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The map label for this gene is yvoA [H]

Identifier: 152976463

GI number: 152976463

Start: 2836513

End: 2837190

Strand: Reverse

Name: yvoA [H]

Synonym: Bcer98_2752

Alternate gene names: 152976463

Gene position: 2837190-2836513 (Counterclockwise)

Preceding gene: 152976464

Following gene: 152976461

Centisome position: 69.42

GC content: 36.43

Gene sequence:

>678_bases
GTGAAACAGCTAATTGAGGACGGTGAATGGAAGCCGGGAGATAAAATTCCATCTGAAAATGAACTTTGTGATAAGTTTGA
AGTAAGTCGTATGACAATTAGACAGGCAATTAATAACTTAGTGGAACAAGGATATTTATATCGAAAACGTGGAATTGGAA
CGTTTGTTCAACTTCCAAAAGTGGAGCAAAAACTGCAAGGGATGACGGGATTTACTGAAGATATGTTATCCCGTGGAATG
AAACCGAGCAGTCAATTATTAAGTTTTCAGCTAGTTCCTGCTACTGCTAAAATAGCAGAGCGACTTAGAATACAAGAGGG
AGAGTCGATTTATGAAGTGAGGCGTATTCGCTTAGCTGATGATGAACCGATTGCTTTTGAGACAACATATTTGTCGCCAA
CTCTTGTAAAAGATATTAACGAAGAAATTTTGCAACAATCTTTATACGAACATTTAGAGAAAAAATTAGGCTTTAAACTT
GTTCGTGCTACGCAAACAATTGAAGCTTCAATTGCAACAGATGATGAAGCTGAACATCTGCACATACCTAAAAAAGCACC
TGTGCTTGTAATGAGACAATGGTCATATGCAGAAGGAGAATTACCATTAGAGTACGTAAAATGCATTTATCGTGGTGATC
GTTATAAGTTTATTACGAATATTTCACGAAATAAGTAA

Upstream 100 bases:

>100_bases
ATCGCTGATCAAGAAGCTCTATCTTTATGCAGTGAGGCGATTGCTGATGAACATCGACAAGTATTCACCATTTCCGATCT
ATTATCAGATTCAAGAGTGG

Downstream 100 bases:

>100_bases
TTTTACTTTGTGCAATATAAAAATACGACTCGTCCCTACTTGGAACGAGTCGTATTTTTATGTTGTGTAGCATTATAGTG
TAAAACATGTTTTACAGCAT

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MKQLIEDGEWKPGDKIPSENELCDKFEVSRMTIRQAINNLVEQGYLYRKRGIGTFVQLPKVEQKLQGMTGFTEDMLSRGM
KPSSQLLSFQLVPATAKIAERLRIQEGESIYEVRRIRLADDEPIAFETTYLSPTLVKDINEEILQQSLYEHLEKKLGFKL
VRATQTIEASIATDDEAEHLHIPKKAPVLVMRQWSYAEGELPLEYVKCIYRGDRYKFITNISRNK

Sequences:

>Translated_225_residues
MKQLIEDGEWKPGDKIPSENELCDKFEVSRMTIRQAINNLVEQGYLYRKRGIGTFVQLPKVEQKLQGMTGFTEDMLSRGM
KPSSQLLSFQLVPATAKIAERLRIQEGESIYEVRRIRLADDEPIAFETTYLSPTLVKDINEEILQQSLYEHLEKKLGFKL
VRATQTIEASIATDDEAEHLHIPKKAPVLVMRQWSYAEGELPLEYVKCIYRGDRYKFITNISRNK
>Mature_225_residues
MKQLIEDGEWKPGDKIPSENELCDKFEVSRMTIRQAINNLVEQGYLYRKRGIGTFVQLPKVEQKLQGMTGFTEDMLSRGM
KPSSQLLSFQLVPATAKIAERLRIQEGESIYEVRRIRLADDEPIAFETTYLSPTLVKDINEEILQQSLYEHLEKKLGFKL
VRATQTIEASIATDDEAEHLHIPKKAPVLVMRQWSYAEGELPLEYVKCIYRGDRYKFITNISRNK

Specific function: Acts as a weak repressor of yflG expression [H]

COG id: COG2188

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790540, Length=210, Percent_Identity=30.4761904761905, Blast_Score=118, Evalue=4e-28,
Organism=Escherichia coli, GI1786950, Length=217, Percent_Identity=30.4147465437788, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI1790118, Length=219, Percent_Identity=28.7671232876712, Blast_Score=111, Evalue=5e-26,
Organism=Escherichia coli, GI87082252, Length=221, Percent_Identity=28.9592760180996, Blast_Score=108, Evalue=2e-25,
Organism=Escherichia coli, GI1788418, Length=220, Percent_Identity=27.2727272727273, Blast_Score=102, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000524
- InterPro:   IPR011663
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00392 GntR; PF07702 UTRA [H]

EC number: NA

Molecular weight: Translated: 26041; Mature: 26041

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQLIEDGEWKPGDKIPSENELCDKFEVSRMTIRQAINNLVEQGYLYRKRGIGTFVQLPK
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCHHHCCHH
VEQKLQGMTGFTEDMLSRGMKPSSQLLSFQLVPATAKIAERLRIQEGESIYEVRRIRLAD
HHHHHCCCCCCHHHHHHCCCCCHHHHHEEEECCHHHHHHHHHHHCCCCHHHHHHHHHCCC
DEPIAFETTYLSPTLVKDINEEILQQSLYEHLEKKLGFKLVRATQTIEASIATDDEAEHL
CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
HIPKKAPVLVMRQWSYAEGELPLEYVKCIYRGDRYKFITNISRNK
ECCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCC
>Mature Secondary Structure
MKQLIEDGEWKPGDKIPSENELCDKFEVSRMTIRQAINNLVEQGYLYRKRGIGTFVQLPK
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCHHHCCHH
VEQKLQGMTGFTEDMLSRGMKPSSQLLSFQLVPATAKIAERLRIQEGESIYEVRRIRLAD
HHHHHCCCCCCHHHHHHCCCCCHHHHHEEEECCHHHHHHHHHHHCCCCHHHHHHHHHCCC
DEPIAFETTYLSPTLVKDINEEILQQSLYEHLEKKLGFKLVRATQTIEASIATDDEAEHL
CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
HIPKKAPVLVMRQWSYAEGELPLEYVKCIYRGDRYKFITNISRNK
ECCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]