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The map label for this gene is yqaS [H]

Identifier: 153932734

GI number: 153932734

Start: 3126956

End: 3127447

Strand: Reverse

Name: yqaS [H]

Synonym: CLB_2974

Alternate gene names: 153932734

Gene position: 3127447-3126956 (Counterclockwise)

Preceding gene: 153931880

Following gene: 153933850

Centisome position: 80.95

GC content: 30.89

Gene sequence:

>492_bases
TTGGATGAAAAAGAGGATTTAATAATTAAGGATAAAGCTTATAAAGACTATGTTTCTGGAATGAAGTATAAAGATATTGC
AGAAAAATATAGTGTATCTATTAATACAGTTAAAAGTTGGAAACGTAGATTGAATTGGCAAAGGAAAACGAACCCTAAAA
AGGGTGCAAAGTTGCAAGAGTTGCAAGAGTTGGCAAAAGACATAAAAGAGGATCTATTAAAGCAACTAAAAGAAAATGAA
ACTCATGGGAAGCATTATGAAGATTTAGTAAGTGATTATATGGCTCTATGGGATATTAAAAATAGACTTATAGCAGATAT
AAAAGAAAGAGGTGTATCTGTAGAGTGGAATAATGGAAAACAAGTAGGTAGAAAGAAAAATGATAGTATACCAGAACTCA
ACAAAACAAGTGCTCAAATGCTTAAGATTTTAGCAGAATTAGGCTTAAAACCATCACCAAAGGAAAATAGCGATAATGAT
GACGAAATGTAA

Upstream 100 bases:

>100_bases
CAAAAGATATTTTCTCAAAAAAGTAACATGAGAGGGGGGTGCAACTTAAAAAAATAAGGTGTGCAAACCCTAAAAATAGG
CTAGAATTGAGGTGGTGATT

Downstream 100 bases:

>100_bases
ATTCAATAAATACATTGATGATTATATGGATAAAATATGCAGCGGTAAAATACCAGCATCTAAAGAATTACATCAGGCCA
TGGATTATATTGAAGAAAAG

Product: putative phage terminase, small subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MDEKEDLIIKDKAYKDYVSGMKYKDIAEKYSVSINTVKSWKRRLNWQRKTNPKKGAKLQELQELAKDIKEDLLKQLKENE
THGKHYEDLVSDYMALWDIKNRLIADIKERGVSVEWNNGKQVGRKKNDSIPELNKTSAQMLKILAELGLKPSPKENSDND
DEM

Sequences:

>Translated_163_residues
MDEKEDLIIKDKAYKDYVSGMKYKDIAEKYSVSINTVKSWKRRLNWQRKTNPKKGAKLQELQELAKDIKEDLLKQLKENE
THGKHYEDLVSDYMALWDIKNRLIADIKERGVSVEWNNGKQVGRKKNDSIPELNKTSAQMLKILAELGLKPSPKENSDND
DEM
>Mature_163_residues
MDEKEDLIIKDKAYKDYVSGMKYKDIAEKYSVSINTVKSWKRRLNWQRKTNPKKGAKLQELQELAKDIKEDLLKQLKENE
THGKHYEDLVSDYMALWDIKNRLIADIKERGVSVEWNNGKQVGRKKNDSIPELNKTSAQMLKILAELGLKPSPKENSDND
DEM

Specific function: Unknown

COG id: COG5484

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018925 [H]

Pfam domain/function: PF10668 Phage_terminase [H]

EC number: NA

Molecular weight: Translated: 19025; Mature: 19025

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEKEDLIIKDKAYKDYVSGMKYKDIAEKYSVSINTVKSWKRRLNWQRKTNPKKGAKLQE
CCCCCCEEECHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
LQELAKDIKEDLLKQLKENETHGKHYEDLVSDYMALWDIKNRLIADIKERGVSVEWNNGK
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCH
QVGRKKNDSIPELNKTSAQMLKILAELGLKPSPKENSDNDDEM
HHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDEKEDLIIKDKAYKDYVSGMKYKDIAEKYSVSINTVKSWKRRLNWQRKTNPKKGAKLQE
CCCCCCEEECHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
LQELAKDIKEDLLKQLKENETHGKHYEDLVSDYMALWDIKNRLIADIKERGVSVEWNNGK
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCH
QVGRKKNDSIPELNKTSAQMLKILAELGLKPSPKENSDNDDEM
HHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895 [H]