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The map label for this gene is yabE [H]

Identifier: 153935585

GI number: 153935585

Start: 102963

End: 104021

Strand: Direct

Name: yabE [H]

Synonym: CLC_0126

Alternate gene names: 153935585

Gene position: 102963-104021 (Clockwise)

Preceding gene: 153934841

Following gene: 153936070

Centisome position: 2.74

GC content: 32.77

Gene sequence:

>1059_bases
ATGGTGGAAAAATTAAAGAAGAAAATTAAAGAACATTTTTCCAATGGTCCTAAGGCAATTTTGATTGTTGTAGTAATCTT
AATGATAGCGAGCATAGTAATTACTAATATGAGAAAAACAATAATTGTTTCAATAGACGGAAAAGAAAGCCAAAAAATTA
CAACATTTAAAAAAACATATGCAAAAGCCTTAACGTCGAAAAATATACAAGTGGGACCAAAGGACAAAGTTCAGCCCCAA
TTGGACGCTGAAATTAAAGACGGAAGCAAATTAAGCATAAAGAAAGCAGTTAAAGTTAATGTAGAAGTTGATGGTAAGAA
ATTAGCTATTCAATCCGCAGAAAACAATATAGGAGATATGCTAAAAAAAGAGGGTATACAAGTTAAAAAACTTGATAAAG
TAGCCCCAAGCAAAGAAGAAGAGATAAAAAAGGGATTGAAAGTAACAGTTACAAGAGTAGAAGAAAAAGTAATAAAGAGC
AAAAAAAATATGGATTATGAAACAGTAGTTAAAGAAGATGATTCCCTTGAAAAAGGTGACAAAAAAGTCATAAGGGAAGG
ACAAAATGGAGAAAAAGAAGTAACAACAAAAGTAGTTTTTGAAGATGGAAAAGAAAAAGTAAGAAAAGTAGTATCAGAAA
GCATAAAAAAGCAACCAGTATCTAAGGTAGTTGCAATGGGAACTAAAGTTACAACTGTTAACGCTCTTTCTAGAGGAGGA
AGTGTTACTGGTACGCCAGGTGGTAGATTATTAAGAATGAGAGCTACAGCATATACATCAAGTTATGAAGATACAGGTAA
GAGTCCTGGAAGCCCTGATTTTGGAGTTACAGCCACAGGAACTACAGCAAGAAGAAATTCAGGAGGATATAGTTCAATAG
CAGTAGATCCAAGGGTAATACCTTTAGGAACAAAACTGTTTGTTGAAGGTTATGGATATGCTATAGCAGAAGATACCGGT
GGAGCAATAAAAGGAAATGTTATTGATTTATATTTTGATTCCAATGTTGAAGTATCAAATTGGGGTTCAAGATGGGTGAA
TGTTTATATTTTAGATTAA

Upstream 100 bases:

>100_bases
CACAAAGGCTGCATTATTAACCAAAAAGCATGAGCAAATTTGACAGATTTAAATATACCGAATATAATAGCAATGTTGCT
CTTGCCCGAAGGAGGTTTTT

Downstream 100 bases:

>100_bases
TTTAAGTAGGAGCGTTAGCTCCTATTTTTTTCTATTAAAAATATTATATAATAGTTATATTGGAGGGATATTATGATTAA
GGAAGTTATAGTAGTAGAAG

Product: 3D/G5 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MVEKLKKKIKEHFSNGPKAILIVVVILMIASIVITNMRKTIIVSIDGKESQKITTFKKTYAKALTSKNIQVGPKDKVQPQ
LDAEIKDGSKLSIKKAVKVNVEVDGKKLAIQSAENNIGDMLKKEGIQVKKLDKVAPSKEEEIKKGLKVTVTRVEEKVIKS
KKNMDYETVVKEDDSLEKGDKKVIREGQNGEKEVTTKVVFEDGKEKVRKVVSESIKKQPVSKVVAMGTKVTTVNALSRGG
SVTGTPGGRLLRMRATAYTSSYEDTGKSPGSPDFGVTATGTTARRNSGGYSSIAVDPRVIPLGTKLFVEGYGYAIAEDTG
GAIKGNVIDLYFDSNVEVSNWGSRWVNVYILD

Sequences:

>Translated_352_residues
MVEKLKKKIKEHFSNGPKAILIVVVILMIASIVITNMRKTIIVSIDGKESQKITTFKKTYAKALTSKNIQVGPKDKVQPQ
LDAEIKDGSKLSIKKAVKVNVEVDGKKLAIQSAENNIGDMLKKEGIQVKKLDKVAPSKEEEIKKGLKVTVTRVEEKVIKS
KKNMDYETVVKEDDSLEKGDKKVIREGQNGEKEVTTKVVFEDGKEKVRKVVSESIKKQPVSKVVAMGTKVTTVNALSRGG
SVTGTPGGRLLRMRATAYTSSYEDTGKSPGSPDFGVTATGTTARRNSGGYSSIAVDPRVIPLGTKLFVEGYGYAIAEDTG
GAIKGNVIDLYFDSNVEVSNWGSRWVNVYILD
>Mature_352_residues
MVEKLKKKIKEHFSNGPKAILIVVVILMIASIVITNMRKTIIVSIDGKESQKITTFKKTYAKALTSKNIQVGPKDKVQPQ
LDAEIKDGSKLSIKKAVKVNVEVDGKKLAIQSAENNIGDMLKKEGIQVKKLDKVAPSKEEEIKKGLKVTVTRVEEKVIKS
KKNMDYETVVKEDDSLEKGDKKVIREGQNGEKEVTTKVVFEDGKEKVRKVVSESIKKQPVSKVVAMGTKVTTVNALSRGG
SVTGTPGGRLLRMRATAYTSSYEDTGKSPGSPDFGVTATGTTARRNSGGYSSIAVDPRVIPLGTKLFVEGYGYAIAEDTG
GAIKGNVIDLYFDSNVEVSNWGSRWVNVYILD

Specific function: Unknown

COG id: COG3583

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G5 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010611
- InterPro:   IPR014733
- InterPro:   IPR007137
- InterPro:   IPR011098 [H]

Pfam domain/function: PF06725 3D; PF03990 DUF348; PF07501 G5 [H]

EC number: NA

Molecular weight: Translated: 38384; Mature: 38384

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: PS51109 G5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEKLKKKIKEHFSNGPKAILIVVVILMIASIVITNMRKTIIVSIDGKESQKITTFKKTY
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHH
AKALTSKNIQVGPKDKVQPQLDAEIKDGSKLSIKKAVKVNVEVDGKKLAIQSAENNIGDM
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCEEEEECCCCCHHHH
LKKEGIQVKKLDKVAPSKEEEIKKGLKVTVTRVEEKVIKSKKNMDYETVVKEDDSLEKGD
HHHCCCCEEEHHHCCCCCHHHHHCCCEEEEHHHHHHHHHHHCCCCHHHHCCCCCCCCCCC
KKVIREGQNGEKEVTTKVVFEDGKEKVRKVVSESIKKQPVSKVVAMGTKVTTVNALSRGG
HHHHHCCCCCCHHHEEEEEECCCHHHHHHHHHHHHHHCHHHHHHHCCCCEEEEHHHHCCC
SVTGTPGGRLLRMRATAYTSSYEDTGKSPGSPDFGVTATGTTARRNSGGYSSIAVDPRVI
CCCCCCCCEEEEEEEHHHCCCHHHCCCCCCCCCCCEEECCCCCCCCCCCCCEEEECCEEE
PLGTKLFVEGYGYAIAEDTGGAIKGNVIDLYFDSNVEVSNWGSRWVNVYILD
ECCCEEEEECCCEEEEECCCCEEECCEEEEEECCCEEECCCCCEEEEEEEEC
>Mature Secondary Structure
MVEKLKKKIKEHFSNGPKAILIVVVILMIASIVITNMRKTIIVSIDGKESQKITTFKKTY
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHH
AKALTSKNIQVGPKDKVQPQLDAEIKDGSKLSIKKAVKVNVEVDGKKLAIQSAENNIGDM
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCEEEEECCCCCHHHH
LKKEGIQVKKLDKVAPSKEEEIKKGLKVTVTRVEEKVIKSKKNMDYETVVKEDDSLEKGD
HHHCCCCEEEHHHCCCCCHHHHHCCCEEEEHHHHHHHHHHHCCCCHHHHCCCCCCCCCCC
KKVIREGQNGEKEVTTKVVFEDGKEKVRKVVSESIKKQPVSKVVAMGTKVTTVNALSRGG
HHHHHCCCCCCHHHEEEEEECCCHHHHHHHHHHHHHHCHHHHHHHCCCCEEEEHHHHCCC
SVTGTPGGRLLRMRATAYTSSYEDTGKSPGSPDFGVTATGTTARRNSGGYSSIAVDPRVI
CCCCCCCCEEEEEEEHHHCCCHHHCCCCCCCCCCCEEECCCCCCCCCCCCCEEEECCEEE
PLGTKLFVEGYGYAIAEDTGGAIKGNVIDLYFDSNVEVSNWGSRWVNVYILD
ECCCEEEEECCCEEEEECCCCEEECCEEEEEECCCEEECCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]