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The map label for this gene is ypmR [H]

Identifier: 152977584

GI number: 152977584

Start: 3974782

End: 3975594

Strand: Reverse

Name: ypmR [H]

Synonym: Bcer98_3922

Alternate gene names: 152977584

Gene position: 3975594-3974782 (Counterclockwise)

Preceding gene: 152977585

Following gene: 152977583

Centisome position: 97.27

GC content: 37.39

Gene sequence:

>813_bases
ATGAGGGCAAAATTAGTAAAGGTAATATTACTTCTTACGGTGGCGTCTTTTTGCTTATTTGCATACGGTTTTCTTTCAGG
TATTCATGATGTATTAAATCCAAAAGCTTCGAATGTAGTCATGAAACGAGAAGAGGCGCAAGGAAAAGAAAAAAAGAAAG
CTGGGACGTTACAAGTAGTTAGCTTAGGAGACTCGCTAACGAGAGGTGTTGGCGATAAAGAAGGAATTGGTTATGTTGGA
CGCATGAAAGAAGATTTGGAAAAAGGGGATAAGACAAAAGTTGCAATAACGAATTTAGCTGTTAGTGGAGCGAAGATGGC
GGATTTGTTACAGCAAATCGAGAGTAGCGGCGCTAGATATTCCATTAAGCGTGCGGATCTTATTGTGCTAACAATTGGGG
GGAATGATTTATTCCCAGGTTGGGAATCGCTTGAGAAAATAGACTTGGAAACATATCGCCCAGATACGGAAATGTTTCAA
AATCAAGCAAGGAAAATTATAACAGAAATTCGTAAATTAAATGCGGATAGTCCTATTTTTTGGCTAGGGTTATATAATCC
TTTCGAAGATGTAGAAGACTTAAAAGGTTCATCAAATATTGTTGTAGATTGGAATGCAGCGTTAGAAAAAATAGCAGTCA
GTCATAAAAATGTATACATTGTACCGACATTCGATTTGTTTCAAAATCGCGGAAAAGAACTATTGTATTCAGATCATTTT
CATCCGAATGAAATAGGTTACTCATATATGGCAGATCGCTTAGTGCAAAATGTTGTAAGTAAGCTGAAACTACAAGGGGG
AGGGGCAAAATGA

Upstream 100 bases:

>100_bases
CACAATGAAGAGAGAAACAACATAAAGGGGAAAAATCGCTTTTCAAATTGCGGTTTGGTATAATTAGGAACAATCTAAGG
GAACGAAAAGGAGATGTCAT

Downstream 100 bases:

>100_bases
CGACAATCCTTTCAGTAAGGAATGTAAAAAAGGTTATCGGAAAGAAGACGCTTGTAGAAAATATTTCATTTGATGTTAAA
CAAGGGGAAGTGTTTGGTTT

Product: GDSL family lipase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MRAKLVKVILLLTVASFCLFAYGFLSGIHDVLNPKASNVVMKREEAQGKEKKKAGTLQVVSLGDSLTRGVGDKEGIGYVG
RMKEDLEKGDKTKVAITNLAVSGAKMADLLQQIESSGARYSIKRADLIVLTIGGNDLFPGWESLEKIDLETYRPDTEMFQ
NQARKIITEIRKLNADSPIFWLGLYNPFEDVEDLKGSSNIVVDWNAALEKIAVSHKNVYIVPTFDLFQNRGKELLYSDHF
HPNEIGYSYMADRLVQNVVSKLKLQGGGAK

Sequences:

>Translated_270_residues
MRAKLVKVILLLTVASFCLFAYGFLSGIHDVLNPKASNVVMKREEAQGKEKKKAGTLQVVSLGDSLTRGVGDKEGIGYVG
RMKEDLEKGDKTKVAITNLAVSGAKMADLLQQIESSGARYSIKRADLIVLTIGGNDLFPGWESLEKIDLETYRPDTEMFQ
NQARKIITEIRKLNADSPIFWLGLYNPFEDVEDLKGSSNIVVDWNAALEKIAVSHKNVYIVPTFDLFQNRGKELLYSDHF
HPNEIGYSYMADRLVQNVVSKLKLQGGGAK
>Mature_270_residues
MRAKLVKVILLLTVASFCLFAYGFLSGIHDVLNPKASNVVMKREEAQGKEKKKAGTLQVVSLGDSLTRGVGDKEGIGYVG
RMKEDLEKGDKTKVAITNLAVSGAKMADLLQQIESSGARYSIKRADLIVLTIGGNDLFPGWESLEKIDLETYRPDTEMFQ
NQARKIITEIRKLNADSPIFWLGLYNPFEDVEDLKGSSNIVVDWNAALEKIAVSHKNVYIVPTFDLFQNRGKELLYSDHF
HPNEIGYSYMADRLVQNVVSKLKLQGGGAK

Specific function: Unknown

COG id: COG2755

COG function: function code E; Lysophospholipase L1 and related esterases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013830
- InterPro:   IPR013831
- InterPro:   IPR001087 [H]

Pfam domain/function: PF00657 Lipase_GDSL [H]

EC number: NA

Molecular weight: Translated: 30000; Mature: 30000

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAKLVKVILLLTVASFCLFAYGFLSGIHDVLNPKASNVVMKREEAQGKEKKKAGTLQVV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEECHHHCCHHHHCCCCEEEE
SLGDSLTRGVGDKEGIGYVGRMKEDLEKGDKTKVAITNLAVSGAKMADLLQQIESSGARY
ECCCHHHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEEHHHHCCHHHHHHHHHHHCCCCEE
SIKRADLIVLTIGGNDLFPGWESLEKIDLETYRPDTEMFQNQARKIITEIRKLNADSPIF
EEEECCEEEEEECCCCCCCCHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEE
WLGLYNPFEDVEDLKGSSNIVVDWNAALEKIAVSHKNVYIVPTFDLFQNRGKELLYSDHF
EEECCCCHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCEEEEECHHHHHCCCCEEEECCCC
HPNEIGYSYMADRLVQNVVSKLKLQGGGAK
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRAKLVKVILLLTVASFCLFAYGFLSGIHDVLNPKASNVVMKREEAQGKEKKKAGTLQVV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEECHHHCCHHHHCCCCEEEE
SLGDSLTRGVGDKEGIGYVGRMKEDLEKGDKTKVAITNLAVSGAKMADLLQQIESSGARY
ECCCHHHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEEHHHHCCHHHHHHHHHHHCCCCEE
SIKRADLIVLTIGGNDLFPGWESLEKIDLETYRPDTEMFQNQARKIITEIRKLNADSPIF
EEEECCEEEEEECCCCCCCCHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEE
WLGLYNPFEDVEDLKGSSNIVVDWNAALEKIAVSHKNVYIVPTFDLFQNRGKELLYSDHF
EEECCCCHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCEEEEECHHHHHCCCCEEEECCCC
HPNEIGYSYMADRLVQNVVSKLKLQGGGAK
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 3145906 [H]