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The map label for this gene is scpA

Identifier: 152976468

GI number: 152976468

Start: 2841242

End: 2841988

Strand: Reverse

Name: scpA

Synonym: Bcer98_2757

Alternate gene names: 152976468

Gene position: 2841988-2841242 (Counterclockwise)

Preceding gene: 152976470

Following gene: 152976467

Centisome position: 69.54

GC content: 34.54

Gene sequence:

>747_bases
GTGCAATATAATTTTAAAGTAGAGTCATTTGAAGGGCCTTTAGATTTATTATTACATTTAATTCATCGTTATGAAATCGA
TATATATAATATTCCTGTGGCAGAAATTACAGAACAGTATTTATCTTATATTCATACGATGAAAGAATTACAATTAGATG
TAGCGAGTGAGTATTTAGTGATGGCGGCAACGCTATTACAAATTAAAAGTAAAATGTTGTTACCGAAACAAGAAGAAGAT
GTACATGATAGTGGAGAGGACTTTATAGATGATCCTCGTCAAGAATTGATGGAGCGATTAATTGAATATAAAAAATATAA
GCAGGTGGCTGCAGAGTTAAAAGAAAGAGAGCAAGAAAGAGCGCAGCTATATACACGTCCACCGATTGATTTTACATCGT
TTCAGCAAGAAGAGGCGGCGAATCTGCCTCTTGATGTTACGCTATATGATATGTTAGCTGCGTTTCAAAAAATGATGCGT
CGCAAAAAATCCAAGCGTCCTGTAACAGCGCGGATTACTCGTCAAGAAATACCGATTGAACAGCGTATGACCGATATTTT
ACAAAAGTTAGAAACGCTAGGTGGTCGTCAAAGTTTTTACGATTTATTTGCTGATGAAGAGCGTGAAGTGATGGTTGTAA
CATTTTTAGCCATATTAGAGCTTATGAAACATCAACAAATTGTTATTGAGCAAGAACAAAACTTTGATGAAATCTTTTTG
TCGTGTGCAAATCATAATTCAAAATAA

Upstream 100 bases:

>100_bases
GCAAATATCTATTTTTCATTAAATTTCTTAAAAAGGTTGGATAGAACATAAGTATGCTCTATACTTATGTTGTTATAGAA
AAAATGTGGTGGGATGCTTT

Downstream 100 bases:

>100_bases
AATTTGAGCGTGAGAACAAATGAAGAAGATAAGACAAGTGATAGCAGTAAGACTTCCATCTTAAGATTCAGAGGGAAGCA
AGGAAGATAGGTAAGAGCTC

Product: segregation and condensation protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MQYNFKVESFEGPLDLLLHLIHRYEIDIYNIPVAEITEQYLSYIHTMKELQLDVASEYLVMAATLLQIKSKMLLPKQEED
VHDSGEDFIDDPRQELMERLIEYKKYKQVAAELKEREQERAQLYTRPPIDFTSFQQEEAANLPLDVTLYDMLAAFQKMMR
RKKSKRPVTARITRQEIPIEQRMTDILQKLETLGGRQSFYDLFADEEREVMVVTFLAILELMKHQQIVIEQEQNFDEIFL
SCANHNSK

Sequences:

>Translated_248_residues
MQYNFKVESFEGPLDLLLHLIHRYEIDIYNIPVAEITEQYLSYIHTMKELQLDVASEYLVMAATLLQIKSKMLLPKQEED
VHDSGEDFIDDPRQELMERLIEYKKYKQVAAELKEREQERAQLYTRPPIDFTSFQQEEAANLPLDVTLYDMLAAFQKMMR
RKKSKRPVTARITRQEIPIEQRMTDILQKLETLGGRQSFYDLFADEEREVMVVTFLAILELMKHQQIVIEQEQNFDEIFL
SCANHNSK
>Mature_248_residues
MQYNFKVESFEGPLDLLLHLIHRYEIDIYNIPVAEITEQYLSYIHTMKELQLDVASEYLVMAATLLQIKSKMLLPKQEED
VHDSGEDFIDDPRQELMERLIEYKKYKQVAAELKEREQERAQLYTRPPIDFTSFQQEEAANLPLDVTLYDMLAAFQKMMR
RKKSKRPVTARITRQEIPIEQRMTDILQKLETLGGRQSFYDLFADEEREVMVVTFLAILELMKHQQIVIEQEQNFDEIFL
SCANHNSK

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SCPA_BACCN (A7GS82)

Other databases:

- EMBL:   CP000764
- RefSeq:   YP_001375985.1
- STRING:   A7GS82
- EnsemblBacteria:   EBBACT00000037850
- GeneID:   5343955
- GenomeReviews:   CP000764_GR
- KEGG:   bcy:Bcer98_2757
- eggNOG:   COG1354
- GeneTree:   EBGT00050000002600
- HOGENOM:   HBG728383
- OMA:   IRKQNID
- ProtClustDB:   PRK00104
- BioCyc:   BCER315749:BCER98_2757-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01805
- InterPro:   IPR003768

Pfam domain/function: PF02616 ScpA_ScpB

EC number: NA

Molecular weight: Translated: 29416; Mature: 29416

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYNFKVESFEGPLDLLLHLIHRYEIDIYNIPVAEITEQYLSYIHTMKELQLDVASEYLV
CCCCCEECCCCCHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAATLLQIKSKMLLPKQEEDVHDSGEDFIDDPRQELMERLIEYKKYKQVAAELKEREQER
HHHHHHHHHHHHCCCCCHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQLYTRPPIDFTSFQQEEAANLPLDVTLYDMLAAFQKMMRRKKSKRPVTARITRQEIPIE
HHHHCCCCCCHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHCCHH
QRMTDILQKLETLGGRQSFYDLFADEEREVMVVTFLAILELMKHQQIVIEQEQNFDEIFL
HHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
SCANHNSK
HHHCCCCC
>Mature Secondary Structure
MQYNFKVESFEGPLDLLLHLIHRYEIDIYNIPVAEITEQYLSYIHTMKELQLDVASEYLV
CCCCCEECCCCCHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAATLLQIKSKMLLPKQEEDVHDSGEDFIDDPRQELMERLIEYKKYKQVAAELKEREQER
HHHHHHHHHHHHCCCCCHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQLYTRPPIDFTSFQQEEAANLPLDVTLYDMLAAFQKMMRRKKSKRPVTARITRQEIPIE
HHHHCCCCCCHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHCCHH
QRMTDILQKLETLGGRQSFYDLFADEEREVMVVTFLAILELMKHQQIVIEQEQNFDEIFL
HHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
SCANHNSK
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA