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The map label for this gene is secF [H]

Identifier: 153951817

GI number: 153951817

Start: 572405

End: 573376

Strand: Direct

Name: secF [H]

Synonym: JJD26997_0631

Alternate gene names: 153951817

Gene position: 572405-573376 (Clockwise)

Preceding gene: 153951508

Following gene: 153951097

Centisome position: 31.02

GC content: 32.3

Gene sequence:

>972_bases
ATGCAGTTTTTTAGCGAAAAGAAAATTTATAATTTTATGAGAATGCGTTTTGCTGCTATTTCTCTTTCTTTTATCTTGTT
TTTTGGTTCTATTTATTTACTTTGGGATAGGGGTTTGCAGTATGGTATAGATTTTAGCGGAGGAACTTTAGTTCAGCTTA
AATATGAAAATGCAGCTCCTATAACACAAATTCGAGAAATTTTGGAAAAACAAGGAACTTTTCAAAATTTATCTGTAACT
GAATTTGGAAGCAATGAAGAAGTAACCATACGCTTTTTAGGAAGCAATGATAATGTAAGCAATGATATAGGCGAGCATAT
AAGCACTCTTTTAAAGGATACAGGAAAATTTGAAGTGCGTCGTGCTGATGTGGTAGGTCCAAAAGTAGGTGATGAACTTA
GAAATAAAGGACTTATGGCTATAGCTGTATCTTTGATAGCAATTTTAATTTATATAGCGTTGCGTTTTGAATGGCGTTTT
GCTCTTGCGGCTATAATCAGTGAAATTCATGATGTTGTGATTACTTTAGGGGCAATTTCTTTATTTAAAATTGATGTCAA
TCTAGATACTTTGGCTGCTGTTTTAACTGTGCTTGGGTACTCTTTGAATGATACAATTATTATTTTTGATAGAATCAGAG
AAGGTATTAAAACAAGTAAAAAAACCGAACTTGCACCTATTATCAATGAAAGTGTTTCAGCAACTTTGTCAAGAACGGTT
TTAACTTCAGGGTTAACTTTAGCAACTGTTGTGATACTTTATTTCTTTGGCGGGGAAATGATACAAGGATTTTCTTTGGC
TTTGATTGTAGGTATTATAGCGGGAACTTTAAGTTCTATTTTTGTTGCAAGTCCGATATTATTATGGTTTAAATTTAGTG
TGCTTGAGTTTAGAAATAAAGAAATTGAAAAAGCAAAAAGAAAACAAGATCAAGAACGCAATCGTGCAATGTATGAAAAA
GGAACAGTGTAA

Upstream 100 bases:

>100_bases
TTACAGCTATTTTAGGGACACATGGAATGTTTGATTATTTTATGCAACGCATAGAAAAAAGTAATAATACAAGATTTTGG
TTTGGCTATAGGAGAAGATA

Downstream 100 bases:

>100_bases
GGAGAATTTATGGCTTATGAAGCAAGTTTAATAGAAAAAAAATGGCAAAAAATTTGGGATGAAAATGAATATTTTGAGCC
AAAAGATGATTTAAATTTGC

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MQFFSEKKIYNFMRMRFAAISLSFILFFGSIYLLWDRGLQYGIDFSGGTLVQLKYENAAPITQIREILEKQGTFQNLSVT
EFGSNEEVTIRFLGSNDNVSNDIGEHISTLLKDTGKFEVRRADVVGPKVGDELRNKGLMAIAVSLIAILIYIALRFEWRF
ALAAIISEIHDVVITLGAISLFKIDVNLDTLAAVLTVLGYSLNDTIIIFDRIREGIKTSKKTELAPIINESVSATLSRTV
LTSGLTLATVVILYFFGGEMIQGFSLALIVGIIAGTLSSIFVASPILLWFKFSVLEFRNKEIEKAKRKQDQERNRAMYEK
GTV

Sequences:

>Translated_323_residues
MQFFSEKKIYNFMRMRFAAISLSFILFFGSIYLLWDRGLQYGIDFSGGTLVQLKYENAAPITQIREILEKQGTFQNLSVT
EFGSNEEVTIRFLGSNDNVSNDIGEHISTLLKDTGKFEVRRADVVGPKVGDELRNKGLMAIAVSLIAILIYIALRFEWRF
ALAAIISEIHDVVITLGAISLFKIDVNLDTLAAVLTVLGYSLNDTIIIFDRIREGIKTSKKTELAPIINESVSATLSRTV
LTSGLTLATVVILYFFGGEMIQGFSLALIVGIIAGTLSSIFVASPILLWFKFSVLEFRNKEIEKAKRKQDQERNRAMYEK
GTV
>Mature_323_residues
MQFFSEKKIYNFMRMRFAAISLSFILFFGSIYLLWDRGLQYGIDFSGGTLVQLKYENAAPITQIREILEKQGTFQNLSVT
EFGSNEEVTIRFLGSNDNVSNDIGEHISTLLKDTGKFEVRRADVVGPKVGDELRNKGLMAIAVSLIAILIYIALRFEWRF
ALAAIISEIHDVVITLGAISLFKIDVNLDTLAAVLTVLGYSLNDTIIIFDRIREGIKTSKKTELAPIINESVSATLSRTV
LTSGLTLATVVILYFFGGEMIQGFSLALIVGIIAGTLSSIFVASPILLWFKFSVLEFRNKEIEKAKRKQDQERNRAMYEK
GTV

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=311, Percent_Identity=36.3344051446945, Blast_Score=225, Evalue=4e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 36138; Mature: 36138

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFFSEKKIYNFMRMRFAAISLSFILFFGSIYLLWDRGLQYGIDFSGGTLVQLKYENAAP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCEEEEEEECCCCC
ITQIREILEKQGTFQNLSVTEFGSNEEVTIRFLGSNDNVSNDIGEHISTLLKDTGKFEVR
HHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEE
RADVVGPKVGDELRNKGLMAIAVSLIAILIYIALRFEWRFALAAIISEIHDVVITLGAIS
ECCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
LFKIDVNLDTLAAVLTVLGYSLNDTIIIFDRIREGIKTSKKTELAPIINESVSATLSRTV
EEEEECCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
LTSGLTLATVVILYFFGGEMIQGFSLALIVGIIAGTLSSIFVASPILLWFKFSVLEFRNK
HHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIEKAKRKQDQERNRAMYEKGTV
HHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQFFSEKKIYNFMRMRFAAISLSFILFFGSIYLLWDRGLQYGIDFSGGTLVQLKYENAAP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCEEEEEEECCCCC
ITQIREILEKQGTFQNLSVTEFGSNEEVTIRFLGSNDNVSNDIGEHISTLLKDTGKFEVR
HHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEE
RADVVGPKVGDELRNKGLMAIAVSLIAILIYIALRFEWRFALAAIISEIHDVVITLGAIS
ECCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
LFKIDVNLDTLAAVLTVLGYSLNDTIIIFDRIREGIKTSKKTELAPIINESVSATLSRTV
EEEEECCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
LTSGLTLATVVILYFFGGEMIQGFSLALIVGIIAGTLSSIFVASPILLWFKFSVLEFRNK
HHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIEKAKRKQDQERNRAMYEKGTV
HHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]