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The map label for this gene is spoIID [H]

Identifier: 153937283

GI number: 153937283

Start: 187335

End: 188411

Strand: Direct

Name: spoIID [H]

Synonym: CLC_0208

Alternate gene names: 153937283

Gene position: 187335-188411 (Clockwise)

Preceding gene: 153935043

Following gene: 153936256

Centisome position: 4.98

GC content: 26.65

Gene sequence:

>1077_bases
ATGAGAAGATTAAATAGGTATACTAATATTAATAAGTTAGTTATAACAATTATAAGTACTGTGTGTATTATGTTAATTTT
AAGTTTTGCTTTATCCTTTAGTGAAAACAAAGAACAAAAAGTTAAGGAAACTATAAGTAAGGTTAAGTTAGATCAGAAAA
GACAAGAAGAAAAGATTGATATAAATAAAAAATATAAAGTAAAATCAGAACCACAAGTTAGGGTTTACTTTGTTAATGAA
AAAGTGGTAAAATCAATACCCTTAGAGGAATATGTAAAGGGCGTTGTTTCAGCTGAAATGCCAGCAGAGTTTCATATAGA
AGCATTGAAAGCTCAAGCAGTAGCGGCTAGAACTTATGCTTTAGCTCACATGAAAGGGTTCGGCGAAAATCAATATAATA
AAAGAATAAATGCAGACGTGTGTGATAGTGTTCAATCTCAAGTTTTTATGCCTAAGGATAAAAGAATAAAATCTTGGCCA
AAGGAAAAGAGAAATGAATATTGGAATAAAATAGAAGAAAGTGTTAATAGCACTAAGGGGAATGTACTTGTATATAACAA
TGAAATAGTTATGGCTCCATATTATTTTGCTACTAGTAATGGAAAAACAGAAGATAGTGAAAATGTATTTAATAGTGAAG
TTCCTTATTTAAAAAGTGTAAAAAGTCCAGGAGAAGAGAAGGCTCCTAAATTTAAGAGTAGCAAAAAAATTTCTTATGAT
CAATTTATAAAAATTATAAAAACTCAATATCCTAAGTGTACTATAAATAAAAAAGATATAAATAAAAAAATAATAATAAA
GGATAAAACAGAAAGTGGTAGTATTAAAAAAATTAAAATAGATAATATAGAAATTAAAGGTACAGAATTTAGAAAAATAT
TAGGTCTAAATTCATCTAAATTTTCATTAGAATTTAAAGATAACTATCTTATAGTAAATTGTAATGGGTATGGTCATAAT
GTTGGAATGAGTCAATGGGGGGCAAATAGTATGGGTAAATCAGGGAAAAAATATGATTATATACTTAAACATTACTATAA
AGGAGTAAATATGGAAATTCTCAAATATAGTGATTAG

Upstream 100 bases:

>100_bases
TAACAAAATTATAATTAAGTTTTAGCTTATATTTTAGCATAATAAACCTGTATGAAAAATATAATTGTATAGAAAACTTT
ATTATGAAAAGAGGGAAAAC

Downstream 100 bases:

>100_bases
TATTAATAAATTTATGGATTAACATCTATAGCTATAAGTTTTTTATATAACATAGAACTATAAACAAGTTCTTGGCTTTA
GAGGGAGTCTTTACTCCTTA

Product: stage II sporulation protein D

Products: NA

Alternate protein names: Stage II sporulation protein C [H]

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MRRLNRYTNINKLVITIISTVCIMLILSFALSFSENKEQKVKETISKVKLDQKRQEEKIDINKKYKVKSEPQVRVYFVNE
KVVKSIPLEEYVKGVVSAEMPAEFHIEALKAQAVAARTYALAHMKGFGENQYNKRINADVCDSVQSQVFMPKDKRIKSWP
KEKRNEYWNKIEESVNSTKGNVLVYNNEIVMAPYYFATSNGKTEDSENVFNSEVPYLKSVKSPGEEKAPKFKSSKKISYD
QFIKIIKTQYPKCTINKKDINKKIIIKDKTESGSIKKIKIDNIEIKGTEFRKILGLNSSKFSLEFKDNYLIVNCNGYGHN
VGMSQWGANSMGKSGKKYDYILKHYYKGVNMEILKYSD

Sequences:

>Translated_358_residues
MRRLNRYTNINKLVITIISTVCIMLILSFALSFSENKEQKVKETISKVKLDQKRQEEKIDINKKYKVKSEPQVRVYFVNE
KVVKSIPLEEYVKGVVSAEMPAEFHIEALKAQAVAARTYALAHMKGFGENQYNKRINADVCDSVQSQVFMPKDKRIKSWP
KEKRNEYWNKIEESVNSTKGNVLVYNNEIVMAPYYFATSNGKTEDSENVFNSEVPYLKSVKSPGEEKAPKFKSSKKISYD
QFIKIIKTQYPKCTINKKDINKKIIIKDKTESGSIKKIKIDNIEIKGTEFRKILGLNSSKFSLEFKDNYLIVNCNGYGHN
VGMSQWGANSMGKSGKKYDYILKHYYKGVNMEILKYSD
>Mature_358_residues
MRRLNRYTNINKLVITIISTVCIMLILSFALSFSENKEQKVKETISKVKLDQKRQEEKIDINKKYKVKSEPQVRVYFVNE
KVVKSIPLEEYVKGVVSAEMPAEFHIEALKAQAVAARTYALAHMKGFGENQYNKRINADVCDSVQSQVFMPKDKRIKSWP
KEKRNEYWNKIEESVNSTKGNVLVYNNEIVMAPYYFATSNGKTEDSENVFNSEVPYLKSVKSPGEEKAPKFKSSKKISYD
QFIKIIKTQYPKCTINKKDINKKIIIKDKTESGSIKKIKIDNIEIKGTEFRKILGLNSSKFSLEFKDNYLIVNCNGYGHN
VGMSQWGANSMGKSGKKYDYILKHYYKGVNMEILKYSD

Specific function: May act at the level of sigma-G activity or its stability. SpoIID is probably required for engulfment [H]

COG id: COG2385

COG function: function code D; Sporulation protein and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013486
- InterPro:   IPR013693
- InterPro:   IPR014225 [H]

Pfam domain/function: PF08486 SpoIID [H]

EC number: NA

Molecular weight: Translated: 41333; Mature: 41333

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLNRYTNINKLVITIISTVCIMLILSFALSFSENKEQKVKETISKVKLDQKRQEEKID
CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
INKKYKVKSEPQVRVYFVNEKVVKSIPLEEYVKGVVSAEMPAEFHIEALKAQAVAARTYA
CCCEEEECCCCCEEEEEECCHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LAHMKGFGENQYNKRINADVCDSVQSQVFMPKDKRIKSWPKEKRNEYWNKIEESVNSTKG
HHHHHCCCCCHHCCCCCHHHHHHHHHCEECCCCCHHHCCCHHHHHHHHHHHHHHHCCCCC
NVLVYNNEIVMAPYYFATSNGKTEDSENVFNSEVPYLKSVKSPGEEKAPKFKSSKKISYD
CEEEECCEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCCHHCCCCCCCCCCCCHH
QFIKIIKTQYPKCTINKKDINKKIIIKDKTESGSIKKIKIDNIEIKGTEFRKILGLNSSK
HHHHHHHHCCCCEECCHHCCCCEEEEEECCCCCCEEEEEECCEEECCHHHHHHHCCCCCE
FSLEFKDNYLIVNCNGYGHNVGMSQWGANSMGKSGKKYDYILKHYYKGVNMEILKYSD
EEEEECCCEEEEEECCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECC
>Mature Secondary Structure
MRRLNRYTNINKLVITIISTVCIMLILSFALSFSENKEQKVKETISKVKLDQKRQEEKID
CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
INKKYKVKSEPQVRVYFVNEKVVKSIPLEEYVKGVVSAEMPAEFHIEALKAQAVAARTYA
CCCEEEECCCCCEEEEEECCHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LAHMKGFGENQYNKRINADVCDSVQSQVFMPKDKRIKSWPKEKRNEYWNKIEESVNSTKG
HHHHHCCCCCHHCCCCCHHHHHHHHHCEECCCCCHHHCCCHHHHHHHHHHHHHHHCCCCC
NVLVYNNEIVMAPYYFATSNGKTEDSENVFNSEVPYLKSVKSPGEEKAPKFKSSKKISYD
CEEEECCEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCCHHCCCCCCCCCCCCHH
QFIKIIKTQYPKCTINKKDINKKIIIKDKTESGSIKKIKIDNIEIKGTEFRKILGLNSSK
HHHHHHHHCCCCEECCHHCCCCEEEEEECCCCCCEEEEEECCEEECCHHHHHHHCCCCCE
FSLEFKDNYLIVNCNGYGHNVGMSQWGANSMGKSGKKYDYILKHYYKGVNMEILKYSD
EEEEECCCEEEEEECCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3011962; 9384377 [H]