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The map label for this gene is yebC [C]

Identifier: 153950953

GI number: 153950953

Start: 503244

End: 503951

Strand: Direct

Name: yebC [C]

Synonym: JJD26997_0557

Alternate gene names: 153950953

Gene position: 503244-503951 (Clockwise)

Preceding gene: 153952342

Following gene: 153950978

Centisome position: 27.27

GC content: 36.44

Gene sequence:

>708_bases
ATGGGACGAGCGTTTGAATACCGAAGAGCTTCTAAAGAGGCTAGATGGGATAAAATGAGTAAGCTTTTTCCTAAGCTTGC
TAAAGCCATACAAGTAGCTGCTAAAGAAGGTGGCATAGATCCTGATATGAATCCAAAATTAAGAAGTGCTATAGCCACAG
CTAAAGCAAATAATATGCCAAAAGACAATATAGATGCGGCTATTAAGCGTGCGAGTGGAAAAGATAGCGCAGATATTAAA
AACATTCATTATGAAGGAAAAGCTGCGCATGGAGCTTTGGTTATAGTTGAATGTATGAGCGATAACCCTACGCGTACCGT
GGCTAATGTAAAAGCTATTTTCAGCAAAAATGGCGGAGAAGTTTTGCAAAATGGATCTTTAGGCTTTATGTTTACTAGAA
AAGCGGTTTTTCATCTTGAAAAATTTGCAGGAGATTTAGAAGAATTAGAACTTGATTTGATCGATGCAGGGTTTGAAGAA
TTAGAACAAAATGAAGAAGAGTTAGTAATTAGCGGTGATTATACTGCCTTTGGTGAGCTAAGTTCTGCTATAGAAGCTAA
GGGTTTAGTTCTTAAAAAAGCAGGGCTTGAGTATATACCAAACAATCCTGTAAGCTTTAGCAAGGAACAGCTTAGCGATA
TAGAAAAACTTTTAGATAAGTTAGAAGATGATGATGACGTTCAAGCTGTTTATACAAATATAGATTAA

Upstream 100 bases:

>100_bases
TCCCAAAAATAAATGGTAAAATCATACCATTTAAAGCTTTAATTAGCCTTTTTAGTTTATACTTTTAAGTTTAAAAATCT
TTAAAGAAAGTGAGAATTTT

Downstream 100 bases:

>100_bases
GGAGACATAATGATAAAAACAATCGATACAAGCAAGGTAAACGAATACAAATTTGCTCTTATAAAAACTGAAAAAGGTAT
AATGAAACTAAAACTTTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MGRAFEYRRASKEARWDKMSKLFPKLAKAIQVAAKEGGIDPDMNPKLRSAIATAKANNMPKDNIDAAIKRASGKDSADIK
NIHYEGKAAHGALVIVECMSDNPTRTVANVKAIFSKNGGEVLQNGSLGFMFTRKAVFHLEKFAGDLEELELDLIDAGFEE
LEQNEEELVISGDYTAFGELSSAIEAKGLVLKKAGLEYIPNNPVSFSKEQLSDIEKLLDKLEDDDDVQAVYTNID

Sequences:

>Translated_235_residues
MGRAFEYRRASKEARWDKMSKLFPKLAKAIQVAAKEGGIDPDMNPKLRSAIATAKANNMPKDNIDAAIKRASGKDSADIK
NIHYEGKAAHGALVIVECMSDNPTRTVANVKAIFSKNGGEVLQNGSLGFMFTRKAVFHLEKFAGDLEELELDLIDAGFEE
LEQNEEELVISGDYTAFGELSSAIEAKGLVLKKAGLEYIPNNPVSFSKEQLSDIEKLLDKLEDDDDVQAVYTNID
>Mature_234_residues
GRAFEYRRASKEARWDKMSKLFPKLAKAIQVAAKEGGIDPDMNPKLRSAIATAKANNMPKDNIDAAIKRASGKDSADIKN
IHYEGKAAHGALVIVECMSDNPTRTVANVKAIFSKNGGEVLQNGSLGFMFTRKAVFHLEKFAGDLEELELDLIDAGFEEL
EQNEEELVISGDYTAFGELSSAIEAKGLVLKKAGLEYIPNNPVSFSKEQLSDIEKLLDKLEDDDDVQAVYTNID

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family [H]

Homologues:

Organism=Homo sapiens, GI27545315, Length=226, Percent_Identity=29.646017699115, Blast_Score=99, Evalue=2e-21,
Organism=Escherichia coli, GI1788171, Length=231, Percent_Identity=38.0952380952381, Blast_Score=150, Evalue=9e-38,
Organism=Escherichia coli, GI1788294, Length=240, Percent_Identity=35.4166666666667, Blast_Score=126, Evalue=1e-30,
Organism=Saccharomyces cerevisiae, GI6321458, Length=246, Percent_Identity=28.8617886178862, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002876
- InterPro:   IPR017856 [H]

Pfam domain/function: PF01709 DUF28 [H]

EC number: NA

Molecular weight: Translated: 25814; Mature: 25683

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRAFEYRRASKEARWDKMSKLFPKLAKAIQVAAKEGGIDPDMNPKLRSAIATAKANNMP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC
KDNIDAAIKRASGKDSADIKNIHYEGKAAHGALVIVECMSDNPTRTVANVKAIFSKNGGE
CCHHHHHHHHCCCCCCCCHHHEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCH
VLQNGSLGFMFTRKAVFHLEKFAGDLEELELDLIDAGFEELEQNEEELVISGDYTAFGEL
HHCCCCEEEHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHCCCCCEEEEECCCHHHHHH
SSAIEAKGLVLKKAGLEYIPNNPVSFSKEQLSDIEKLLDKLEDDDDVQAVYTNID
HHHHHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCC
>Mature Secondary Structure 
GRAFEYRRASKEARWDKMSKLFPKLAKAIQVAAKEGGIDPDMNPKLRSAIATAKANNMP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC
KDNIDAAIKRASGKDSADIKNIHYEGKAAHGALVIVECMSDNPTRTVANVKAIFSKNGGE
CCHHHHHHHHCCCCCCCCHHHEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCH
VLQNGSLGFMFTRKAVFHLEKFAGDLEELELDLIDAGFEELEQNEEELVISGDYTAFGEL
HHCCCCEEEHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHCCCCCEEEEECCCHHHHHH
SSAIEAKGLVLKKAGLEYIPNNPVSFSKEQLSDIEKLLDKLEDDDDVQAVYTNID
HHHHHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA