| Definition | Yersinia pseudotuberculosis IP 31758 plasmid_59kb, complete sequence. |
|---|---|
| Accession | NC_009704 |
| Length | 58,679 |
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The map label for this gene is 153930603
Identifier: 153930603
GI number: 153930603
Start: 36756
End: 37538
Strand: Reverse
Name: 153930603
Synonym: YpsIP31758_A0017
Alternate gene names: NA
Gene position: 37538-36756 (Counterclockwise)
Preceding gene: 153930610
Following gene: 153930614
Centisome position: 63.97
GC content: 36.91
Gene sequence:
>783_bases ATGAGCAGTACCAAGCAATGGTTTGAGGATGAAGAGGAAAACCGCCGTGAAGCGTGGATACGTGCAAGATTATCTGATCC TGACCTGGGAAATGATTCAGACGAGTGGCAGGAGCTAGAGGAAGAGTATGATAATTATAAGGATTTTATGGAGGACATGG CTCGCGAGGAATATGAAGAGCAGCAATGGCTGAAAAATAATCCCCACACTGATATTTATGTATCCTCGATATCCTTACTG GATGAAATTCTTGACGAAGGGAAAGAGCATACCAGTGAAACTTTTTATAAAATGCAAATAGCTTATTGCGTCACCATCAT GGAAAGCTGCCTGGGCGACATGATTAAAAGCATTGTCTTATCAGATAACCGATACAGAAATTATGCTGTTTATCAGATTG AACATTTACGCAAAAAAGAAATAAATCTGGTTTATTTAATTGATAAAGAGGATGTCGTTGGTAAATCGGTGCAGGAGTAT TTAACAGGGATTACATATCATGACATCCCCATTGTGGAAAGAACGTATAGAGCAATACTCCAAATAAAAAAATACAAAAA TATTGATACGACTAAAATTGATGTACTGACAACATTAAGAAACGACATTGTTCATCGAAACGGAAAGACCCGCGAGGGAA ATGATTCAATAAAATTTGATTATAACGCTGTTCTTGAAGCATTTGATACAACAAAAATATTTTTGACCGAGATGAAAGAC ATGATCAGCGAGGCGATAAAATATCATGAGGAAAAGCAGATGAATAAGGATTTGGAAAACTAA
Upstream 100 bases:
>100_bases ATGTGTGAAACATCGGCGGTTATGATAGAGAACTATAAGCTGTTTATTAAAACTATTAAAGAAAACGACTTTATAACAGA CACAATATAAGGAGCACTAA
Downstream 100 bases:
>100_bases AATTTCCAACCCCCAAATAAACTCTCTTTGGGGAGAGGGTTAGCGAATTGGAGAAGTAAAAAAAGTGTTCAATACTAAAA ATAAAATATTAAAAAGCACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MSSTKQWFEDEEENRREAWIRARLSDPDLGNDSDEWQELEEEYDNYKDFMEDMAREEYEEQQWLKNNPHTDIYVSSISLL DEILDEGKEHTSETFYKMQIAYCVTIMESCLGDMIKSIVLSDNRYRNYAVYQIEHLRKKEINLVYLIDKEDVVGKSVQEY LTGITYHDIPIVERTYRAILQIKKYKNIDTTKIDVLTTLRNDIVHRNGKTREGNDSIKFDYNAVLEAFDTTKIFLTEMKD MISEAIKYHEEKQMNKDLEN
Sequences:
>Translated_260_residues MSSTKQWFEDEEENRREAWIRARLSDPDLGNDSDEWQELEEEYDNYKDFMEDMAREEYEEQQWLKNNPHTDIYVSSISLL DEILDEGKEHTSETFYKMQIAYCVTIMESCLGDMIKSIVLSDNRYRNYAVYQIEHLRKKEINLVYLIDKEDVVGKSVQEY LTGITYHDIPIVERTYRAILQIKKYKNIDTTKIDVLTTLRNDIVHRNGKTREGNDSIKFDYNAVLEAFDTTKIFLTEMKD MISEAIKYHEEKQMNKDLEN >Mature_259_residues SSTKQWFEDEEENRREAWIRARLSDPDLGNDSDEWQELEEEYDNYKDFMEDMAREEYEEQQWLKNNPHTDIYVSSISLLD EILDEGKEHTSETFYKMQIAYCVTIMESCLGDMIKSIVLSDNRYRNYAVYQIEHLRKKEINLVYLIDKEDVVGKSVQEYL TGITYHDIPIVERTYRAILQIKKYKNIDTTKIDVLTTLRNDIVHRNGKTREGNDSIKFDYNAVLEAFDTTKIFLTEMKDM ISEAIKYHEEKQMNKDLEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31057; Mature: 30926
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSTKQWFEDEEENRREAWIRARLSDPDLGNDSDEWQELEEEYDNYKDFMEDMAREEYEE CCCCHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QQWLKNNPHTDIYVSSISLLDEILDEGKEHTSETFYKMQIAYCVTIMESCLGDMIKSIVL HHHHCCCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SDNRYRNYAVYQIEHLRKKEINLVYLIDKEDVVGKSVQEYLTGITYHDIPIVERTYRAIL CCCCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH QIKKYKNIDTTKIDVLTTLRNDIVHRNGKTREGNDSIKFDYNAVLEAFDTTKIFLTEMKD HHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHH MISEAIKYHEEKQMNKDLEN HHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SSTKQWFEDEEENRREAWIRARLSDPDLGNDSDEWQELEEEYDNYKDFMEDMAREEYEE CCCHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QQWLKNNPHTDIYVSSISLLDEILDEGKEHTSETFYKMQIAYCVTIMESCLGDMIKSIVL HHHHCCCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SDNRYRNYAVYQIEHLRKKEINLVYLIDKEDVVGKSVQEYLTGITYHDIPIVERTYRAIL CCCCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH QIKKYKNIDTTKIDVLTTLRNDIVHRNGKTREGNDSIKFDYNAVLEAFDTTKIFLTEMKD HHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHH MISEAIKYHEEKQMNKDLEN HHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA