Definition Yersinia pseudotuberculosis IP 31758 plasmid_59kb, complete sequence.
Accession NC_009704
Length 58,679

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The map label for this gene is 153930600

Identifier: 153930600

GI number: 153930600

Start: 35377

End: 35859

Strand: Direct

Name: 153930600

Synonym: YpsIP31758_A0015

Alternate gene names: NA

Gene position: 35377-35859 (Clockwise)

Preceding gene: 153930565

Following gene: 153930591

Centisome position: 60.29

GC content: 39.75

Gene sequence:

>483_bases
ATGGCTTGCCGGATATATCAGAGAGGACTGATGAAAAGAAAATACGTTAATTTGAAAAATATATTATTATTTGGTGCCGT
TCTTTCCTCGATTTTTTGCTTGAGCGCATATGCCAAGGATCTCAACTGTATTACACGCGCAGAGGCTGATTATGATGTAC
CTGCGGGGCTATTGAATGTCATGGCGGCTTATGAAGCGAAAAGAAATCAGCCTGTTGCCAATAAGTTATATGGCCCTATG
CAGCTGCACTCTGTTGTAATACCTATGGCGGCGGAAGGTATTCATTCTACGGAACATGAGATTAAATATAATGACTGCCA
AAATTACCGCGCTGCCGCATGGTTATTAATGAATAGTTTTGGCGGCAATCTATATAGCGATATTTTTAACGCCGTTAATA
ATTATTACTACGGTTTTGGTAAACAGAGTTATGGAGTGATCACCTTAAAGATAAAGGATATGTACCAGCACGAAAAACGG
TAG

Upstream 100 bases:

>100_bases
CTTTTATGAGGGCAACATGCTTAAAGTTTTGGATAGTCAGTCAGGGAAAAAACATGACTAAGTATGTCTTCGAATAAAAA
GTATCAAGACGACGCTGTTA

Downstream 100 bases:

>100_bases
CCCGAACAAACCGTGCTGGCGTTCGCCTGCTACTCACCTCTCCGGCCCCGCGCCTTTCTCTCCCGCTGGCCGGATTGGGG
TTTACCCTCAGAGTACCAAA

Product: type IV pilus biogenesis protein PilT

Products: NA

Alternate protein names: Conjugal Transfer Protein

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MACRIYQRGLMKRKYVNLKNILLFGAVLSSIFCLSAYAKDLNCITRAEADYDVPAGLLNVMAAYEAKRNQPVANKLYGPM
QLHSVVIPMAAEGIHSTEHEIKYNDCQNYRAAAWLLMNSFGGNLYSDIFNAVNNYYYGFGKQSYGVITLKIKDMYQHEKR

Sequences:

>Translated_160_residues
MACRIYQRGLMKRKYVNLKNILLFGAVLSSIFCLSAYAKDLNCITRAEADYDVPAGLLNVMAAYEAKRNQPVANKLYGPM
QLHSVVIPMAAEGIHSTEHEIKYNDCQNYRAAAWLLMNSFGGNLYSDIFNAVNNYYYGFGKQSYGVITLKIKDMYQHEKR
>Mature_159_residues
ACRIYQRGLMKRKYVNLKNILLFGAVLSSIFCLSAYAKDLNCITRAEADYDVPAGLLNVMAAYEAKRNQPVANKLYGPMQ
LHSVVIPMAAEGIHSTEHEIKYNDCQNYRAAAWLLMNSFGGNLYSDIFNAVNNYYYGFGKQSYGVITLKIKDMYQHEKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18213; Mature: 18082

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MACRIYQRGLMKRKYVNLKNILLFGAVLSSIFCLSAYAKDLNCITRAEADYDVPAGLLNV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
MAAYEAKRNQPVANKLYGPMQLHSVVIPMAAEGIHSTEHEIKYNDCQNYRAAAWLLMNSF
HHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHC
GGNLYSDIFNAVNNYYYGFGKQSYGVITLKIKDMYQHEKR
CCHHHHHHHHHHHHHEECCCCCCCCEEEEEEHHHHHCCCC
>Mature Secondary Structure 
ACRIYQRGLMKRKYVNLKNILLFGAVLSSIFCLSAYAKDLNCITRAEADYDVPAGLLNV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
MAAYEAKRNQPVANKLYGPMQLHSVVIPMAAEGIHSTEHEIKYNDCQNYRAAAWLLMNSF
HHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHC
GGNLYSDIFNAVNNYYYGFGKQSYGVITLKIKDMYQHEKR
CCHHHHHHHHHHHHHEECCCCCCCCEEEEEEHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA