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The map label for this gene is resD [H]

Identifier: 153930591

GI number: 153930591

Start: 38579

End: 39370

Strand: Direct

Name: resD [H]

Synonym: YpsIP31758_A0019

Alternate gene names: 153930591

Gene position: 38579-39370 (Clockwise)

Preceding gene: 153930600

Following gene: 153930589

Centisome position: 65.75

GC content: 56.19

Gene sequence:

>792_bases
GTGCAAATTGCGGATAATGAAATGTCGAGCATCATCCCTCACGATTTGGGGCAGATTTCACGTAGCGCGATCCGCGCACC
GGCCCCGCTGTTTAGTTACGGTCATGCCCTGGCACTGCGTGAAAAAGTGCTGGCCTCCGGTGATGCGGAATTGCCGCTCT
ATCTGCTGGCCCCCGAAGTCACAGTGTTACTTTCCTATCTGCCTGACTTGCGGCAACGGCTGCTGATCGAAACCTTGTGG
AACACCGGCGCACGATTAAATGAAGCGCTGGCCCTGACGCCAGCCTGTTTTCACATCGAGGGCGACTCGCCGTTTGTGGT
ACTGAAGACACTGAAGCAACGGCAAAAAGGACGGGGCCGCCCGAAAGAGGGCCAGACACTGAAACGCATCGTGCCGCTGC
TCGATGAAAACTATGTGCGCCTGGTACACGAATACCTGGCTACGTTTCGGCCCAAGAAATATGCACCGCTGTGGGTGAAC
GAGCACGGCGACACCATCAGTGATGAAACCCCGCGCACCTGGTTACGTGCTGCTGTGACACGCGCAAACCGTGACAGTGT
AACGTTTAGTCTGCCGGTGATCACCCCGAAAACCTTTCGGCACTCGTTCGCCATGCATTTAGTGCAAAGCGGTGTGGCCT
TTAAAGTGGTGCAAACCTTCATGGGCCACAAGGACGCCGCCAGTACCGAAGTGTATACGCGAATATTTGCGCTGGATGTG
GGGGCGCAGTATGGGGTGAAGTTCAGTATGGCAGCGGCTGATGCAATGGCACTGGTGCGCCGTAGGTCTTGA

Upstream 100 bases:

>100_bases
TTTTCCCCCCTATAGCGAAAACTCCCAACCGTTCCGATTTTTATCGGGTATTTATTGTGATCGTACATCGACCTGAATTG
CGTCAAAATAGTCTCATTGA

Downstream 100 bases:

>100_bases
CGGAATGTTTACGCCAAGGAAAAAACTCTAAGAGGTAATGCTGGCATTTCTGCGACCGACAACGGGCATTGAGTCACCGT
AATGCTGGCAGTTGTATCTT

Product: putative integrase/resolvase

Products: NA

Alternate protein names: Protein D [H]

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MQIADNEMSSIIPHDLGQISRSAIRAPAPLFSYGHALALREKVLASGDAELPLYLLAPEVTVLLSYLPDLRQRLLIETLW
NTGARLNEALALTPACFHIEGDSPFVVLKTLKQRQKGRGRPKEGQTLKRIVPLLDENYVRLVHEYLATFRPKKYAPLWVN
EHGDTISDETPRTWLRAAVTRANRDSVTFSLPVITPKTFRHSFAMHLVQSGVAFKVVQTFMGHKDAASTEVYTRIFALDV
GAQYGVKFSMAAADAMALVRRRS

Sequences:

>Translated_263_residues
MQIADNEMSSIIPHDLGQISRSAIRAPAPLFSYGHALALREKVLASGDAELPLYLLAPEVTVLLSYLPDLRQRLLIETLW
NTGARLNEALALTPACFHIEGDSPFVVLKTLKQRQKGRGRPKEGQTLKRIVPLLDENYVRLVHEYLATFRPKKYAPLWVN
EHGDTISDETPRTWLRAAVTRANRDSVTFSLPVITPKTFRHSFAMHLVQSGVAFKVVQTFMGHKDAASTEVYTRIFALDV
GAQYGVKFSMAAADAMALVRRRS
>Mature_263_residues
MQIADNEMSSIIPHDLGQISRSAIRAPAPLFSYGHALALREKVLASGDAELPLYLLAPEVTVLLSYLPDLRQRLLIETLW
NTGARLNEALALTPACFHIEGDSPFVVLKTLKQRQKGRGRPKEGQTLKRIVPLLDENYVRLVHEYLATFRPKKYAPLWVN
EHGDTISDETPRTWLRAAVTRANRDSVTFSLPVITPKTFRHSFAMHLVQSGVAFKVVQTFMGHKDAASTEVYTRIFALDV
GAQYGVKFSMAAADAMALVRRRS

Specific function: Acts as a repressor of transcription and as a site- specific resolvase that cleaves at the rfsF site [H]

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR016423 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 29424; Mature: 29424

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIADNEMSSIIPHDLGQISRSAIRAPAPLFSYGHALALREKVLASGDAELPLYLLAPEV
CCCCCCHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECHHH
TVLLSYLPDLRQRLLIETLWNTGARLNEALALTPACFHIEGDSPFVVLKTLKQRQKGRGR
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEECCEEEEECCCCCCHHHHHHHHHHHCCCC
PKEGQTLKRIVPLLDENYVRLVHEYLATFRPKKYAPLWVNEHGDTISDETPRTWLRAAVT
CCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHH
RANRDSVTFSLPVITPKTFRHSFAMHLVQSGVAFKVVQTFMGHKDAASTEVYTRIFALDV
HCCCCCEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHEEC
GAQYGVKFSMAAADAMALVRRRS
CCHHCCEEHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQIADNEMSSIIPHDLGQISRSAIRAPAPLFSYGHALALREKVLASGDAELPLYLLAPEV
CCCCCCHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECHHH
TVLLSYLPDLRQRLLIETLWNTGARLNEALALTPACFHIEGDSPFVVLKTLKQRQKGRGR
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEECCEEEEECCCCCCHHHHHHHHHHHCCCC
PKEGQTLKRIVPLLDENYVRLVHEYLATFRPKKYAPLWVNEHGDTISDETPRTWLRAAVT
CCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHH
RANRDSVTFSLPVITPKTFRHSFAMHLVQSGVAFKVVQTFMGHKDAASTEVYTRIFALDV
HCCCCCEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHEEC
GAQYGVKFSMAAADAMALVRRRS
CCHHCCEEHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3027661; 3007930; 6327993 [H]