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The map label for this gene is treC [H]

Identifier: 153936849

GI number: 153936849

Start: 2053984

End: 2055651

Strand: Direct

Name: treC [H]

Synonym: CLC_1934

Alternate gene names: 153936849

Gene position: 2053984-2055651 (Clockwise)

Preceding gene: 153936138

Following gene: 153937812

Centisome position: 54.62

GC content: 28.48

Gene sequence:

>1668_bases
ATGAAAGATTTTAAAAAAAGTGTAGTCTATCAAATCTACCCAAAATCCTTTAATGATACTAATGATGATGGATTGGGAGA
TTTAAAAGGAATTACAGTTAAATTGGATTATTTAAAAACATTAGGTATAGATTATATATGGTTAACTCCTTTTTATATCT
CCCCTCAAAGGGATAATGGATATGATGTAGCGGATTATTGCAATATTGATCCTCTATTTGGTACCATGGAAGATTTTGAA
AATCTAGTTAGAGAAGCAAATAAAAGAGGAATTGATGTTATGCTTGATATGGTATTTAATCATACCTCTACAGAACATAA
ATGGTTTAAAAATGCTCTAAGCGGCGATAAAAAATATAAAAATTATTATATATTCAAAGAACCTAAAAATAAACAGCTCC
CTACTAACTGGAAATCTAAATTTGGAGGTCCCGCTTGGGAATATGTTAAAGAGCTTGATGAATATTACCTACATCTATTT
GATGCTACTCAAGCAGACCTTAACTGGGAAAATGAAGAAGTTAGAACAGAAGTTTTTGATATTGTGAATTTTTGGATAAA
AAAAGGTGTAAAAGGCTTTCGTTTTGATGTTATTAACCTAATTTCAAAACCAATGGAATATAGGGATGACAATAATGGAG
ATGGTCGTTCATTCTACACAGATGGTCCTAATATTCATAACCATATAAAGCAACTAAATAAAGAAACCTTTGGCAGATAT
AAAGATATAATTACTGTAGGTGAAATGTCCTCTACCACCATAGATAATTGCATTAAATATTCAAATCCTAAAGAAGAAGA
ATTGTCTATGGTATTTAATTTTCATCATCTAAAAGTAGATTATAAAGATGGTGATAAATGGAGCTTAATGGATTTTGATT
TTATAAAATTAAAAAGTATCTTTAATCATTGGCAGGCTGGAATGGAAGAAGGTAATGGCTGGAATGCAGTATTTTGGTGC
AACCATGACCAACCTCGTATTGTATCTCGCTTTGGAGATGATAATAAATACCATAAAGAATCTGCAAAAATGTTAGCTAC
ATCAATACATCTACTTAGGGGAACTCCTTATATTTATCAGGGAGAAGAAATCGGTATGACAAATTGTTATTATGATACAA
TTAATTCCTATAGGGATGTGGAATCAATTAATTTTTATAATATACTAAAGTCTGAAGATAAAACTGAAGAAGAAATAATT
AAAATTTTACAGGCAAAATCAAGAGATAATTCCCGCAGTCCAATGCAATGGGATAACTCAAACAATGCTGGTTTTACTAA
AGAAGAGCCGTGGATAAAAGTATGCAAAAACTATAAAGATATCAATGTAGAAAACTCCTTAAAAGATAAAGATTCAGTTT
TTTATCATTATCAAAAACTGATTAAGTTAAGAAAGGAATACGATATTATATCTTATGGAAATTTTGAATTAATACTAAAA
GAAGACAAAAGTATATTTGCTTATTTAAGAAACTACAAAAATGAAAAACTACTTGTAATAAATAATTTTTATGGAAAGGA
AATCTTATTTAAATTGCCTACAGAATTAAAATTAGGTGAATATAAAAACAAAATTTTAATTTCTAATTATAAGGATTCCC
CTATAGACTTTAGAAAAATTAATTTAAGACCTTATGAGTCTATAGTTTACCATCTTGAGAGAAAATAA

Upstream 100 bases:

>100_bases
GAGTAAAAAAATACAATAAACCAATTATATCTTAAAATAGAAAAGGAGGATTAAATTCCTTCCTTTTCTAATTCATATTT
AAACAAAAGGAGCAAATTAC

Downstream 100 bases:

>100_bases
AAAAAATGTTAAAATGTTTCTGGTGATAAGATATGGAAAGCAAATATTTGACTATTTATAATGAGATTTCAAATAAAATA
GAAAATAATAAAATTCAATC

Product: alpha,alpha-phosphotrehalase

Products: NA

Alternate protein names: Alpha,alpha-phosphotrehalase [H]

Number of amino acids: Translated: 555; Mature: 555

Protein sequence:

>555_residues
MKDFKKSVVYQIYPKSFNDTNDDGLGDLKGITVKLDYLKTLGIDYIWLTPFYISPQRDNGYDVADYCNIDPLFGTMEDFE
NLVREANKRGIDVMLDMVFNHTSTEHKWFKNALSGDKKYKNYYIFKEPKNKQLPTNWKSKFGGPAWEYVKELDEYYLHLF
DATQADLNWENEEVRTEVFDIVNFWIKKGVKGFRFDVINLISKPMEYRDDNNGDGRSFYTDGPNIHNHIKQLNKETFGRY
KDIITVGEMSSTTIDNCIKYSNPKEEELSMVFNFHHLKVDYKDGDKWSLMDFDFIKLKSIFNHWQAGMEEGNGWNAVFWC
NHDQPRIVSRFGDDNKYHKESAKMLATSIHLLRGTPYIYQGEEIGMTNCYYDTINSYRDVESINFYNILKSEDKTEEEII
KILQAKSRDNSRSPMQWDNSNNAGFTKEEPWIKVCKNYKDINVENSLKDKDSVFYHYQKLIKLRKEYDIISYGNFELILK
EDKSIFAYLRNYKNEKLLVINNFYGKEILFKLPTELKLGEYKNKILISNYKDSPIDFRKINLRPYESIVYHLERK

Sequences:

>Translated_555_residues
MKDFKKSVVYQIYPKSFNDTNDDGLGDLKGITVKLDYLKTLGIDYIWLTPFYISPQRDNGYDVADYCNIDPLFGTMEDFE
NLVREANKRGIDVMLDMVFNHTSTEHKWFKNALSGDKKYKNYYIFKEPKNKQLPTNWKSKFGGPAWEYVKELDEYYLHLF
DATQADLNWENEEVRTEVFDIVNFWIKKGVKGFRFDVINLISKPMEYRDDNNGDGRSFYTDGPNIHNHIKQLNKETFGRY
KDIITVGEMSSTTIDNCIKYSNPKEEELSMVFNFHHLKVDYKDGDKWSLMDFDFIKLKSIFNHWQAGMEEGNGWNAVFWC
NHDQPRIVSRFGDDNKYHKESAKMLATSIHLLRGTPYIYQGEEIGMTNCYYDTINSYRDVESINFYNILKSEDKTEEEII
KILQAKSRDNSRSPMQWDNSNNAGFTKEEPWIKVCKNYKDINVENSLKDKDSVFYHYQKLIKLRKEYDIISYGNFELILK
EDKSIFAYLRNYKNEKLLVINNFYGKEILFKLPTELKLGEYKNKILISNYKDSPIDFRKINLRPYESIVYHLERK
>Mature_555_residues
MKDFKKSVVYQIYPKSFNDTNDDGLGDLKGITVKLDYLKTLGIDYIWLTPFYISPQRDNGYDVADYCNIDPLFGTMEDFE
NLVREANKRGIDVMLDMVFNHTSTEHKWFKNALSGDKKYKNYYIFKEPKNKQLPTNWKSKFGGPAWEYVKELDEYYLHLF
DATQADLNWENEEVRTEVFDIVNFWIKKGVKGFRFDVINLISKPMEYRDDNNGDGRSFYTDGPNIHNHIKQLNKETFGRY
KDIITVGEMSSTTIDNCIKYSNPKEEELSMVFNFHHLKVDYKDGDKWSLMDFDFIKLKSIFNHWQAGMEEGNGWNAVFWC
NHDQPRIVSRFGDDNKYHKESAKMLATSIHLLRGTPYIYQGEEIGMTNCYYDTINSYRDVESINFYNILKSEDKTEEEII
KILQAKSRDNSRSPMQWDNSNNAGFTKEEPWIKVCKNYKDINVENSLKDKDSVFYHYQKLIKLRKEYDIISYGNFELILK
EDKSIFAYLRNYKNEKLLVINNFYGKEILFKLPTELKLGEYKNKILISNYKDSPIDFRKINLRPYESIVYHLERK

Specific function: Unknown

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI187423904, Length=578, Percent_Identity=29.757785467128, Blast_Score=234, Evalue=2e-61,
Organism=Escherichia coli, GI1790687, Length=549, Percent_Identity=51.183970856102, Blast_Score=611, Evalue=1e-176,
Organism=Escherichia coli, GI1786604, Length=224, Percent_Identity=25.4464285714286, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI1789995, Length=179, Percent_Identity=29.0502793296089, Blast_Score=64, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI25147709, Length=592, Percent_Identity=23.6486486486486, Blast_Score=113, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI32565753, Length=198, Percent_Identity=26.7676767676768, Blast_Score=86, Evalue=6e-17,
Organism=Saccharomyces cerevisiae, GI6322245, Length=578, Percent_Identity=39.2733564013841, Blast_Score=378, Evalue=1e-105,
Organism=Saccharomyces cerevisiae, GI6321726, Length=580, Percent_Identity=37.7586206896552, Blast_Score=361, Evalue=1e-100,
Organism=Saccharomyces cerevisiae, GI6324416, Length=580, Percent_Identity=36.8965517241379, Blast_Score=345, Evalue=1e-95,
Organism=Saccharomyces cerevisiae, GI6322241, Length=580, Percent_Identity=36.8965517241379, Blast_Score=345, Evalue=1e-95,
Organism=Saccharomyces cerevisiae, GI6322021, Length=580, Percent_Identity=36.8965517241379, Blast_Score=345, Evalue=1e-95,
Organism=Saccharomyces cerevisiae, GI6321731, Length=576, Percent_Identity=37.3263888888889, Blast_Score=342, Evalue=7e-95,
Organism=Saccharomyces cerevisiae, GI6319776, Length=576, Percent_Identity=37.1527777777778, Blast_Score=340, Evalue=2e-94,
Organism=Drosophila melanogaster, GI24583745, Length=526, Percent_Identity=33.4600760456274, Blast_Score=261, Evalue=1e-69,
Organism=Drosophila melanogaster, GI24586593, Length=585, Percent_Identity=29.7435897435897, Blast_Score=258, Evalue=6e-69,
Organism=Drosophila melanogaster, GI24583747, Length=535, Percent_Identity=34.392523364486, Blast_Score=258, Evalue=7e-69,
Organism=Drosophila melanogaster, GI24583749, Length=535, Percent_Identity=34.2056074766355, Blast_Score=258, Evalue=7e-69,
Organism=Drosophila melanogaster, GI24586591, Length=589, Percent_Identity=31.5789473684211, Blast_Score=251, Evalue=1e-66,
Organism=Drosophila melanogaster, GI24586599, Length=534, Percent_Identity=31.0861423220974, Blast_Score=250, Evalue=2e-66,
Organism=Drosophila melanogaster, GI24586589, Length=495, Percent_Identity=34.7474747474747, Blast_Score=249, Evalue=4e-66,
Organism=Drosophila melanogaster, GI221330053, Length=585, Percent_Identity=30.2564102564103, Blast_Score=249, Evalue=5e-66,
Organism=Drosophila melanogaster, GI45549022, Length=524, Percent_Identity=33.7786259541985, Blast_Score=247, Evalue=1e-65,
Organism=Drosophila melanogaster, GI24586597, Length=580, Percent_Identity=29.8275862068966, Blast_Score=244, Evalue=9e-65,
Organism=Drosophila melanogaster, GI24586587, Length=589, Percent_Identity=30.0509337860781, Blast_Score=230, Evalue=2e-60,
Organism=Drosophila melanogaster, GI281360393, Length=528, Percent_Identity=27.4621212121212, Blast_Score=195, Evalue=7e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR006589
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR012769 [H]

Pfam domain/function: PF00128 Alpha-amylase [H]

EC number: =3.2.1.93 [H]

Molecular weight: Translated: 65894; Mature: 65894

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDFKKSVVYQIYPKSFNDTNDDGLGDLKGITVKLDYLKTLGIDYIWLTPFYISPQRDNG
CCCHHHCCEEEECCCCCCCCCCCCCCCCCEEEEEEEHHHHCCCCEEEEEEEEECCCCCCC
YDVADYCNIDPLFGTMEDFENLVREANKRGIDVMLDMVFNHTSTEHKWFKNALSGDKKYK
CCHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC
NYYIFKEPKNKQLPTNWKSKFGGPAWEYVKELDEYYLHLFDATQADLNWENEEVRTEVFD
CEEEEECCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
IVNFWIKKGVKGFRFDVINLISKPMEYRDDNNGDGRSFYTDGPNIHNHIKQLNKETFGRY
HHHHHHHCCCCCHHHHHHHHHHCCHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHH
KDIITVGEMSSTTIDNCIKYSNPKEEELSMVFNFHHLKVDYKDGDKWSLMDFDFIKLKSI
HHEEEECCCCCHHHHHHHHCCCCCHHHHHHHEEEEEEEEEECCCCEEEECCCHHHHHHHH
FNHWQAGMEEGNGWNAVFWCNHDQPRIVSRFGDDNKYHKESAKMLATSIHLLRGTPYIYQ
HHHHHHHHCCCCCCEEEEEECCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEE
GEEIGMTNCYYDTINSYRDVESINFYNILKSEDKTEEEIIKILQAKSRDNSRSPMQWDNS
CCCCCCCHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
NNAGFTKEEPWIKVCKNYKDINVENSLKDKDSVFYHYQKLIKLRKEYDIISYGNFELILK
CCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCEEEEEE
EDKSIFAYLRNYKNEKLLVINNFYGKEILFKLPTELKLGEYKNKILISNYKDSPIDFRKI
CCHHHHHHHHHCCCCEEEEEECCCCCCCEEECCCCCCCCCCCCEEEEECCCCCCCCEEEE
NLRPYESIVYHLERK
CCCHHHHHHHHHCCC
>Mature Secondary Structure
MKDFKKSVVYQIYPKSFNDTNDDGLGDLKGITVKLDYLKTLGIDYIWLTPFYISPQRDNG
CCCHHHCCEEEECCCCCCCCCCCCCCCCCEEEEEEEHHHHCCCCEEEEEEEEECCCCCCC
YDVADYCNIDPLFGTMEDFENLVREANKRGIDVMLDMVFNHTSTEHKWFKNALSGDKKYK
CCHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC
NYYIFKEPKNKQLPTNWKSKFGGPAWEYVKELDEYYLHLFDATQADLNWENEEVRTEVFD
CEEEEECCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
IVNFWIKKGVKGFRFDVINLISKPMEYRDDNNGDGRSFYTDGPNIHNHIKQLNKETFGRY
HHHHHHHCCCCCHHHHHHHHHHCCHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHH
KDIITVGEMSSTTIDNCIKYSNPKEEELSMVFNFHHLKVDYKDGDKWSLMDFDFIKLKSI
HHEEEECCCCCHHHHHHHHCCCCCHHHHHHHEEEEEEEEEECCCCEEEECCCHHHHHHHH
FNHWQAGMEEGNGWNAVFWCNHDQPRIVSRFGDDNKYHKESAKMLATSIHLLRGTPYIYQ
HHHHHHHHCCCCCCEEEEEECCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEE
GEEIGMTNCYYDTINSYRDVESINFYNILKSEDKTEEEIIKILQAKSRDNSRSPMQWDNS
CCCCCCCHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
NNAGFTKEEPWIKVCKNYKDINVENSLKDKDSVFYHYQKLIKLRKEYDIISYGNFELILK
CCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCEEEEEE
EDKSIFAYLRNYKNEKLLVINNFYGKEILFKLPTELKLGEYKNKILISNYKDSPIDFRKI
CCHHHHHHHHHCCCCEEEEEECCCCCCCEEECCCCCCCCCCCCEEEEECCCCCCCCEEEE
NLRPYESIVYHLERK
CCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7651129; 8969503; 9384377; 7751281 [H]