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The map label for this gene is lytR [H]

Identifier: 152977464

GI number: 152977464

Start: 3857909

End: 3858817

Strand: Reverse

Name: lytR [H]

Synonym: Bcer98_3796

Alternate gene names: 152977464

Gene position: 3858817-3857909 (Counterclockwise)

Preceding gene: 152977465

Following gene: 152977463

Centisome position: 94.42

GC content: 34.87

Gene sequence:

>909_bases
ATGAAAAAGAAAATTGTATTATGGATATTAGGAGTTATAGGAATCATGATTATAGGTGGAGGAATTTACGCCTACAACAT
TTATTCCTCAGTTTCAAAAACATTAGATGAAGTTCATAAACCTTTAAAACGTGATGAAAATAATAAGCAGGAAGAAAAAA
TTAGTAAGTCTAAGCCTGTTTCAATTTTATTACTAGGAGCAGATGAACGTGGAACTGATAAAGGACGTTCAGACTCCCTT
ATGGTTATTACGCTCAATCCACAAACGAACTCTATGAAAACGCTAAGTATCCCTCGTGATACGTACACAGAGATTGTGGG
AAAAGGAAAGAAAGATAAGATTAACCATGCCTATGCATTCGGTGGAGTAGACATGTCTGTTGCGACAGTAGAGAATTTCT
TAAATATTCCTATTAACTACTATATAGAAGTGAACATGGAAGGATTTAAGGATATTGTTGATGCGGTTGATGGGGTAGAT
GTAAATAATGATTTAGAATTTACACAAAACAAGCATCATTTTGCGAAGGGAAATATTCATTTAACAGGTGATGAGGCTTT
AGCATATACTCGTATGCGTAAGGCGGATTCACGTGGAGACTTTGGACGTCAAATGCGTCAGCGTCAAGTGATGCAAGCTG
TTATTAAAAAAGGAGCAAGTTTCTCTTCGCTTACAAACTACGGTGATGTATTAAATGCAATTCAAAAGAATGTGAAGACG
AATTTAACACAGGATCAAATGTTTGAGATGCAGAAAAACTATAAAGATTGTTTAAAAAATAGTGAAGAAATCCAAATCCC
AGGAGATGGTCACAAAGCAGCTGACGGCATTTGGTACTATTATGTTACAGATCACGCAAAACAAGAGTTAACAAATAAAT
TAAAAGCTCATCTTGAGTTAACACAATAA

Upstream 100 bases:

>100_bases
TTTGTGGCTGGAGAGGAATATCTTGAGGGTAAATGATAAAAAGGGAAATATATCGTATAATTAGGGAGTTATTGTTGGTT
AAAGAAAGAAAGGTGAAAGA

Downstream 100 bases:

>100_bases
TGTATAAACCCAACTCTCTTTGGTAGGAGTTGGGTTTATTTTCGCATAGTTTTGTATTACTATTATATGGTGTGAGATTA
GTAGACGAGGTGAATCGATG

Product: membrane-bound transcriptional regulator LytR

Products: NA

Alternate protein names: Membrane-bound protein lytR [H]

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MKKKIVLWILGVIGIMIIGGGIYAYNIYSSVSKTLDEVHKPLKRDENNKQEEKISKSKPVSILLLGADERGTDKGRSDSL
MVITLNPQTNSMKTLSIPRDTYTEIVGKGKKDKINHAYAFGGVDMSVATVENFLNIPINYYIEVNMEGFKDIVDAVDGVD
VNNDLEFTQNKHHFAKGNIHLTGDEALAYTRMRKADSRGDFGRQMRQRQVMQAVIKKGASFSSLTNYGDVLNAIQKNVKT
NLTQDQMFEMQKNYKDCLKNSEEIQIPGDGHKAADGIWYYYVTDHAKQELTNKLKAHLELTQ

Sequences:

>Translated_302_residues
MKKKIVLWILGVIGIMIIGGGIYAYNIYSSVSKTLDEVHKPLKRDENNKQEEKISKSKPVSILLLGADERGTDKGRSDSL
MVITLNPQTNSMKTLSIPRDTYTEIVGKGKKDKINHAYAFGGVDMSVATVENFLNIPINYYIEVNMEGFKDIVDAVDGVD
VNNDLEFTQNKHHFAKGNIHLTGDEALAYTRMRKADSRGDFGRQMRQRQVMQAVIKKGASFSSLTNYGDVLNAIQKNVKT
NLTQDQMFEMQKNYKDCLKNSEEIQIPGDGHKAADGIWYYYVTDHAKQELTNKLKAHLELTQ
>Mature_302_residues
MKKKIVLWILGVIGIMIIGGGIYAYNIYSSVSKTLDEVHKPLKRDENNKQEEKISKSKPVSILLLGADERGTDKGRSDSL
MVITLNPQTNSMKTLSIPRDTYTEIVGKGKKDKINHAYAFGGVDMSVATVENFLNIPINYYIEVNMEGFKDIVDAVDGVD
VNNDLEFTQNKHHFAKGNIHLTGDEALAYTRMRKADSRGDFGRQMRQRQVMQAVIKKGASFSSLTNYGDVLNAIQKNVKT
NLTQDQMFEMQKNYKDCLKNSEEIQIPGDGHKAADGIWYYYVTDHAKQELTNKLKAHLELTQ

Specific function: Attenuator role for operon expression [H]

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 34059; Mature: 34059

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKIVLWILGVIGIMIIGGGIYAYNIYSSVSKTLDEVHKPLKRDENNKQEEKISKSKPV
CCCCHHHHHHHHHHHHHHCCCHHEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCE
SILLLGADERGTDKGRSDSLMVITLNPQTNSMKTLSIPRDTYTEIVGKGKKDKINHAYAF
EEEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEECCHHHHHHHHCCCCCCCCCEEEEE
GGVDMSVATVENFLNIPINYYIEVNMEGFKDIVDAVDGVDVNNDLEFTQNKHHFAKGNIH
CCCCHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCEE
LTGDEALAYTRMRKADSRGDFGRQMRQRQVMQAVIKKGASFSSLTNYGDVLNAIQKNVKT
EECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
NLTQDQMFEMQKNYKDCLKNSEEIQIPGDGHKAADGIWYYYVTDHAKQELTNKLKAHLEL
CCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHEE
TQ
CC
>Mature Secondary Structure
MKKKIVLWILGVIGIMIIGGGIYAYNIYSSVSKTLDEVHKPLKRDENNKQEEKISKSKPV
CCCCHHHHHHHHHHHHHHCCCHHEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCE
SILLLGADERGTDKGRSDSLMVITLNPQTNSMKTLSIPRDTYTEIVGKGKKDKINHAYAF
EEEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEECCHHHHHHHHCCCCCCCCCEEEEE
GGVDMSVATVENFLNIPINYYIEVNMEGFKDIVDAVDGVDVNNDLEFTQNKHHFAKGNIH
CCCCHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCEE
LTGDEALAYTRMRKADSRGDFGRQMRQRQVMQAVIKKGASFSSLTNYGDVLNAIQKNVKT
EECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
NLTQDQMFEMQKNYKDCLKNSEEIQIPGDGHKAADGIWYYYVTDHAKQELTNKLKAHLEL
CCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHEE
TQ
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA