HHHHHHHHHHCCCCCCCCCCCCEEECCCEEECCCCEEEEEECCCEEEEECCEEEECCCEE
EEDSIVGAGSVVTKGKKFPPRSLILGNPAKFVRKLNDEEVRFLKQSALNYVDFKNEFLKD
CCCCCCCCCCCEECCCCCCCCEEEECCHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHH
LQ
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]