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The map label for this gene is scpB

Identifier: 152976467

GI number: 152976467

Start: 2840285

End: 2840857

Strand: Reverse

Name: scpB

Synonym: Bcer98_2756

Alternate gene names: 152976467

Gene position: 2840857-2840285 (Counterclockwise)

Preceding gene: 152976468

Following gene: 152976466

Centisome position: 69.51

GC content: 39.62

Gene sequence:

>573_bases
TTGGAAAGAAAAGAACAGATGGCAATTACTGAAGGGCTTCTTTTTGTCGCGGGTGATGAAGGAATATACCCAGAACAAAT
AGCAAAAGTACTTGAGATTGAAGAGGAAGATGTTATTAAAATCGTTGAAGAAATGCAAGAGAAATGGGAAGGTGAAGGGC
GTGGATTGCAAATTGTACAATTTGCGAAAGCATATCGCCTTGCTACTAAGAAAGAACATGCACCTTACTATCAAAAGTTA
ATGGACACGCCAACAGCTGCTTCGTTATCACAAGCAGCGCTTGAGACGCTAGCCATTGTTGCTTATCGTCAGCCGATTAC
GAGAATGGAAATGGAAGAAATTCGTGGTGTGAAAACAGAGAGAGCATTACAAACATTAGTTTCACATCTTCTTATCAAAG
AGGTTGGGCGCGCGGAAGGACCAGGACGCCCGATTTTATATGGGACAACCAAAGAGTTTTTAGATACATTTGGATTACAA
ACGTTAGATGACTTACCTGCTCTTTCAGAAGAAAATGAACAAATGAATGAAGCTGATTTATTCTTCGATTCGTTGCAAGA
ATTATCAAAATGA

Upstream 100 bases:

>100_bases
TGAAACAATAAAAAGAAAGACCAAACCGGAAGCACTTAACTGTGATTCGGTTTTTTTATGGGGATTTCGGATGAAATAAT
TTGAGGAAGGAGATTGTACG

Downstream 100 bases:

>100_bases
AAGCTTAGCACTTCGCTAAGCTTTTTTTGTATATGAAATACATAGCGTGTCATACTAAATGAAAAAAGGAGGCAAGTTAT
GAAAGGGGTACGGAGTATTC

Product: segregation and condensation protein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MERKEQMAITEGLLFVAGDEGIYPEQIAKVLEIEEEDVIKIVEEMQEKWEGEGRGLQIVQFAKAYRLATKKEHAPYYQKL
MDTPTAASLSQAALETLAIVAYRQPITRMEMEEIRGVKTERALQTLVSHLLIKEVGRAEGPGRPILYGTTKEFLDTFGLQ
TLDDLPALSEENEQMNEADLFFDSLQELSK

Sequences:

>Translated_190_residues
MERKEQMAITEGLLFVAGDEGIYPEQIAKVLEIEEEDVIKIVEEMQEKWEGEGRGLQIVQFAKAYRLATKKEHAPYYQKL
MDTPTAASLSQAALETLAIVAYRQPITRMEMEEIRGVKTERALQTLVSHLLIKEVGRAEGPGRPILYGTTKEFLDTFGLQ
TLDDLPALSEENEQMNEADLFFDSLQELSK
>Mature_190_residues
MERKEQMAITEGLLFVAGDEGIYPEQIAKVLEIEEEDVIKIVEEMQEKWEGEGRGLQIVQFAKAYRLATKKEHAPYYQKL
MDTPTAASLSQAALETLAIVAYRQPITRMEMEEIRGVKTERALQTLVSHLLIKEVGRAEGPGRPILYGTTKEFLDTFGLQ
TLDDLPALSEENEQMNEADLFFDSLQELSK

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpA that pull DNA away from mid-cell into both cell halves

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SCPB_BACCN (A7GS81)

Other databases:

- EMBL:   CP000764
- RefSeq:   YP_001375984.1
- ProteinModelPortal:   A7GS81
- SMR:   A7GS81
- STRING:   A7GS81
- EnsemblBacteria:   EBBACT00000038541
- GeneID:   5344304
- GenomeReviews:   CP000764_GR
- KEGG:   bcy:Bcer98_2756
- eggNOG:   COG1386
- GeneTree:   EBGT00050000002500
- HOGENOM:   HBG752450
- OMA:   NILEEMQ
- ProtClustDB:   PRK00135
- BioCyc:   BCER315749:BCER98_2756-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01804
- InterPro:   IPR005234
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10
- PIRSF:   PIRSF019345
- TIGRFAMs:   TIGR00281

Pfam domain/function: PF04079 DUF387

EC number: NA

Molecular weight: Translated: 21553; Mature: 21553

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERKEQMAITEGLLFVAGDEGIYPEQIAKVLEIEEEDVIKIVEEMQEKWEGEGRGLQIVQ
CCHHHHHHHHHCEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHH
FAKAYRLATKKEHAPYYQKLMDTPTAASLSQAALETLAIVAYRQPITRMEMEEIRGVKTE
HHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHH
RALQTLVSHLLIKEVGRAEGPGRPILYGTTKEFLDTFGLQTLDDLPALSEENEQMNEADL
HHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHH
FFDSLQELSK
HHHHHHHHCC
>Mature Secondary Structure
MERKEQMAITEGLLFVAGDEGIYPEQIAKVLEIEEEDVIKIVEEMQEKWEGEGRGLQIVQ
CCHHHHHHHHHCEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHH
FAKAYRLATKKEHAPYYQKLMDTPTAASLSQAALETLAIVAYRQPITRMEMEEIRGVKTE
HHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHH
RALQTLVSHLLIKEVGRAEGPGRPILYGTTKEFLDTFGLQTLDDLPALSEENEQMNEADL
HHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHH
FFDSLQELSK
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA