| Definition | Anaeromyxobacter sp. Fw109-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009675 |
| Length | 5,277,990 |
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The map label for this gene is 153002903
Identifier: 153002903
GI number: 153002903
Start: 29495
End: 29737
Strand: Reverse
Name: 153002903
Synonym: Anae109_0024
Alternate gene names: NA
Gene position: 29737-29495 (Counterclockwise)
Preceding gene: 153002904
Following gene: 153002891
Centisome position: 0.56
GC content: 68.31
Gene sequence:
>243_bases ATGTCACGGAGGGCGTACCTCACCCGGAGCCTTCACATGCCCGCACTCGCCGACAAGTTCGCCCTGAACCTCAAGAGCGA ACGTCTCCGCCGCAAGCTGTCCCAGGAGGCCCTCGCCACGAAGGCGCGGCTCTCGGTCTCCTACATCTCGATGCTCGAGC GGCGCCAGCGGACGCCGCCCCTCGAGACGCTCGAGTGCCTCGCGAAGGCCCTCGCGGTCTCGCCGACGTCGCTGCTCGAG TGA
Upstream 100 bases:
>100_bases GCGCCCCCGCAAGTAGGGACACGCTGCGTCCTGGCGCATCCTCACGCTGAGTGGTAGTGTCCCTCGTGCCGCCCTCGCAG CACATGTTGCGGAGTCCGCA
Downstream 100 bases:
>100_bases GCGGGCCGGCGCGGCCGAGCGCCGCGCGACGGCTCAGCGGTCGACGCGCATCACGATCTCGGGGAAGAGGGCCGTGAGCG AGCTCGCGAGCTTCTTCTGC
Product: helix-turn-helix domain-containing protein
Products: NA
Alternate protein names: XRE Family Transcriptional Regulator
Number of amino acids: Translated: 80; Mature: 79
Protein sequence:
>80_residues MSRRAYLTRSLHMPALADKFALNLKSERLRRKLSQEALATKARLSVSYISMLERRQRTPPLETLECLAKALAVSPTSLLE
Sequences:
>Translated_80_residues MSRRAYLTRSLHMPALADKFALNLKSERLRRKLSQEALATKARLSVSYISMLERRQRTPPLETLECLAKALAVSPTSLLE >Mature_79_residues SRRAYLTRSLHMPALADKFALNLKSERLRRKLSQEALATKARLSVSYISMLERRQRTPPLETLECLAKALAVSPTSLLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9099; Mature: 8968
Theoretical pI: Translated: 11.23; Mature: 11.23
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRAYLTRSLHMPALADKFALNLKSERLRRKLSQEALATKARLSVSYISMLERRQRTPP CCCCHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LETLECLAKALAVSPTSLLE HHHHHHHHHHHHCCCHHHCC >Mature Secondary Structure SRRAYLTRSLHMPALADKFALNLKSERLRRKLSQEALATKARLSVSYISMLERRQRTPP CCCHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LETLECLAKALAVSPTSLLE HHHHHHHHHHHHCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA