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The map label for this gene is frr [H]

Identifier: 152976190

GI number: 152976190

Start: 2574556

End: 2575113

Strand: Reverse

Name: frr [H]

Synonym: Bcer98_2476

Alternate gene names: 152976190

Gene position: 2575113-2574556 (Counterclockwise)

Preceding gene: 152976191

Following gene: 152976189

Centisome position: 63.01

GC content: 36.92

Gene sequence:

>558_bases
ATGGGACAACAAGTAATTAAATCGTCAACTGAAAAAATGGAAAAAGCAGTTGCTGCTTATTCTCGTGAATTAGCAACAGT
TCGTGCTGGTCGTGCTAGCGCGTCTATACTAGACAAAGTACAAGTGGATTACTACGGTGCACCAACACCAGTTGTGCAAT
TAGCGAACATCACTGTTCCAGAAGCACGTCTACTTGTTATTCAACCTTATGACAAAACTTCTATTGGTGATATTGAAAAA
GCAATCTTAAAAGCAGATTTAGGATTAAATCCTTCTAACGATGGGTCAGTAATTCGTATTGCATTCCCTGCATTAACAGA
AGAGCGCCGTCGTGAACTTGTTAAAGTTGTAAAGAAATATGCTGAAGATGCAAAAGTTGCTATTCGTAACGTTCGTCGTG
ACGGTAACGATGAACTTAAAAAGCTTGAAAAAGCTGGTGAAATGACAGAAGATGATTTAAGAGGATATACAGAAGATATC
CAAAAAGAAACAGATAAATATATTGCAAAAGTTGACGAAATCGCAAAAAACAAAGAACAAGAAATCATGGAAGTGTAA

Upstream 100 bases:

>100_bases
ACGATATTCCATTAATTGTATTCTCGATTATGGAAAAAGGAAATATTAAACGTGCTGTTTTAGGCGAAAATATCGGAACA
ATTGTAAGGGGGAAATAACT

Downstream 100 bases:

>100_bases
TAGCGGTACCTTCGCAAATATGACCCTCTTCTTAAGGGGGTCTTTTTACACTTTTTGGCATACGTCTGCTTGTTGGAGGG
TATGAATGATGTTAAAAAAG

Product: ribosome recycling factor

Products: NA

Alternate protein names: RRF; Ribosome-releasing factor [H]

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MGQQVIKSSTEKMEKAVAAYSRELATVRAGRASASILDKVQVDYYGAPTPVVQLANITVPEARLLVIQPYDKTSIGDIEK
AILKADLGLNPSNDGSVIRIAFPALTEERRRELVKVVKKYAEDAKVAIRNVRRDGNDELKKLEKAGEMTEDDLRGYTEDI
QKETDKYIAKVDEIAKNKEQEIMEV

Sequences:

>Translated_185_residues
MGQQVIKSSTEKMEKAVAAYSRELATVRAGRASASILDKVQVDYYGAPTPVVQLANITVPEARLLVIQPYDKTSIGDIEK
AILKADLGLNPSNDGSVIRIAFPALTEERRRELVKVVKKYAEDAKVAIRNVRRDGNDELKKLEKAGEMTEDDLRGYTEDI
QKETDKYIAKVDEIAKNKEQEIMEV
>Mature_184_residues
GQQVIKSSTEKMEKAVAAYSRELATVRAGRASASILDKVQVDYYGAPTPVVQLANITVPEARLLVIQPYDKTSIGDIEKA
ILKADLGLNPSNDGSVIRIAFPALTEERRRELVKVVKKYAEDAKVAIRNVRRDGNDELKKLEKAGEMTEDDLRGYTEDIQ
KETDKYIAKVDEIAKNKEQEIMEV

Specific function: Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another [H]

COG id: COG0233

COG function: function code J; Ribosome recycling factor

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RRF family [H]

Homologues:

Organism=Escherichia coli, GI1786368, Length=184, Percent_Identity=46.7391304347826, Blast_Score=172, Evalue=1e-44,
Organism=Drosophila melanogaster, GI24661488, Length=174, Percent_Identity=25.8620689655172, Blast_Score=68, Evalue=3e-12,

Paralogues:

None

Copy number: 840 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002661
- InterPro:   IPR015998 [H]

Pfam domain/function: PF01765 RRF [H]

EC number: NA

Molecular weight: Translated: 20653; Mature: 20522

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQQVIKSSTEKMEKAVAAYSRELATVRAGRASASILDKVQVDYYGAPTPVVQLANITVP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCC
EARLLVIQPYDKTSIGDIEKAILKADLGLNPSNDGSVIRIAFPALTEERRRELVKVVKKY
CCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHH
AEDAKVAIRNVRRDGNDELKKLEKAGEMTEDDLRGYTEDIQKETDKYIAKVDEIAKNKEQ
HHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
EIMEV
HHHCC
>Mature Secondary Structure 
GQQVIKSSTEKMEKAVAAYSRELATVRAGRASASILDKVQVDYYGAPTPVVQLANITVP
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCC
EARLLVIQPYDKTSIGDIEKAILKADLGLNPSNDGSVIRIAFPALTEERRRELVKVVKKY
CCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHH
AEDAKVAIRNVRRDGNDELKKLEKAGEMTEDDLRGYTEDIQKETDKYIAKVDEIAKNKEQ
HHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
EIMEV
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA