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The map label for this gene is bdlA [H]

Identifier: 153951158

GI number: 153951158

Start: 552345

End: 553634

Strand: Direct

Name: bdlA [H]

Synonym: JJD26997_0612

Alternate gene names: 153951158

Gene position: 552345-553634 (Clockwise)

Preceding gene: 153951037

Following gene: 153951903

Centisome position: 29.94

GC content: 31.47

Gene sequence:

>1290_bases
ATGTTTGGTGCTAGGAAAAATAATACTGAAATAATTGAACAACTTGAAAAAAAGTGTAATGGTTTAGGAGATATTTTAAG
ATCTATTGGGAATACTATGGCAGTAATTGAATTTACCACCGATGGTGTTATTTTAGAGGCAAATCAAAATTTTTTAACAA
CTATGAAATATTCCCTTTCAGAGGTCAAGGGCAAGCATCATAGTATGTTTTGTTTGCCTGAAGTTGTTAATTCTTCAGCA
TATAGTGATTTTTGGAAAGATTTAAGAGATGGAAAAGCTAGAAGTGGTCTTTTTAGACGTATAGCTAAGGGAGGGATAGA
TGTTTATTTAGAGGCAAATTATCTTCCAATTAGCGATAATAATGGTCATGTTTATAAAATTATTAAATTTGCCAATGATA
TAACTCAAAGACATTACGAAATGCTTGATCTTAGAAATACTATTGCTGCTGCTAATCGTTCTATGGCTATTATTGAATTT
AAACCTGATGGGACTATTATTACGGCTAATGAAAATTTTTTAAGAACTATGGATTTTAATATTGATGAGATTAAAGGAAA
GCATCATAGTATGTTCTGTGATTCTAATTATAGACACTCTAAGGACTATGTTCAATTTTGGGAAGATTTAAGAGAGGGTA
AATTTCAATCAGGTAAATATATAAGATACGGAAGAAATAATAAAAAAGTATACCTTGAAGCAAGTTATAATCCGGTTAAA
AATGATGATGGAAAAATTTACAAGGTTATTAAATTTGCTACAGATATAAGCGAACAAGTTAAAAAAGATCAAGAAAAACT
TCGCCTCATAAGCGAACTTGCAGAAAAAAATGATAATCTTACTCAAGATGGAGATCGTGTAATTGAAAACACTGTTTCAA
ATGTTCAGAATATTGCCGATATGATGTCTCAAAGTTCAAATCTTGTTTCCTCATTAAATCAACAATCAGATGAAATTAAA
TCTATTATTCAGACTATTAGTGATATCGCTGATCAAACTAATCTGCTTGCTTTAAATGCTGCTATTGAGGCAGCACGTGC
TGGTGAACATGGTAGAGGTTTTGCTGTTGTTGCTGATGAAGTAAGAAATTTAGCTGAAAGAACAGGGCATTCAGTTAATG
AAATTACCACGACCATTAATTCTATTCGTAATGTTACATCACAAGTTGTTGAGAGTATTAAAAGCGGTTTAGAGGATGTT
AATCAGAGTGTTGAACTTGCAAAAGAAGCAAGAGAATGTATGGAGAAAATTCGTGAAAGCTCTACTGAAGTTGCTAAAGC
AATGTCATAA

Upstream 100 bases:

>100_bases
GGGTATATTTAACTTATAAATTAATATAATTTTTAAGTAAATAATACTATATAAATATGATATAATTTTAAAATAATTTA
TTATTGAAAAGGTGAGTTTT

Downstream 100 bases:

>100_bases
GCGTGGTTTTCACGCTTATTTTTTAAGTAATTAAATCTTTAAAATTTTTAAAACCACTTTCTTGATTGCATTTTTCTTTT
AAAATATTTAAAAATTCTTT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: Chemotaxis regulator BdlA [H]

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MFGARKNNTEIIEQLEKKCNGLGDILRSIGNTMAVIEFTTDGVILEANQNFLTTMKYSLSEVKGKHHSMFCLPEVVNSSA
YSDFWKDLRDGKARSGLFRRIAKGGIDVYLEANYLPISDNNGHVYKIIKFANDITQRHYEMLDLRNTIAAANRSMAIIEF
KPDGTIITANENFLRTMDFNIDEIKGKHHSMFCDSNYRHSKDYVQFWEDLREGKFQSGKYIRYGRNNKKVYLEASYNPVK
NDDGKIYKVIKFATDISEQVKKDQEKLRLISELAEKNDNLTQDGDRVIENTVSNVQNIADMMSQSSNLVSSLNQQSDEIK
SIIQTISDIADQTNLLALNAAIEAARAGEHGRGFAVVADEVRNLAERTGHSVNEITTTINSIRNVTSQVVESIKSGLEDV
NQSVELAKEARECMEKIRESSTEVAKAMS

Sequences:

>Translated_429_residues
MFGARKNNTEIIEQLEKKCNGLGDILRSIGNTMAVIEFTTDGVILEANQNFLTTMKYSLSEVKGKHHSMFCLPEVVNSSA
YSDFWKDLRDGKARSGLFRRIAKGGIDVYLEANYLPISDNNGHVYKIIKFANDITQRHYEMLDLRNTIAAANRSMAIIEF
KPDGTIITANENFLRTMDFNIDEIKGKHHSMFCDSNYRHSKDYVQFWEDLREGKFQSGKYIRYGRNNKKVYLEASYNPVK
NDDGKIYKVIKFATDISEQVKKDQEKLRLISELAEKNDNLTQDGDRVIENTVSNVQNIADMMSQSSNLVSSLNQQSDEIK
SIIQTISDIADQTNLLALNAAIEAARAGEHGRGFAVVADEVRNLAERTGHSVNEITTTINSIRNVTSQVVESIKSGLEDV
NQSVELAKEARECMEKIRESSTEVAKAMS
>Mature_429_residues
MFGARKNNTEIIEQLEKKCNGLGDILRSIGNTMAVIEFTTDGVILEANQNFLTTMKYSLSEVKGKHHSMFCLPEVVNSSA
YSDFWKDLRDGKARSGLFRRIAKGGIDVYLEANYLPISDNNGHVYKIIKFANDITQRHYEMLDLRNTIAAANRSMAIIEF
KPDGTIITANENFLRTMDFNIDEIKGKHHSMFCDSNYRHSKDYVQFWEDLREGKFQSGKYIRYGRNNKKVYLEASYNPVK
NDDGKIYKVIKFATDISEQVKKDQEKLRLISELAEKNDNLTQDGDRVIENTVSNVQNIADMMSQSSNLVSSLNQQSDEIK
SIIQTISDIADQTNLLALNAAIEAARAGEHGRGFAVVADEVRNLAERTGHSVNEITTTINSIRNVTSQVVESIKSGLEDV
NQSVELAKEARECMEKIRESSTEVAKAMS

Specific function: Essential for biofilm dispersion by sensing environmental cues. May be involved in sensing and transducing signals within cells, resulting in the modulation of c-di-GMP levels, swimming motility and adhesiveness of the bacterial cell surface [H]

COG id: COG2202

COG function: function code T; FOG: PAS/PAC domain

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=175, Percent_Identity=37.7142857142857, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI2367378, Length=152, Percent_Identity=40.1315789473684, Blast_Score=92, Evalue=6e-20,
Organism=Escherichia coli, GI1788194, Length=121, Percent_Identity=42.1487603305785, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI1789453, Length=210, Percent_Identity=32.8571428571429, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1787690, Length=129, Percent_Identity=37.984496124031, Blast_Score=78, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013656
- InterPro:   IPR013655 [H]

Pfam domain/function: PF00015 MCPsignal; PF08447 PAS_3; PF08448 PAS_4 [H]

EC number: NA

Molecular weight: Translated: 48400; Mature: 48400

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: PS50113 PAC ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGARKNNTEIIEQLEKKCNGLGDILRSIGNTMAVIEFTTDGVILEANQNFLTTMKYSLS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEECCCCHHHHHHHHHH
EVKGKHHSMFCLPEVVNSSAYSDFWKDLRDGKARSGLFRRIAKGGIDVYLEANYLPISDN
HHCCCCCCEEECHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEECEEEECCC
NGHVYKIIKFANDITQRHYEMLDLRNTIAAANRSMAIIEFKPDGTIITANENFLRTMDFN
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCEEEEECCC
IDEIKGKHHSMFCDSNYRHSKDYVQFWEDLREGKFQSGKYIRYGRNNKKVYLEASYNPVK
HHHHCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEECCCCCC
NDDGKIYKVIKFATDISEQVKKDQEKLRLISELAEKNDNLTQDGDRVIENTVSNVQNIAD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
MMSQSSNLVSSLNQQSDEIKSIIQTISDIADQTNLLALNAAIEAARAGEHGRGFAVVADE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCEEEHHHH
VRNLAERTGHSVNEITTTINSIRNVTSQVVESIKSGLEDVNQSVELAKEARECMEKIRES
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STEVAKAMS
HHHHHHHCC
>Mature Secondary Structure
MFGARKNNTEIIEQLEKKCNGLGDILRSIGNTMAVIEFTTDGVILEANQNFLTTMKYSLS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEECCCCHHHHHHHHHH
EVKGKHHSMFCLPEVVNSSAYSDFWKDLRDGKARSGLFRRIAKGGIDVYLEANYLPISDN
HHCCCCCCEEECHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEECEEEECCC
NGHVYKIIKFANDITQRHYEMLDLRNTIAAANRSMAIIEFKPDGTIITANENFLRTMDFN
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCEEEEECCC
IDEIKGKHHSMFCDSNYRHSKDYVQFWEDLREGKFQSGKYIRYGRNNKKVYLEASYNPVK
HHHHCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEECCCCCC
NDDGKIYKVIKFATDISEQVKKDQEKLRLISELAEKNDNLTQDGDRVIENTVSNVQNIAD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
MMSQSSNLVSSLNQQSDEIKSIIQTISDIADQTNLLALNAAIEAARAGEHGRGFAVVADE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCEEEHHHH
VRNLAERTGHSVNEITTTINSIRNVTSQVVESIKSGLEDVNQSVELAKEARECMEKIRES
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STEVAKAMS
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]