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The map label for this gene is yugI [H]

Identifier: 152977194

GI number: 152977194

Start: 3581494

End: 3581895

Strand: Reverse

Name: yugI [H]

Synonym: Bcer98_3511

Alternate gene names: 152977194

Gene position: 3581895-3581494 (Counterclockwise)

Preceding gene: 152977195

Following gene: 152977192

Centisome position: 87.64

GC content: 36.07

Gene sequence:

>402_bases
ATGCTTAGCTACGGAATAGTAGCAGGAAAAAATGGTAAACGTATGGGAGTGTTTCATATGTCAGAACAATATACAACAGG
AGTGATTGTAAAAGGGAAAGTGACTGGAATTCAAGATTACGGCGCATTTGTAGCATTGGATGATGAAACGCAAGGTCTTG
TGCATATATCTGAAATTACAAATGGGTATGTAAAAGATGTTCATGATTATTTAAAAATCGGAGATACAGTAGAAGTAAAG
GTACTTTCCGTTGATGAAGAGCACAAAAAGATGAGTTTATCATTAAAAGCAGCAAAAAGAAAACAAGGGAAAGTTCTTGT
GCCCAATCCATCCGCAAAAGGATTTCATACATTGCGTGAGAAGTTAACAGAGTGGATAGAAGAATCGGACATAACAAAGT
AA

Upstream 100 bases:

>100_bases
TGGTATAATTTACTAATATCAGGGGGTTCTTAGTTAAGATTTCGCTAAGCAATTATTTAAAGTTAATAGCATCTATCTAT
TCTTTATAAGTTCTCAGTGG

Downstream 100 bases:

>100_bases
AAGAGGAATGCTCATGAGCATTCCTCTTTTACTTTGTTATGATATATATTTAGCAAATATGATTGCAAGCAATCATATTC
GTATGTCGGATGAGAAGAAT

Product: general stress protein 13

Products: NA

Alternate protein names: GSP13 [H]

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MLSYGIVAGKNGKRMGVFHMSEQYTTGVIVKGKVTGIQDYGAFVALDDETQGLVHISEITNGYVKDVHDYLKIGDTVEVK
VLSVDEEHKKMSLSLKAAKRKQGKVLVPNPSAKGFHTLREKLTEWIEESDITK

Sequences:

>Translated_133_residues
MLSYGIVAGKNGKRMGVFHMSEQYTTGVIVKGKVTGIQDYGAFVALDDETQGLVHISEITNGYVKDVHDYLKIGDTVEVK
VLSVDEEHKKMSLSLKAAKRKQGKVLVPNPSAKGFHTLREKLTEWIEESDITK
>Mature_133_residues
MLSYGIVAGKNGKRMGVFHMSEQYTTGVIVKGKVTGIQDYGAFVALDDETQGLVHISEITNGYVKDVHDYLKIGDTVEVK
VLSVDEEHKKMSLSLKAAKRKQGKVLVPNPSAKGFHTLREKLTEWIEESDITK

Specific function: Unknown

COG id: COG1098

COG function: function code J; Predicted RNA binding protein (contains ribosomal protein S1 domain)

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Escherichia coli, GI87082262, Length=70, Percent_Identity=44.2857142857143, Blast_Score=69, Evalue=1e-13,
Organism=Escherichia coli, GI145693187, Length=80, Percent_Identity=45, Blast_Score=65, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17535281, Length=102, Percent_Identity=42.156862745098, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR000110
- InterPro:   IPR022967 [H]

Pfam domain/function: PF00575 S1 [H]

EC number: NA

Molecular weight: Translated: 14751; Mature: 14751

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSYGIVAGKNGKRMGVFHMSEQYTTGVIVKGKVTGIQDYGAFVALDDETQGLVHISEIT
CCCCCEEECCCCCEEEEEEECCCCCCEEEEEEEECCEECCCEEEEECCCCCCEEEEHHHC
NGYVKDVHDYLKIGDTVEVKVLSVDEEHKKMSLSLKAAKRKQGKVLVPNPSAKGFHTLRE
CCHHHHHHHHHHCCCEEEEEEEECCCCHHHEEEEEEEHHCCCCEEEECCCCCCHHHHHHH
KLTEWIEESDITK
HHHHHHHHCCCCC
>Mature Secondary Structure
MLSYGIVAGKNGKRMGVFHMSEQYTTGVIVKGKVTGIQDYGAFVALDDETQGLVHISEIT
CCCCCEEECCCCCEEEEEEECCCCCCEEEEEEEECCEECCCEEEEECCCCCCEEEEHHHC
NGYVKDVHDYLKIGDTVEVKVLSVDEEHKKMSLSLKAAKRKQGKVLVPNPSAKGFHTLRE
CCHHHHHHHHHHCCCEEEEEEEECCCCHHHEEEEEEEHHCCCCEEEECCCCCCHHHHHHH
KLTEWIEESDITK
HHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377; 9298659 [H]