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The map label for this gene is yycI [H]

Identifier: 152977662

GI number: 152977662

Start: 4060908

End: 4061744

Strand: Reverse

Name: yycI [H]

Synonym: Bcer98_4003

Alternate gene names: 152977662

Gene position: 4061744-4060908 (Counterclockwise)

Preceding gene: 152977663

Following gene: 152977661

Centisome position: 99.38

GC content: 29.99

Gene sequence:

>837_bases
TTGGACTGGAATAGGATTAAAACAATTTTTATTGTTACCTTTTTTGTTTTAGACCTCTTTCTCGTGTTTCAATTCATTCA
AAAGCAAAATAATAATGAATTAGAACTTATGACGGAAACAAAAATAGATCAGCAACTAAAAGCTGATCATATTACGGTTG
ATGATTTACCAAACGAACCAAAGAAAGATTCATTTATTATAGCGAAAAATAAAGTTTTTAAGGAAGAAGATATTCATTCT
TTAAAAAATCAAACACCTAGATTACAAGAGGATGCTAAAAAAATTGAAAGTGATCTAAAGGAGCCAATACAAAATACGAA
AACACTAGCTAAAGATAAATATGGTGATTTTTTAAGAAATTATGTGGTAGATGGTCAAAAGTATGAATTTGCAAAATCAG
AGGCTTCAAAAATTTATTTCTTTCAAAAATATAAAGACAAACCTATTTTTTACAATGATCATGCGATGATTATCGTTACT
TTAAATGAAAAGGATGAAATCGTTTCATATACGCAAACTATGTTAACGGATTTGAAAGAAATGGGTGAGAATGATAAAGC
GAAAGAACAAGAGATTATTTCGGCTCAGAAAGCTTTAGAAAATTTATTTGTGAAGCAGGAATTAACCCCAAATACGCATA
TTAAAGAAGCGCAAATTGGTTATGCAACACTCGTTTCTTTAGCTGAATCGAATAAACAAGTATTGACTCCAACGTGGAAT
TTAAAGGAAAAAGGAAAAAAAGATCACTTTGTAAATGCCATTGAGGGACAAGTTATTAAGCTAGGCGAAGAAAAAGAAAA
ATACAATGGAGTGAATGGGAATGAGTCTGCATTTTAG

Upstream 100 bases:

>100_bases
ACTAAAACAATAACTGGTATGTTAAAACCAATTTGGTACGTGGAGTATGGGGAAGACCATATGATGTATGAGTGGAGTGA
AGAGAAAGGGGGAAGTCTGA

Downstream 100 bases:

>100_bases
TGTACTTGCGAGTGGCAGTACAGGAAATGCGCTGTATGTCGGAACTGACAAGCAAAAGTTGCTTGTTGATGCAGGCTTGA
GTGGTAAAGCAACAGAGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MDWNRIKTIFIVTFFVLDLFLVFQFIQKQNNNELELMTETKIDQQLKADHITVDDLPNEPKKDSFIIAKNKVFKEEDIHS
LKNQTPRLQEDAKKIESDLKEPIQNTKTLAKDKYGDFLRNYVVDGQKYEFAKSEASKIYFFQKYKDKPIFYNDHAMIIVT
LNEKDEIVSYTQTMLTDLKEMGENDKAKEQEIISAQKALENLFVKQELTPNTHIKEAQIGYATLVSLAESNKQVLTPTWN
LKEKGKKDHFVNAIEGQVIKLGEEKEKYNGVNGNESAF

Sequences:

>Translated_278_residues
MDWNRIKTIFIVTFFVLDLFLVFQFIQKQNNNELELMTETKIDQQLKADHITVDDLPNEPKKDSFIIAKNKVFKEEDIHS
LKNQTPRLQEDAKKIESDLKEPIQNTKTLAKDKYGDFLRNYVVDGQKYEFAKSEASKIYFFQKYKDKPIFYNDHAMIIVT
LNEKDEIVSYTQTMLTDLKEMGENDKAKEQEIISAQKALENLFVKQELTPNTHIKEAQIGYATLVSLAESNKQVLTPTWN
LKEKGKKDHFVNAIEGQVIKLGEEKEKYNGVNGNESAF
>Mature_278_residues
MDWNRIKTIFIVTFFVLDLFLVFQFIQKQNNNELELMTETKIDQQLKADHITVDDLPNEPKKDSFIIAKNKVFKEEDIHS
LKNQTPRLQEDAKKIESDLKEPIQNTKTLAKDKYGDFLRNYVVDGQKYEFAKSEASKIYFFQKYKDKPIFYNDHAMIIVT
LNEKDEIVSYTQTMLTDLKEMGENDKAKEQEIISAQKALENLFVKQELTPNTHIKEAQIGYATLVSLAESNKQVLTPTWN
LKEKGKKDHFVNAIEGQVIKLGEEKEKYNGVNGNESAF

Specific function: Together with yycH, regulates the activity of the two- component system yycF/yycG [H]

COG id: COG4853

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018604 [H]

Pfam domain/function: PF09648 YycI [H]

EC number: NA

Molecular weight: Translated: 32328; Mature: 32328

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWNRIKTIFIVTFFVLDLFLVFQFIQKQNNNELELMTETKIDQQLKADHITVDDLPNEP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHCCEEECCCCCCC
KKDSFIIAKNKVFKEEDIHSLKNQTPRLQEDAKKIESDLKEPIQNTKTLAKDKYGDFLRN
CCCCEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVVDGQKYEFAKSEASKIYFFQKYKDKPIFYNDHAMIIVTLNEKDEIVSYTQTMLTDLKE
HHCCCCHHHHHHHCHHEEEEEEECCCCCEEECCCEEEEEEECCCHHHHHHHHHHHHHHHH
MGENDKAKEQEIISAQKALENLFVKQELTPNTHIKEAQIGYATLVSLAESNKQVLTPTWN
HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCC
LKEKGKKDHFVNAIEGQVIKLGEEKEKYNGVNGNESAF
CHHCCCCHHHHHHHCCCEEECCCHHHHHCCCCCCCCCC
>Mature Secondary Structure
MDWNRIKTIFIVTFFVLDLFLVFQFIQKQNNNELELMTETKIDQQLKADHITVDDLPNEP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHCCEEECCCCCCC
KKDSFIIAKNKVFKEEDIHSLKNQTPRLQEDAKKIESDLKEPIQNTKTLAKDKYGDFLRN
CCCCEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVVDGQKYEFAKSEASKIYFFQKYKDKPIFYNDHAMIIVTLNEKDEIVSYTQTMLTDLKE
HHCCCCHHHHHHHCHHEEEEEEECCCCCEEECCCEEEEEEECCCHHHHHHHHHHHHHHHH
MGENDKAKEQEIISAQKALENLFVKQELTPNTHIKEAQIGYATLVSLAESNKQVLTPTWN
HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCC
LKEKGKKDHFVNAIEGQVIKLGEEKEKYNGVNGNESAF
CHHCCCCHHHHHHHCCCEEECCCHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]