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The map label for this gene is yebA [C]

Identifier: 153951237

GI number: 153951237

Start: 139275

End: 140648

Strand: Direct

Name: yebA [C]

Synonym: JJD26997_0144

Alternate gene names: 153951237

Gene position: 139275-140648 (Clockwise)

Preceding gene: 153950961

Following gene: 153951460

Centisome position: 7.55

GC content: 29.69

Gene sequence:

>1374_bases
ATGGCAAAAAGAAAAGGCAAAACTTATTTATCTGTTTTAATTTTAGTTTTAATAGCAATTTCGATTTTTTTTATTTCAAG
ATTAAGTATTTTTGAAAAAAATCCTCCTCAAATTTTAATGCCAGATGTTGTATATACTGATCTTAAAAAACCTATTTTAG
TGCATGTTAAAGATGATAAAAGTTCTATCAAAAATGTACAAATTATATTGTATAAAGATGACAATACTAGTGCAATGGTT
ATAGCAGATGAAAAGATTTCTAATTTAAAAGATATTACCTTACAAGTTGCTTTGCCAAAATTTGGTTACAAAGAAAATGT
AAAATCTTTTGTTTTAGAGGTGATAGCTAAAGATTCTAGTTTTTGGAATTTTTTTAGTGGCAATGAAGCAAGAAAACAAA
TTGCGGTATTAGTAGATAATACGGCTCCAAAAATCAATATCATAAGCAATTCTTATCAAATCGAGCAAGGCGGTGCCGGG
GCTGTTGTTTTTAAGGCTGATGATGTTAATTTAGATAAGGTGTATATAGAGACAAATAAAGGTAAAATTTTTAAAGCCAC
ACCTTATGTAAAAGAGGGGTATTATGCGGCTTTGATTGCTTGGGATGCAAGAGATGAGGAATTTCGCGCATTTGTTATCG
CTACGGATAAAGCGGGAAATATTTCAAAAGAACGTATAAGGTATTATTTTGTTAATCGTAAATATCTCGTTTCAAATATC
AATCTCACGGATAAATTTTTAGATGGAAAGATTGAGAATTTAGCAAATCAATATGCTCCAAAAGATAATAGTCTCAATCG
TTATGAAAAATTTAAGTTTATCAATGAAACTTTAAGAAATAGCAATGAAGAACTTATCCATGAAATCACTTCAAAAGTAC
CTGAGGAAAAAATTGATAATTTTGATTTGAATTTATTTTTGCCTCTTAAAAATGGTATGAAAGTAGCGGATTTTGCTGAT
CATAGGTATTATTCTTATAATGGGCAATTTGTGAGTGATTCTTATCACATGGGGATTGATCTAGCAAGCGTAGCACAAGC
TCCTATTATAAGCAATAATGCAGGCAAGGTTGTTTTTGCTGCTGAAAATGGAATTTATGGTTTAAATTTAATTGTTTATC
ATGGTTTTGGAGTGTATAGTCTTTATGGGCACTGTTCTTCTAAAAATGTTGATTTAGATGAAATGATTAATAAACAAAGC
ATTATAGGCAAAACAGGAACAAGTGGTTTAGCCTTAGGCGATCATTTGCATTTTGGAGTTTTGGTTCAAGGAGTTGAAAC
GCGTCCTGAACAATGGCAAGATAAAAAATGGATAGAAAATAATATTTACAATGTTTTAAATGATGGTAAAAAGATAATTT
TAGGAAAAAATTAA

Upstream 100 bases:

>100_bases
CTCTAAGAGAAATTTTATAAATTTGCTAGATATTTACTGAAAATATAATAGAATTTTATATTAAACACAACAAAAACATT
GAAAATTTTTAAGGAAGGTT

Downstream 100 bases:

>100_bases
TGAAACAATTAACTTTAGTAAAAACTGTCAAAGGTGTAGGTATAGGACTTCATAAGGGTGAACCCATAGAAATTACTTTA
GAACCTTTAGAAGCAAATAG

Product: M24/M37 family peptidase

Products: NA

Alternate protein names: Peptidase M; M24/M37 Family Peptidase; M23 Peptidase Domain Protein; M23/M37 Peptidase Domain-Containing Protein; Metallopeptidase; Membrane Peptidase; Metalloendopeptidase-Like Membrane Protein; Metalloendopeptidase Related Membrane Protein; M23 Peptidase Domain-Containing Protein; Cell Wall Endopeptidase Family; Lipoprotein NlpD Fragment; Lytic Transglycosylase Catalytic; M23/M37 Family Endopeptidase; M23 Family Peptidase; LysM Domain/M23/M37 Peptidase Domain-Containing Protein; LysM/M23/M37 Peptidase; Zinc Metalloendopeptidase; Cytoplasmic Membrane Protein; M23/M37 Family Metalloendoprotease; Tyrosyl-TRNA Synthetase; Peptidoglycan-Specific Endopeptidase; Phage Protein; Cell Wall Endopeptidase; Metalloprotease YebA; Periplasmic Protein; Lipoprotein

Number of amino acids: Translated: 457; Mature: 456

Protein sequence:

>457_residues
MAKRKGKTYLSVLILVLIAISIFFISRLSIFEKNPPQILMPDVVYTDLKKPILVHVKDDKSSIKNVQIILYKDDNTSAMV
IADEKISNLKDITLQVALPKFGYKENVKSFVLEVIAKDSSFWNFFSGNEARKQIAVLVDNTAPKINIISNSYQIEQGGAG
AVVFKADDVNLDKVYIETNKGKIFKATPYVKEGYYAALIAWDARDEEFRAFVIATDKAGNISKERIRYYFVNRKYLVSNI
NLTDKFLDGKIENLANQYAPKDNSLNRYEKFKFINETLRNSNEELIHEITSKVPEEKIDNFDLNLFLPLKNGMKVADFAD
HRYYSYNGQFVSDSYHMGIDLASVAQAPIISNNAGKVVFAAENGIYGLNLIVYHGFGVYSLYGHCSSKNVDLDEMINKQS
IIGKTGTSGLALGDHLHFGVLVQGVETRPEQWQDKKWIENNIYNVLNDGKKIILGKN

Sequences:

>Translated_457_residues
MAKRKGKTYLSVLILVLIAISIFFISRLSIFEKNPPQILMPDVVYTDLKKPILVHVKDDKSSIKNVQIILYKDDNTSAMV
IADEKISNLKDITLQVALPKFGYKENVKSFVLEVIAKDSSFWNFFSGNEARKQIAVLVDNTAPKINIISNSYQIEQGGAG
AVVFKADDVNLDKVYIETNKGKIFKATPYVKEGYYAALIAWDARDEEFRAFVIATDKAGNISKERIRYYFVNRKYLVSNI
NLTDKFLDGKIENLANQYAPKDNSLNRYEKFKFINETLRNSNEELIHEITSKVPEEKIDNFDLNLFLPLKNGMKVADFAD
HRYYSYNGQFVSDSYHMGIDLASVAQAPIISNNAGKVVFAAENGIYGLNLIVYHGFGVYSLYGHCSSKNVDLDEMINKQS
IIGKTGTSGLALGDHLHFGVLVQGVETRPEQWQDKKWIENNIYNVLNDGKKIILGKN
>Mature_456_residues
AKRKGKTYLSVLILVLIAISIFFISRLSIFEKNPPQILMPDVVYTDLKKPILVHVKDDKSSIKNVQIILYKDDNTSAMVI
ADEKISNLKDITLQVALPKFGYKENVKSFVLEVIAKDSSFWNFFSGNEARKQIAVLVDNTAPKINIISNSYQIEQGGAGA
VVFKADDVNLDKVYIETNKGKIFKATPYVKEGYYAALIAWDARDEEFRAFVIATDKAGNISKERIRYYFVNRKYLVSNIN
LTDKFLDGKIENLANQYAPKDNSLNRYEKFKFINETLRNSNEELIHEITSKVPEEKIDNFDLNLFLPLKNGMKVADFADH
RYYSYNGQFVSDSYHMGIDLASVAQAPIISNNAGKVVFAAENGIYGLNLIVYHGFGVYSLYGHCSSKNVDLDEMINKQSI
IGKTGTSGLALGDHLHFGVLVQGVETRPEQWQDKKWIENNIYNVLNDGKKIILGKN

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.24.- [C]

Molecular weight: Translated: 51683; Mature: 51552

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKRKGKTYLSVLILVLIAISIFFISRLSIFEKNPPQILMPDVVYTDLKKPILVHVKDDK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHCCCCCEEEEEECCC
SSIKNVQIILYKDDNTSAMVIADEKISNLKDITLQVALPKFGYKENVKSFVLEVIAKDSS
CCCCEEEEEEEECCCCCEEEEECHHHCCCEEEEEEEEECCCCCHHHHHHHHHHHHHCCCC
FWNFFSGNEARKQIAVLVDNTAPKINIISNSYQIEQGGAGAVVFKADDVNLDKVYIETNK
CEEECCCCCCCEEEEEEEECCCCEEEEEECCEEEECCCCEEEEEEECCCCEEEEEEECCC
GKIFKATPYVKEGYYAALIAWDARDEEFRAFVIATDKAGNISKERIRYYFVNRKYLVSNI
CEEEEECCCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCCCHHEEEEEEECCEEEEEEC
NLTDKFLDGKIENLANQYAPKDNSLNRYEKFKFINETLRNSNEELIHEITSKVPEEKIDN
CCHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHCCC
FDLNLFLPLKNGMKVADFADHRYYSYNGQFVSDSYHMGIDLASVAQAPIISNNAGKVVFA
CCEEEEEECCCCCEEEEECCCCEEEECCEEECCCEECCCCHHHHCCCCEEECCCCEEEEE
AENGIYGLNLIVYHGFGVYSLYGHCSSKNVDLDEMINKQSIIGKTGTSGLALGDHLHFGV
ECCCCEEEEEEEEECCCCEEEEECCCCCCCCHHHHHCHHHHCCCCCCCCCEECCCEEEEE
LVQGVETRPEQWQDKKWIENNIYNVLNDGKKIILGKN
EEECCCCCCCHHCCHHHHHHHHHHHHCCCCEEEEECC
>Mature Secondary Structure 
AKRKGKTYLSVLILVLIAISIFFISRLSIFEKNPPQILMPDVVYTDLKKPILVHVKDDK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHCCCCCEEEEEECCC
SSIKNVQIILYKDDNTSAMVIADEKISNLKDITLQVALPKFGYKENVKSFVLEVIAKDSS
CCCCEEEEEEEECCCCCEEEEECHHHCCCEEEEEEEEECCCCCHHHHHHHHHHHHHCCCC
FWNFFSGNEARKQIAVLVDNTAPKINIISNSYQIEQGGAGAVVFKADDVNLDKVYIETNK
CEEECCCCCCCEEEEEEEECCCCEEEEEECCEEEECCCCEEEEEEECCCCEEEEEEECCC
GKIFKATPYVKEGYYAALIAWDARDEEFRAFVIATDKAGNISKERIRYYFVNRKYLVSNI
CEEEEECCCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCCCHHEEEEEEECCEEEEEEC
NLTDKFLDGKIENLANQYAPKDNSLNRYEKFKFINETLRNSNEELIHEITSKVPEEKIDN
CCHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHCCC
FDLNLFLPLKNGMKVADFADHRYYSYNGQFVSDSYHMGIDLASVAQAPIISNNAGKVVFA
CCEEEEEECCCCCEEEEECCCCEEEECCEEECCCEECCCCHHHHCCCCEEECCCCEEEEE
AENGIYGLNLIVYHGFGVYSLYGHCSSKNVDLDEMINKQSIIGKTGTSGLALGDHLHFGV
ECCCCEEEEEEEEECCCCEEEEECCCCCCCCHHHHHCHHHHCCCCCCCCCEECCCEEEEE
LVQGVETRPEQWQDKKWIENNIYNVLNDGKKIILGKN
EEECCCCCCCHHCCHHHHHHHHHHHHCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA