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The map label for this gene is ynbB [H]

Identifier: 152976099

GI number: 152976099

Start: 2469264

End: 2470535

Strand: Reverse

Name: ynbB [H]

Synonym: Bcer98_2383

Alternate gene names: 152976099

Gene position: 2470535-2469264 (Counterclockwise)

Preceding gene: 152976100

Following gene: 152976098

Centisome position: 60.45

GC content: 38.84

Gene sequence:

>1272_bases
ATGTTTGATCGTTTGAAAAATGGAGAAAAACTTGCCCCAATTGTAAAAGAAATAGAAAGTCAAATTCAAGACATACATAA
ACGTGTGGATGAAGTAATTGAAAGCAATCAATTTCGTGTATTAGAAAGTTTTCGTAAACATAAAATTAGTGATTCACACT
TTATCCCGACAACAGGGTATGGTTATGATGATATTGGGCGAGATACGTTAGAAAAAGTGTATGCAGATGTATTTGGAGCG
GAAGCTGGACTTGTTCGTCCGCAAATTATTTCCGGTACGCACGCAATTTCGACAGCTTTATTTGGTATATTACGCCCAGG
TGATGAATTATTATATATTACAGGAAAGCCATATGATACGTTAGAAGAGATTGTTGGTGTACGTGGTAAAGGTGTTGGTT
CTTTTAAAGAATATAACATTGGATATAATGCAGTTCCATTAACAAGTGAAGGGCGCGTTGATTTTAAAGCAGTGGAAGCT
GCGATTCATGAAAAAACAAAAATGATTGGTATTCAGCGTTCAAAAGGATATGCAACTCGTCCATCATTTACAATTGCAGA
AGTGAAAGAAATGATTTCATTTGTAAAGGAAATCAAACCAGATGTTGTTGTATTTGTAGACAACTGTTACGGTGAATTTA
TTGAAGAGCAAGAGCCATGTCATGTTGGCGCGGACTTAATGGCTGGCTCTCTTATTAAAAATCCAGGCGGCGGTATTGTA
AAAACAGGCGGCTATATTGTCGGAAAAGAAGAATATGTAGAAGCTTGCGCTTATCGCCTGACATCTCCAGGTATTGGAGC
GGAAGCAGGTGCGTCTTTATATAGTTTGCAAGAGATGTATCAAGGCTTCTTCTTAGCGCCGCACGTTGCTGGTCAAGCGC
TAAAGGGAGCGATTTTTACCGCGGCCTTTTTACAAAGGTTAGGGATGAATACATCGCCAACTTGGGATGCTCCGAGAACG
GATTTAATTCAATCTGTTCAATTTGATGATAAAGAGCGTATGATCGCGTTTTGTCAAGCGATTCAATATGCATCCCCTAT
TAATTCGCACTTTACACCGTATCCGAATTATATGCCTGGTTATGAAGATGATGTGATTATGGCTGCGGGTACGTTTATTC
AAGGTGCGAGTATTGAGTTATCGGCAGATGGTCCGATTCGTCCGCCATATGTTGCTTATGTGCAAGGTGGTTTAACATAT
TCTCATGTTAAGATTGCGATTTGTTCTGCAATTGATGCGCTAATTGAAAAAAACTTATTAACGATTTCTTGA

Upstream 100 bases:

>100_bases
ACTGAATTGTTATACGAGTGTACAGGGTATATATTTACTCATTCTGCACTCAACGAATCACTGCAAAGATTTTTAGTGGG
AAAAGGAGAATAGAAGCATC

Downstream 100 bases:

>100_bases
GGGGAAGCTGTCGATTTTTTCGGCAGCTTTTTTAGTTTGTTTTTCGATTTTAAAAAAGAATAAAAAAATTTACAAAAAAA
TCATGTAAGAAAAGCTAACA

Product: aluminium resistance family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MFDRLKNGEKLAPIVKEIESQIQDIHKRVDEVIESNQFRVLESFRKHKISDSHFIPTTGYGYDDIGRDTLEKVYADVFGA
EAGLVRPQIISGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNAVPLTSEGRVDFKAVEA
AIHEKTKMIGIQRSKGYATRPSFTIAEVKEMISFVKEIKPDVVVFVDNCYGEFIEEQEPCHVGADLMAGSLIKNPGGGIV
KTGGYIVGKEEYVEACAYRLTSPGIGAEAGASLYSLQEMYQGFFLAPHVAGQALKGAIFTAAFLQRLGMNTSPTWDAPRT
DLIQSVQFDDKERMIAFCQAIQYASPINSHFTPYPNYMPGYEDDVIMAAGTFIQGASIELSADGPIRPPYVAYVQGGLTY
SHVKIAICSAIDALIEKNLLTIS

Sequences:

>Translated_423_residues
MFDRLKNGEKLAPIVKEIESQIQDIHKRVDEVIESNQFRVLESFRKHKISDSHFIPTTGYGYDDIGRDTLEKVYADVFGA
EAGLVRPQIISGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNAVPLTSEGRVDFKAVEA
AIHEKTKMIGIQRSKGYATRPSFTIAEVKEMISFVKEIKPDVVVFVDNCYGEFIEEQEPCHVGADLMAGSLIKNPGGGIV
KTGGYIVGKEEYVEACAYRLTSPGIGAEAGASLYSLQEMYQGFFLAPHVAGQALKGAIFTAAFLQRLGMNTSPTWDAPRT
DLIQSVQFDDKERMIAFCQAIQYASPINSHFTPYPNYMPGYEDDVIMAAGTFIQGASIELSADGPIRPPYVAYVQGGLTY
SHVKIAICSAIDALIEKNLLTIS
>Mature_423_residues
MFDRLKNGEKLAPIVKEIESQIQDIHKRVDEVIESNQFRVLESFRKHKISDSHFIPTTGYGYDDIGRDTLEKVYADVFGA
EAGLVRPQIISGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNAVPLTSEGRVDFKAVEA
AIHEKTKMIGIQRSKGYATRPSFTIAEVKEMISFVKEIKPDVVVFVDNCYGEFIEEQEPCHVGADLMAGSLIKNPGGGIV
KTGGYIVGKEEYVEACAYRLTSPGIGAEAGASLYSLQEMYQGFFLAPHVAGQALKGAIFTAAFLQRLGMNTSPTWDAPRT
DLIQSVQFDDKERMIAFCQAIQYASPINSHFTPYPNYMPGYEDDVIMAAGTFIQGASIELSADGPIRPPYVAYVQGGLTY
SHVKIAICSAIDALIEKNLLTIS

Specific function: Unknown

COG id: COG4100

COG function: function code P; Cystathionine beta-lyase family protein involved in aluminum resistance

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009651
- InterPro:   IPR015424
- InterPro:   IPR015421 [H]

Pfam domain/function: PF06838 Alum_res [H]

EC number: NA

Molecular weight: Translated: 46401; Mature: 46401

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDRLKNGEKLAPIVKEIESQIQDIHKRVDEVIESNQFRVLESFRKHKISDSHFIPTTGY
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCC
GYDDIGRDTLEKVYADVFGAEAGLVRPQIISGTHAISTALFGILRPGDELLYITGKPYDT
CCHHCCHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHCCCCCCEEEEECCCHHH
LEEIVGVRGKGVGSFKEYNIGYNAVPLTSEGRVDFKAVEAAIHEKTKMIGIQRSKGYATR
HHHHHCCCCCCCCCCHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCC
PSFTIAEVKEMISFVKEIKPDVVVFVDNCYGEFIEEQEPCHVGADLMAGSLIKNPGGGIV
CCCCHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEE
KTGGYIVGKEEYVEACAYRLTSPGIGAEAGASLYSLQEMYQGFFLAPHVAGQALKGAIFT
ECCCEEECHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHH
AAFLQRLGMNTSPTWDAPRTDLIQSVQFDDKERMIAFCQAIQYASPINSHFTPYPNYMPG
HHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
YEDDVIMAAGTFIQGASIELSADGPIRPPYVAYVQGGLTYSHVKIAICSAIDALIEKNLL
CCCCEEEEECCEEECCEEEEECCCCCCCCEEEEEECCCEEHHHHHHHHHHHHHHHHCCCE
TIS
ECC
>Mature Secondary Structure
MFDRLKNGEKLAPIVKEIESQIQDIHKRVDEVIESNQFRVLESFRKHKISDSHFIPTTGY
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCC
GYDDIGRDTLEKVYADVFGAEAGLVRPQIISGTHAISTALFGILRPGDELLYITGKPYDT
CCHHCCHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHCCCCCCEEEEECCCHHH
LEEIVGVRGKGVGSFKEYNIGYNAVPLTSEGRVDFKAVEAAIHEKTKMIGIQRSKGYATR
HHHHHCCCCCCCCCCHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCC
PSFTIAEVKEMISFVKEIKPDVVVFVDNCYGEFIEEQEPCHVGADLMAGSLIKNPGGGIV
CCCCHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEE
KTGGYIVGKEEYVEACAYRLTSPGIGAEAGASLYSLQEMYQGFFLAPHVAGQALKGAIFT
ECCCEEECHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHH
AAFLQRLGMNTSPTWDAPRTDLIQSVQFDDKERMIAFCQAIQYASPINSHFTPYPNYMPG
HHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
YEDDVIMAAGTFIQGASIELSADGPIRPPYVAYVQGGLTYSHVKIAICSAIDALIEKNLL
CCCCEEEEECCEEECCEEEEECCCCCCCCEEEEEECCCEEHHHHHHHHHHHHHHHHCCCE
TIS
ECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]