| Definition | Yersinia pseudotuberculosis IP 31758 plasmid_59kb, complete sequence. |
|---|---|
| Accession | NC_009704 |
| Length | 58,679 |
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The map label for this gene is 153930610
Identifier: 153930610
GI number: 153930610
Start: 37549
End: 38265
Strand: Reverse
Name: 153930610
Synonym: YpsIP31758_A0018
Alternate gene names: NA
Gene position: 38265-37549 (Counterclockwise)
Preceding gene: 153930580
Following gene: 153930603
Centisome position: 65.21
GC content: 36.68
Gene sequence:
>717_bases ATGACAGGCATCTTTATTTCGTCGGGAATGACTATGCTTCACTGGCTGAACACACACATCGGGACTGATTGGGCGACCTA TCAGGGATGGGGTATTTCTATTATTGGATTGGGTATTTCTGTTATAGGGATAATAGGTGCGCCCAAAATAATCAAAAAAT ATAAACTCAGGCAAACAAATAAAAATAACAATGGCAATATCAATCAGGCCGGTCGTGACCTGAACATCACTACGATCAAT CATATTTCCCATGCAAAAACAGAATCGGGTATTGAAGAAAAAAAGAAAGCGCATGATTTAAATATCATTGAAGAAATACT TACGCTCCTGCCTTATGAAGCCACCCTTAATGAAGCCGAGCAAAGTTCTATTGTCGGCATGACATATCAATTTGCCCGTA ATTTAGATGAGGCAGGAAAATACAGGGATGAAAATTATAGGTTATATAATTACGCTGTTAATGAAGTGAAAGATAACTTT ATTATCGCAATCACTGCTTTCTATAACAGTCTTACACCATTTTTGACGGTAGACCATCCAGAAAGAGAACCCTTAAGACT TGACCTGCCTTATGACTGGAGAAATAACCCTAAAAGTGAAAAGACATATAGAAAGTACCAGAGTGAAATGTGTGAAACAT CGGCGGTTATGATAGAGAACTATAAGCTGTTTATTAAAACTATTAAAGAAAACGACTTTATAACAGACACAATATAA
Upstream 100 bases:
>100_bases GCGGGAGTAGGGGACTCGTCCGAGTTTGGCAGTCTCCGCGTAAAGCCAAGTCATGCGGCAGCGGTGACACACCGAGTCGC AACGCCGCCTTTCTGCTATC
Downstream 100 bases:
>100_bases GGAGCACTAAATGAGCAGTACCAAGCAATGGTTTGAGGATGAAGAGGAAAACCGCCGTGAAGCGTGGATACGTGCAAGAT TATCTGATCCTGACCTGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MTGIFISSGMTMLHWLNTHIGTDWATYQGWGISIIGLGISVIGIIGAPKIIKKYKLRQTNKNNNGNINQAGRDLNITTIN HISHAKTESGIEEKKKAHDLNIIEEILTLLPYEATLNEAEQSSIVGMTYQFARNLDEAGKYRDENYRLYNYAVNEVKDNF IIAITAFYNSLTPFLTVDHPEREPLRLDLPYDWRNNPKSEKTYRKYQSEMCETSAVMIENYKLFIKTIKENDFITDTI
Sequences:
>Translated_238_residues MTGIFISSGMTMLHWLNTHIGTDWATYQGWGISIIGLGISVIGIIGAPKIIKKYKLRQTNKNNNGNINQAGRDLNITTIN HISHAKTESGIEEKKKAHDLNIIEEILTLLPYEATLNEAEQSSIVGMTYQFARNLDEAGKYRDENYRLYNYAVNEVKDNF IIAITAFYNSLTPFLTVDHPEREPLRLDLPYDWRNNPKSEKTYRKYQSEMCETSAVMIENYKLFIKTIKENDFITDTI >Mature_237_residues TGIFISSGMTMLHWLNTHIGTDWATYQGWGISIIGLGISVIGIIGAPKIIKKYKLRQTNKNNNGNINQAGRDLNITTINH ISHAKTESGIEEKKKAHDLNIIEEILTLLPYEATLNEAEQSSIVGMTYQFARNLDEAGKYRDENYRLYNYAVNEVKDNFI IAITAFYNSLTPFLTVDHPEREPLRLDLPYDWRNNPKSEKTYRKYQSEMCETSAVMIENYKLFIKTIKENDFITDTI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27350; Mature: 27219
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGIFISSGMTMLHWLNTHIGTDWATYQGWGISIIGLGISVIGIIGAPKIIKKYKLRQTN CCEEEECCCHHHHHHHHHHCCCCCCEECCCCEEEEEHHHHHHHHHCCHHHHHHHHHHCCC KNNNGNINQAGRDLNITTINHISHAKTESGIEEKKKAHDLNIIEEILTLLPYEATLNEAE CCCCCCCCCCCCEEEEEEECCHHHHHHHCCHHHHHHHCCHHHHHHHHHHCCCHHHHCHHH QSSIVGMTYQFARNLDEAGKYRDENYRLYNYAVNEVKDNFIIAITAFYNSLTPFLTVDHP HHHEHHHHHHHHHCHHHHHCCCCCCEEEEEEEHHHCCCCEEEEEEEHHHCCCCEEEECCC EREPLRLDLPYDWRNNPKSEKTYRKYQSEMCETSAVMIENYKLFIKTIKENDFITDTI CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEECCC >Mature Secondary Structure TGIFISSGMTMLHWLNTHIGTDWATYQGWGISIIGLGISVIGIIGAPKIIKKYKLRQTN CEEEECCCHHHHHHHHHHCCCCCCEECCCCEEEEEHHHHHHHHHCCHHHHHHHHHHCCC KNNNGNINQAGRDLNITTINHISHAKTESGIEEKKKAHDLNIIEEILTLLPYEATLNEAE CCCCCCCCCCCCEEEEEEECCHHHHHHHCCHHHHHHHCCHHHHHHHHHHCCCHHHHCHHH QSSIVGMTYQFARNLDEAGKYRDENYRLYNYAVNEVKDNFIIAITAFYNSLTPFLTVDHP HHHEHHHHHHHHHCHHHHHCCCCCCEEEEEEEHHHCCCCEEEEEEEHHHCCCCEEEECCC EREPLRLDLPYDWRNNPKSEKTYRKYQSEMCETSAVMIENYKLFIKTIKENDFITDTI CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA