Click here to switch to the map view.

The map label for this gene is yycH [H]

Identifier: 152977663

GI number: 152977663

Start: 4061731

End: 4063071

Strand: Reverse

Name: yycH [H]

Synonym: Bcer98_4004

Alternate gene names: 152977663

Gene position: 4063071-4061731 (Counterclockwise)

Preceding gene: 152977664

Following gene: 152977662

Centisome position: 99.41

GC content: 32.89

Gene sequence:

>1341_bases
ATGGAAAACTTTAAAACCATTGTGCTAATTAATTTAGTAGTTATTAGTTTGTTTCTTACGTTTAATCTATGGACATATGT
GCCTGATTCTAATTCGATGCAGAACACGAAGTTTGTTGAAGGAACTACAGTGCCAGAAAGTGCGGATGTTTCGAACGTCA
TTCTTCCATCTTCTGTAATCGTTCATAAAGATAATAAACGTCATTTCGTAAGTGAAAAACAAGAAAATATAAACTTAATA
TATAACATTTTGAAAAATGGTGAATTACAAGATTGGACAAATATAACAAGTACAATTCCTAAGAGTGAGTTTTTATCCTA
TGTACATGGGGAAGGGAAAATTGAAATTGTCTTCCCTACCACTATTCCATTTGGAGCCATAAGAAGCGTGCTGTCGATTA
AAGATAAAAAGTTAGAAAAGCAAAGTTTTGATCGAATTATTATTGATCCTTCCAGAAGCCGAGATCAAAACATTGATATC
AATTTTGTTGCGTATAATAGTCGTCAAATTTATAGAATGACATTAAAAGATGTGAATGTACGAGATATTGTAAATGCAGA
AAATAAATTTGTTGTATTAGCAAGGCCATATTTTGAGTATCGAATCAATAATGCAAAAAGCATATTCTTACCAGATGGAG
CCACGGAAAAAAGAAATTGGATGTATATTACGAGCAATATGGAAATAGAGGCATTTAAAAATGCGCTGTTTAGTGATCCA
CGTTATGCAACGCTAATTTCGAATAATCATACAGATGAAACATATACGGATGGAATTCGTTCCATGCAGATTAAACAGAA
TGGTATTAAGCTTGAATATACAAATTCATCTATAACTCGTGATAATAGTATAGATGATAATATTCTTGTCCAAAAAAGTT
TTGAATTTCTGAATGGACATAATGGTATAACAGATAACTATCGTTTTGTATATGTAGATCCTAAGGGTGAAACAAAATTC
CGTTTATATGAGAATGATTTACCTGTATTTAATAAAGATCGATTAACGACAATAAAACAAATCTGGGGTTCTGAGGGACT
GATTAGTTATCAAAGGCCGTTATTTAAATTTGCAGGAAGCAGTCAAGAAGACAAAGTTATACTTCCACCTGGTCATACCG
TAATTCAGTCATTAGCCAATAATCCAGATATCGATAAGAATTTGATTCAAAATATCGGAATTGGTTATAAGTTTGTGTTA
GGAAATCATCCGAGTGGACCGATGGGTACTAAAACAATAACTGGTATGTTAAAACCAATTTGGTACGTGGAGTATGGGGA
AGACCATATGATGTATGAGTGGAGTGAAGAGAAAGGGGGAAGTCTGATTGGACTGGAATAG

Upstream 100 bases:

>100_bases
ATGGTGGATCTATTTGGGCAAAGAGTGAAGAAGGAAAAGGAACGACAATTTACTTTACCCTCCCGTTGGCGAAAGAAGAA
GAGGACGATTGGGAATGAAT

Downstream 100 bases:

>100_bases
GATTAAAACAATTTTTATTGTTACCTTTTTTGTTTTAGACCTCTTTCTCGTGTTTCAATTCATTCAAAAGCAAAATAATA
ATGAATTAGAACTTATGACG

Product: YycH family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MENFKTIVLINLVVISLFLTFNLWTYVPDSNSMQNTKFVEGTTVPESADVSNVILPSSVIVHKDNKRHFVSEKQENINLI
YNILKNGELQDWTNITSTIPKSEFLSYVHGEGKIEIVFPTTIPFGAIRSVLSIKDKKLEKQSFDRIIIDPSRSRDQNIDI
NFVAYNSRQIYRMTLKDVNVRDIVNAENKFVVLARPYFEYRINNAKSIFLPDGATEKRNWMYITSNMEIEAFKNALFSDP
RYATLISNNHTDETYTDGIRSMQIKQNGIKLEYTNSSITRDNSIDDNILVQKSFEFLNGHNGITDNYRFVYVDPKGETKF
RLYENDLPVFNKDRLTTIKQIWGSEGLISYQRPLFKFAGSSQEDKVILPPGHTVIQSLANNPDIDKNLIQNIGIGYKFVL
GNHPSGPMGTKTITGMLKPIWYVEYGEDHMMYEWSEEKGGSLIGLE

Sequences:

>Translated_446_residues
MENFKTIVLINLVVISLFLTFNLWTYVPDSNSMQNTKFVEGTTVPESADVSNVILPSSVIVHKDNKRHFVSEKQENINLI
YNILKNGELQDWTNITSTIPKSEFLSYVHGEGKIEIVFPTTIPFGAIRSVLSIKDKKLEKQSFDRIIIDPSRSRDQNIDI
NFVAYNSRQIYRMTLKDVNVRDIVNAENKFVVLARPYFEYRINNAKSIFLPDGATEKRNWMYITSNMEIEAFKNALFSDP
RYATLISNNHTDETYTDGIRSMQIKQNGIKLEYTNSSITRDNSIDDNILVQKSFEFLNGHNGITDNYRFVYVDPKGETKF
RLYENDLPVFNKDRLTTIKQIWGSEGLISYQRPLFKFAGSSQEDKVILPPGHTVIQSLANNPDIDKNLIQNIGIGYKFVL
GNHPSGPMGTKTITGMLKPIWYVEYGEDHMMYEWSEEKGGSLIGLE
>Mature_446_residues
MENFKTIVLINLVVISLFLTFNLWTYVPDSNSMQNTKFVEGTTVPESADVSNVILPSSVIVHKDNKRHFVSEKQENINLI
YNILKNGELQDWTNITSTIPKSEFLSYVHGEGKIEIVFPTTIPFGAIRSVLSIKDKKLEKQSFDRIIIDPSRSRDQNIDI
NFVAYNSRQIYRMTLKDVNVRDIVNAENKFVVLARPYFEYRINNAKSIFLPDGATEKRNWMYITSNMEIEAFKNALFSDP
RYATLISNNHTDETYTDGIRSMQIKQNGIKLEYTNSSITRDNSIDDNILVQKSFEFLNGHNGITDNYRFVYVDPKGETKF
RLYENDLPVFNKDRLTTIKQIWGSEGLISYQRPLFKFAGSSQEDKVILPPGHTVIQSLANNPDIDKNLIQNIGIGYKFVL
GNHPSGPMGTKTITGMLKPIWYVEYGEDHMMYEWSEEKGGSLIGLE

Specific function: Together with yycI, regulates the activity of the two- component system yycF/yycG [H]

COG id: COG4863

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009996 [H]

Pfam domain/function: PF07435 YycH [H]

EC number: NA

Molecular weight: Translated: 51185; Mature: 51185

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENFKTIVLINLVVISLFLTFNLWTYVPDSNSMQNTKFVEGTTVPESADVSNVILPSSVI
CCCCEEEHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEECCCCCCCCCCCCEEECCEEE
VHKDNKRHFVSEKQENINLIYNILKNGELQDWTNITSTIPKSEFLSYVHGEGKIEIVFPT
EEECCCCCCCCCCCCCHHEEEHHHCCCCCCHHHHHHHCCCHHHHHHHHCCCCEEEEEEEC
TIPFGAIRSVLSIKDKKLEKQSFDRIIIDPSRSRDQNIDINFVAYNSRQIYRMTLKDVNV
CCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEEEEECCCEEEEEEECCCCH
RDIVNAENKFVVLARPYFEYRINNAKSIFLPDGATEKRNWMYITSNMEIEAFKNALFSDP
HHHCCCCCCEEEEECCEEEEEECCCCEEEECCCCCCCCCEEEEECCCCHHHHHHHHCCCC
RYATLISNNHTDETYTDGIRSMQIKQNGIKLEYTNSSITRDNSIDDNILVQKSFEFLNGH
CEEEEECCCCCCCHHHCCHHEEEEECCCEEEEECCCCCCCCCCCCCCEEEEEHHHHHCCC
NGITDNYRFVYVDPKGETKFRLYENDLPVFNKDRLTTIKQIWGSEGLISYQRPLFKFAGS
CCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCEEHHHCHHHHHCCC
SQEDKVILPPGHTVIQSLANNPDIDKNLIQNIGIGYKFVLGNHPSGPMGTKTITGMLKPI
CCCCEEEECCCHHHHHHHCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHCEE
WYVEYGEDHMMYEWSEEKGGSLIGLE
EEEEECCCCEEEEECCCCCCEEECCC
>Mature Secondary Structure
MENFKTIVLINLVVISLFLTFNLWTYVPDSNSMQNTKFVEGTTVPESADVSNVILPSSVI
CCCCEEEHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEECCCCCCCCCCCCEEECCEEE
VHKDNKRHFVSEKQENINLIYNILKNGELQDWTNITSTIPKSEFLSYVHGEGKIEIVFPT
EEECCCCCCCCCCCCCHHEEEHHHCCCCCCHHHHHHHCCCHHHHHHHHCCCCEEEEEEEC
TIPFGAIRSVLSIKDKKLEKQSFDRIIIDPSRSRDQNIDINFVAYNSRQIYRMTLKDVNV
CCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEEEEECCCEEEEEEECCCCH
RDIVNAENKFVVLARPYFEYRINNAKSIFLPDGATEKRNWMYITSNMEIEAFKNALFSDP
HHHCCCCCCEEEEECCEEEEEECCCCEEEECCCCCCCCCEEEEECCCCHHHHHHHHCCCC
RYATLISNNHTDETYTDGIRSMQIKQNGIKLEYTNSSITRDNSIDDNILVQKSFEFLNGH
CEEEEECCCCCCCHHHCCHHEEEEECCCEEEEECCCCCCCCCCCCCCEEEEEHHHHHCCC
NGITDNYRFVYVDPKGETKFRLYENDLPVFNKDRLTTIKQIWGSEGLISYQRPLFKFAGS
CCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCEEHHHCHHHHHCCC
SQEDKVILPPGHTVIQSLANNPDIDKNLIQNIGIGYKFVLGNHPSGPMGTKTITGMLKPI
CCCCEEEECCCHHHHHHHCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHCEE
WYVEYGEDHMMYEWSEEKGGSLIGLE
EEEEECCCCEEEEECCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]