| Definition | Campylobacter jejuni subsp. doylei 269.97, complete genome. |
|---|---|
| Accession | NC_009707 |
| Length | 1,845,106 |
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The map label for this gene is leuS [H]
Identifier: 153951097
GI number: 153951097
Start: 573386
End: 575815
Strand: Direct
Name: leuS [H]
Synonym: JJD26997_0632
Alternate gene names: 153951097
Gene position: 573386-575815 (Clockwise)
Preceding gene: 153951817
Following gene: 153951565
Centisome position: 31.08
GC content: 31.11
Gene sequence:
>2430_bases ATGGCTTATGAAGCAAGTTTAATAGAAAAAAAATGGCAAAAAATTTGGGATGAAAATGAATATTTTGAGCCAAAAGATGA TTTAAATTTGCCTAAAAAATATATTTTATCGATGTTTCCTTATCCTAGCGGACGCATTCACATGGGGCATGTAAGAAATT ATACTATAGGCGATGCTTTAGCAAGATATTATCGCAAGATAGGATTTAATGTTTTACATCCTATAGGTTTTGATAGTTTT GGTATGCCTGCTGAAAATGCAGCTATTAAGCATAAAATTCATCCTAAGTCATGGACTTATGAAAATATAGCTTATATGAA AAAAGAACTTTTTTCTTTAGGTTTTTCTTTTTCTAAAAAAAGAATGCTTGCTACTTCAGATCCACTTTATACAAAATTTG AGCAAGAAATTTTTATTAAGATGTTTGAAAAAGGTTTGATTTACACTAAAGAAGCAAATGTAAATTGGTGTGAACAAGAT CAAACGGTTTTGGCTAATGAGCAAGTTGAAGACGGAAAATGTTGGCGTTGTGGTCATGAAGTGGTGCAGAAAAAAATGCC AGGTTATTATGTAAAAATCACTGCTTATGCTGAGAAACTTTTAAAAGATTTAGAAGGGTTGAGGGATAAATGGCCTAATC AAGTTTTAACTATGCAAGAAAATTGGATAGGTAAAAGCGAAGGTTTGGCATTTTCTTTAAATTTAGACGAGAAAAGCAAG CAAAAAGCCAAAGAAAGTTCTTTAGAAGTTTTTACTACAAGAGCAGATACAATTTATGGAGTTTCGTATGTCGCTTTAGC CCCAGAACATAAAATCGTTCAAAATTTGCTTTTACAAAATTTATTAAATCAAGATGTATTAAATAAAATCAAAGCTATTC AAAATCAAAGTCCAAGAGAAAGACAAAGTTCTGAAAAAGAAGGTTATTTTTTAGGAATTTATGCCATTCATCCTTTAAGT GGAGAAAAAATTCCTTTGTGGGTGGCTAATTTTGTTTTATCTGATTATGGTAGCGGAGCGGTTATGGCTGTTCCAGCTCA TGATGAAAGAGATTTTGAATTTGCAAAAAAATACAATCTTGCCATCAAACAAGTCATTCAAACACAAGAAAATTTGCCTT ATACGCAAAAATTAGGAAAATTAATTCATAGTCAAGAATTTGATAATCTTGATTGTAATGAAGCAAGATTAAAAATCATT TCTCAGTTTGAAGCTAAGAATATTGGAAAAAGGGTTGTAAATTTTAAAATTCGTGATTGGGGTGTTTCACGCCAAAGATA TTGGGGTGCGCCTATTCCTATGATTAAATGTCAAAGTTGTGGTATAGCACCTCAAAAACTAGAAAATTTACCTATTACCT TACCTGAAGATGTACAAATTACAGGTGAGGGTAATCCACTCGATAAACATCCAACTTGGAAAAATTGTATCTGTCCAAAA TGTGGCAAAGAGGCTCAAAAAGAAAGTGATACTTTAGATACTTTTTTTGAAAGTTCTTGGTATTTTGCACGTTTTGCAAG TGATGAGAAAACTTGGCAGGAAAAAGCTTTAGATGAAAAAAGTGTGAAGTATTGGATGAGTGTGGATCAATATATAGGTG GTATTGAACATGCAATCTTACATTTACTTTATGCGAGATTTTTCCAAAAAGCTTTAAGAGACTTGGGTTATTTAACACAA AATGAACCTTTTGATAGACTTTTAACTCAGGGTATGGTGTTAAAAGATGGTGCTAAAATGTCAAAATCAAAAGGCAATGT TGTGGATCCTGATGAGATTATAGAAAAATATGGTGCTGATACTGCAAGACTTTTTATGCTTTTTGCTGCACCTCCAGCTA AAGAACTTGAATGGAATGATGATGCGGTTGAAGGGGCTTATAGATTTATTTGTAAACTCTATGATAGGGCGCAAAATATT AAAAAAGGTGAGCTTGTAGAATTAAAACAAGAAAATTTAAATAAAGAAGAAAAATATGCAAGATTAAAGGTATATGAAGC TTTGAAAAAATCCGAAGAAGTTTATCATCAGAGTTTTGCTTTTAACACTTTAATTGCAGCTTGTATGGAAGCTTTAAATG CTTTAGCTCTTTGTAAAAATGAGGCTTTAGAACAAGAGGCTTTTTATATTATTTTAAATATCTTAGAGCCTATTATTCCT CATGTTTGTTTTGAGCTTAGCGAGGAGCTTTTTAAATGTAAAAATTTCAAAAAATTAGAACTTAAAGAAGAGGTTTTTGT AAAAGATACTTTAAATTTAGCTGTAAGTATTAATGGTAAAAAAAGGGCTGAATTTAAAATTTCAAGTAGTGCGAGTAAAG AAGAAATTTTAGCTTTTGCAAAAGAAAATACTGCTAAATGGCTTGAAGGTAAAAGCATAGTTAAAGAAATTTATGTGGAA GGAAAGCTAGTTAATCTAGTGATTAAATGA
Upstream 100 bases:
>100_bases GCTTGAGTTTAGAAATAAAGAAATTGAAAAAGCAAAAAGAAAACAAGATCAAGAACGCAATCGTGCAATGTATGAAAAAG GAACAGTGTAAGGAGAATTT
Downstream 100 bases:
>100_bases AAAAGATTTTAATTTTTTGTATAGGTTTATTTTTAGGTGCTTGTGGGTATGTTCCTACATCAAAAATCGCTAATAATATT TTCGATGAGAAAGTTTATGT
Product: leucyl-tRNA synthetase
Products: NA
Alternate protein names: Leucine--tRNA ligase; LeuRS [H]
Number of amino acids: Translated: 809; Mature: 808
Protein sequence:
>809_residues MAYEASLIEKKWQKIWDENEYFEPKDDLNLPKKYILSMFPYPSGRIHMGHVRNYTIGDALARYYRKIGFNVLHPIGFDSF GMPAENAAIKHKIHPKSWTYENIAYMKKELFSLGFSFSKKRMLATSDPLYTKFEQEIFIKMFEKGLIYTKEANVNWCEQD QTVLANEQVEDGKCWRCGHEVVQKKMPGYYVKITAYAEKLLKDLEGLRDKWPNQVLTMQENWIGKSEGLAFSLNLDEKSK QKAKESSLEVFTTRADTIYGVSYVALAPEHKIVQNLLLQNLLNQDVLNKIKAIQNQSPRERQSSEKEGYFLGIYAIHPLS GEKIPLWVANFVLSDYGSGAVMAVPAHDERDFEFAKKYNLAIKQVIQTQENLPYTQKLGKLIHSQEFDNLDCNEARLKII SQFEAKNIGKRVVNFKIRDWGVSRQRYWGAPIPMIKCQSCGIAPQKLENLPITLPEDVQITGEGNPLDKHPTWKNCICPK CGKEAQKESDTLDTFFESSWYFARFASDEKTWQEKALDEKSVKYWMSVDQYIGGIEHAILHLLYARFFQKALRDLGYLTQ NEPFDRLLTQGMVLKDGAKMSKSKGNVVDPDEIIEKYGADTARLFMLFAAPPAKELEWNDDAVEGAYRFICKLYDRAQNI KKGELVELKQENLNKEEKYARLKVYEALKKSEEVYHQSFAFNTLIAACMEALNALALCKNEALEQEAFYIILNILEPIIP HVCFELSEELFKCKNFKKLELKEEVFVKDTLNLAVSINGKKRAEFKISSSASKEEILAFAKENTAKWLEGKSIVKEIYVE GKLVNLVIK
Sequences:
>Translated_809_residues MAYEASLIEKKWQKIWDENEYFEPKDDLNLPKKYILSMFPYPSGRIHMGHVRNYTIGDALARYYRKIGFNVLHPIGFDSF GMPAENAAIKHKIHPKSWTYENIAYMKKELFSLGFSFSKKRMLATSDPLYTKFEQEIFIKMFEKGLIYTKEANVNWCEQD QTVLANEQVEDGKCWRCGHEVVQKKMPGYYVKITAYAEKLLKDLEGLRDKWPNQVLTMQENWIGKSEGLAFSLNLDEKSK QKAKESSLEVFTTRADTIYGVSYVALAPEHKIVQNLLLQNLLNQDVLNKIKAIQNQSPRERQSSEKEGYFLGIYAIHPLS GEKIPLWVANFVLSDYGSGAVMAVPAHDERDFEFAKKYNLAIKQVIQTQENLPYTQKLGKLIHSQEFDNLDCNEARLKII SQFEAKNIGKRVVNFKIRDWGVSRQRYWGAPIPMIKCQSCGIAPQKLENLPITLPEDVQITGEGNPLDKHPTWKNCICPK CGKEAQKESDTLDTFFESSWYFARFASDEKTWQEKALDEKSVKYWMSVDQYIGGIEHAILHLLYARFFQKALRDLGYLTQ NEPFDRLLTQGMVLKDGAKMSKSKGNVVDPDEIIEKYGADTARLFMLFAAPPAKELEWNDDAVEGAYRFICKLYDRAQNI KKGELVELKQENLNKEEKYARLKVYEALKKSEEVYHQSFAFNTLIAACMEALNALALCKNEALEQEAFYIILNILEPIIP HVCFELSEELFKCKNFKKLELKEEVFVKDTLNLAVSINGKKRAEFKISSSASKEEILAFAKENTAKWLEGKSIVKEIYVE GKLVNLVIK >Mature_808_residues AYEASLIEKKWQKIWDENEYFEPKDDLNLPKKYILSMFPYPSGRIHMGHVRNYTIGDALARYYRKIGFNVLHPIGFDSFG MPAENAAIKHKIHPKSWTYENIAYMKKELFSLGFSFSKKRMLATSDPLYTKFEQEIFIKMFEKGLIYTKEANVNWCEQDQ TVLANEQVEDGKCWRCGHEVVQKKMPGYYVKITAYAEKLLKDLEGLRDKWPNQVLTMQENWIGKSEGLAFSLNLDEKSKQ KAKESSLEVFTTRADTIYGVSYVALAPEHKIVQNLLLQNLLNQDVLNKIKAIQNQSPRERQSSEKEGYFLGIYAIHPLSG EKIPLWVANFVLSDYGSGAVMAVPAHDERDFEFAKKYNLAIKQVIQTQENLPYTQKLGKLIHSQEFDNLDCNEARLKIIS QFEAKNIGKRVVNFKIRDWGVSRQRYWGAPIPMIKCQSCGIAPQKLENLPITLPEDVQITGEGNPLDKHPTWKNCICPKC GKEAQKESDTLDTFFESSWYFARFASDEKTWQEKALDEKSVKYWMSVDQYIGGIEHAILHLLYARFFQKALRDLGYLTQN EPFDRLLTQGMVLKDGAKMSKSKGNVVDPDEIIEKYGADTARLFMLFAAPPAKELEWNDDAVEGAYRFICKLYDRAQNIK KGELVELKQENLNKEEKYARLKVYEALKKSEEVYHQSFAFNTLIAACMEALNALALCKNEALEQEAFYIILNILEPIIPH VCFELSEELFKCKNFKKLELKEEVFVKDTLNLAVSINGKKRAEFKISSSASKEEILAFAKENTAKWLEGKSIVKEIYVEG KLVNLVIK
Specific function: Unknown
COG id: COG0495
COG function: function code J; Leucyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI7661872, Length=879, Percent_Identity=32.7645051194539, Blast_Score=462, Evalue=1e-130, Organism=Homo sapiens, GI94721239, Length=261, Percent_Identity=30.2681992337165, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI94721241, Length=261, Percent_Identity=30.2681992337165, Blast_Score=72, Evalue=2e-12, Organism=Escherichia coli, GI1786861, Length=868, Percent_Identity=43.2027649769585, Blast_Score=708, Evalue=0.0, Organism=Escherichia coli, GI1790708, Length=227, Percent_Identity=26.431718061674, Blast_Score=75, Evalue=1e-14, Organism=Caenorhabditis elegans, GI71997510, Length=694, Percent_Identity=31.5561959654179, Blast_Score=300, Evalue=3e-81, Organism=Caenorhabditis elegans, GI71997517, Length=694, Percent_Identity=31.5561959654179, Blast_Score=299, Evalue=4e-81, Organism=Caenorhabditis elegans, GI212645227, Length=216, Percent_Identity=33.7962962962963, Blast_Score=100, Evalue=3e-21, Organism=Saccharomyces cerevisiae, GI6323414, Length=782, Percent_Identity=38.2352941176471, Blast_Score=482, Evalue=1e-136, Organism=Saccharomyces cerevisiae, GI6321531, Length=692, Percent_Identity=22.5433526011561, Blast_Score=105, Evalue=2e-23, Organism=Drosophila melanogaster, GI21355409, Length=864, Percent_Identity=31.25, Blast_Score=380, Evalue=1e-105, Organism=Drosophila melanogaster, GI17864482, Length=440, Percent_Identity=22.0454545454545, Blast_Score=101, Evalue=2e-21, Organism=Drosophila melanogaster, GI24653289, Length=440, Percent_Identity=22.0454545454545, Blast_Score=101, Evalue=2e-21,
Paralogues:
None
Copy number: 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR002300 - InterPro: IPR002302 - InterPro: IPR014729 - InterPro: IPR009080 - InterPro: IPR009008 [H]
Pfam domain/function: PF00133 tRNA-synt_1 [H]
EC number: =6.1.1.4 [H]
Molecular weight: Translated: 93269; Mature: 93138
Theoretical pI: Translated: 7.65; Mature: 7.65
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYEASLIEKKWQKIWDENEYFEPKDDLNLPKKYILSMFPYPSGRIHMGHVRNYTIGDAL CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEECCCCCCCHHHHH ARYYRKIGFNVLHPIGFDSFGMPAENAAIKHKIHPKSWTYENIAYMKKELFSLGFSFSKK HHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCC RMLATSDPLYTKFEQEIFIKMFEKGLIYTKEANVNWCEQDQTVLANEQVEDGKCWRCGHE CEEECCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEECCCCCCCCCCHHHHHHH VVQKKMPGYYVKITAYAEKLLKDLEGLRDKWPNQVLTMQENWIGKSEGLAFSLNLDEKSK HHHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEHHHCCCCCCCEEEEECCCHHHH QKAKESSLEVFTTRADTIYGVSYVALAPEHKIVQNLLLQNLLNQDVLNKIKAIQNQSPRE HHHHHCCCEEEEECCCCEECCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH RQSSEKEGYFLGIYAIHPLSGEKIPLWVANFVLSDYGSGAVMAVPAHDERDFEFAKKYNL HHCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHH AIKQVIQTQENLPYTQKLGKLIHSQEFDNLDCNEARLKIISQFEAKNIGKRVVNFKIRDW HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECC GVSRQRYWGAPIPMIKCQSCGIAPQKLENLPITLPEDVQITGEGNPLDKHPTWKNCICPK CCCCHHCCCCCCCCEEECCCCCCHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCC CGKEAQKESDTLDTFFESSWYFARFASDEKTWQEKALDEKSVKYWMSVDQYIGGIEHAIL CCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH HLLYARFFQKALRDLGYLTQNEPFDRLLTQGMVLKDGAKMSKSKGNVVDPDEIIEKYGAD HHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEECCCHHCCCCCCCCCHHHHHHHHCCC TARLFMLFAAPPAKELEWNDDAVEGAYRFICKLYDRAQNIKKGELVELKQENLNKEEKYA HHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHH RLKVYEALKKSEEVYHQSFAFNTLIAACMEALNALALCKNEALEQEAFYIILNILEPIIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HVCFELSEELFKCKNFKKLELKEEVFVKDTLNLAVSINGKKRAEFKISSSASKEEILAFA HHHHHHHHHHHHHCCCCCCCHHHHHHHEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHH KENTAKWLEGKSIVKEIYVEGKLVNLVIK HHCHHHHHHHHHHHHHHHHCCEEEEEEEC >Mature Secondary Structure AYEASLIEKKWQKIWDENEYFEPKDDLNLPKKYILSMFPYPSGRIHMGHVRNYTIGDAL CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEECCCCCCCHHHHH ARYYRKIGFNVLHPIGFDSFGMPAENAAIKHKIHPKSWTYENIAYMKKELFSLGFSFSKK HHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCC RMLATSDPLYTKFEQEIFIKMFEKGLIYTKEANVNWCEQDQTVLANEQVEDGKCWRCGHE CEEECCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEECCCCCCCCCCHHHHHHH VVQKKMPGYYVKITAYAEKLLKDLEGLRDKWPNQVLTMQENWIGKSEGLAFSLNLDEKSK HHHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEHHHCCCCCCCEEEEECCCHHHH QKAKESSLEVFTTRADTIYGVSYVALAPEHKIVQNLLLQNLLNQDVLNKIKAIQNQSPRE HHHHHCCCEEEEECCCCEECCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH RQSSEKEGYFLGIYAIHPLSGEKIPLWVANFVLSDYGSGAVMAVPAHDERDFEFAKKYNL HHCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHH AIKQVIQTQENLPYTQKLGKLIHSQEFDNLDCNEARLKIISQFEAKNIGKRVVNFKIRDW HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECC GVSRQRYWGAPIPMIKCQSCGIAPQKLENLPITLPEDVQITGEGNPLDKHPTWKNCICPK CCCCHHCCCCCCCCEEECCCCCCHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCC CGKEAQKESDTLDTFFESSWYFARFASDEKTWQEKALDEKSVKYWMSVDQYIGGIEHAIL CCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH HLLYARFFQKALRDLGYLTQNEPFDRLLTQGMVLKDGAKMSKSKGNVVDPDEIIEKYGAD HHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEECCCHHCCCCCCCCCHHHHHHHHCCC TARLFMLFAAPPAKELEWNDDAVEGAYRFICKLYDRAQNIKKGELVELKQENLNKEEKYA HHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHH RLKVYEALKKSEEVYHQSFAFNTLIAACMEALNALALCKNEALEQEAFYIILNILEPIIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HVCFELSEELFKCKNFKKLELKEEVFVKDTLNLAVSINGKKRAEFKISSSASKEEILAFA HHHHHHHHHHHHHCCCCCCCHHHHHHHEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHH KENTAKWLEGKSIVKEIYVEGKLVNLVIK HHCHHHHHHHHHHHHHHHHCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA