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The map label for this gene is yqjN [H]

Identifier: 152976047

GI number: 152976047

Start: 2416389

End: 2418029

Strand: Reverse

Name: yqjN [H]

Synonym: Bcer98_2323

Alternate gene names: 152976047

Gene position: 2418029-2416389 (Counterclockwise)

Preceding gene: 152976048

Following gene: 152976044

Centisome position: 59.16

GC content: 35.65

Gene sequence:

>1641_bases
ATGGCAAAATGGCAGACAAAAGAAGAGTTAGTACAATTATTGAGTAATCTTGTTGAAATTCCTAGTATTACTGGATCAAA
AGCTGAAACAGTATTACCAGACTTTGTTGTTGAACAACTATCTAGTCTATCGTACTTCAAGGAGAATCCTAGTCATTTAG
AAAAACATCCAACAGGGGATGGACGCTATTTTATTACAGCTTTAGTAAAGAAAGAAAAACATTTGAAAAATACAATTGTT
TTAGTGAGTCACTTTGATGTTGTAGATGTAGAGGACTATGGCATATGGAAAGAATATGCATTTCAACCTCAAAAACTCAC
ATCTATGTTTTATTCACATAAAGATGAAGTGCCATATCCTGTTCAGCAAGATATAGAACAAGGTGATTGGCTATTTGGTA
GAGGGATAATGGATATGAAGTGCGGTTTAACTTTGCATATGGCAATGGTTGAACAAGCTTGTGAAGGGAGTTTTGATGGG
AATATTCTTTTATTAACTGTCCCAGATGAAGAGGTGAACTCTGTAGGAATGAGAACCGCTGTTCCAAAATTATTAGAGCT
TGCAAAAGAACACGATCTTCAGTATAAAGCAGTCCTCAATTCTGAACCAATGTTTACATGTTATCCAGGAGATCAAAATA
AATATATTTATACAGGATCTATTGGAAAAGTATTACCTGGTTTTCTTTGTTATGGAAAGGAAACGCATGTAGGAGAACCG
TTTGCGGGATTAAATGCGAATTATATGGCTTCATTATTAACTGCGGAATTGGAATTAAATACGGAACTTTGTGATATTGT
AGAAGGCGAAGCAAGTCCACCTCCGACAAATTTATTGCAAAGGGATTTAAAAGAAGAGTATTCGGTACAAATTCCTCATC
GTGCAGTGACATTGTTTAATTTATTTTTATTAGAAAAAACGATGCCAGATGTTGTTTCGTTGCTATATAAAAAGGCAATG
GGAGTAGCGGAGAAAATCGAGGAAACGTATGCGAAACAGGCATATCATTTTTCTAAATATAATCCGTTTATACCGCCCAG
TCTAAAAGTGAATGTACTCACTTATGAGGAATTGGTTGCTTATGCCATTGAACAACATGGAAAAGAAGCAATTGATAAAA
TGCAAGCGATTGTTTTGGAAAATCGCGGGGGAAAAGATGACCGTGCAATTACGATTGAACTTGTGGATAGGTTAGCCATT
TTATGTAAAGAAAAAGGGCCAATGATCATACTGTTCTTTGCGCCACCTTACTATCCGGCTGTAAGTTCTCGTAATAATCC
ATTCATTCAAAGCGCAGTAGCAGAACTAGAAAGTTATGGACATGACCAACATGGAGTTACATTTAAAACTCAAAATTATT
TTGGCGGAATTTCTGACTTAAGTTATGTAGGATTACAATATCCAGTTGAAGCAATGACTTCACTTGTAGAAAATATGCCT
TTATGGAATAAAGGGTATTCGATTCCACTACAAGAATTAGCAGAGTTTAATGTTCCTGTATTAAATGTTGGACCTGTAGG
AAAAGATGCGCACCAGTGGACTGAGCGTTTAGATGTAGATTATGCGTTTGAAACATTATTGGATATGTTACCAGTATGTA
TTGATAGATTACTCGCTAGGAATCAAATGTCACAAGTATAG

Upstream 100 bases:

>100_bases
TAAAAATCGGCGGAACAGGAAAGGAATAGGAGAATATTCTGTCGTTTTTTATTCATATATTGGAATTGATTTTCATAATA
CGGAAAACAGGGGGATATAT

Downstream 100 bases:

>100_bases
TTGAAAAGTAGAAAAAAGCTAGCAATTGTAACACAATTGCTAGCTTGTTCTCATTTTTTAATGTATCCAAGCCAAGAAAA
GCGGTACAATGACTAAACTA

Product: peptidase M20

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 546; Mature: 545

Protein sequence:

>546_residues
MAKWQTKEELVQLLSNLVEIPSITGSKAETVLPDFVVEQLSSLSYFKENPSHLEKHPTGDGRYFITALVKKEKHLKNTIV
LVSHFDVVDVEDYGIWKEYAFQPQKLTSMFYSHKDEVPYPVQQDIEQGDWLFGRGIMDMKCGLTLHMAMVEQACEGSFDG
NILLLTVPDEEVNSVGMRTAVPKLLELAKEHDLQYKAVLNSEPMFTCYPGDQNKYIYTGSIGKVLPGFLCYGKETHVGEP
FAGLNANYMASLLTAELELNTELCDIVEGEASPPPTNLLQRDLKEEYSVQIPHRAVTLFNLFLLEKTMPDVVSLLYKKAM
GVAEKIEETYAKQAYHFSKYNPFIPPSLKVNVLTYEELVAYAIEQHGKEAIDKMQAIVLENRGGKDDRAITIELVDRLAI
LCKEKGPMIILFFAPPYYPAVSSRNNPFIQSAVAELESYGHDQHGVTFKTQNYFGGISDLSYVGLQYPVEAMTSLVENMP
LWNKGYSIPLQELAEFNVPVLNVGPVGKDAHQWTERLDVDYAFETLLDMLPVCIDRLLARNQMSQV

Sequences:

>Translated_546_residues
MAKWQTKEELVQLLSNLVEIPSITGSKAETVLPDFVVEQLSSLSYFKENPSHLEKHPTGDGRYFITALVKKEKHLKNTIV
LVSHFDVVDVEDYGIWKEYAFQPQKLTSMFYSHKDEVPYPVQQDIEQGDWLFGRGIMDMKCGLTLHMAMVEQACEGSFDG
NILLLTVPDEEVNSVGMRTAVPKLLELAKEHDLQYKAVLNSEPMFTCYPGDQNKYIYTGSIGKVLPGFLCYGKETHVGEP
FAGLNANYMASLLTAELELNTELCDIVEGEASPPPTNLLQRDLKEEYSVQIPHRAVTLFNLFLLEKTMPDVVSLLYKKAM
GVAEKIEETYAKQAYHFSKYNPFIPPSLKVNVLTYEELVAYAIEQHGKEAIDKMQAIVLENRGGKDDRAITIELVDRLAI
LCKEKGPMIILFFAPPYYPAVSSRNNPFIQSAVAELESYGHDQHGVTFKTQNYFGGISDLSYVGLQYPVEAMTSLVENMP
LWNKGYSIPLQELAEFNVPVLNVGPVGKDAHQWTERLDVDYAFETLLDMLPVCIDRLLARNQMSQV
>Mature_545_residues
AKWQTKEELVQLLSNLVEIPSITGSKAETVLPDFVVEQLSSLSYFKENPSHLEKHPTGDGRYFITALVKKEKHLKNTIVL
VSHFDVVDVEDYGIWKEYAFQPQKLTSMFYSHKDEVPYPVQQDIEQGDWLFGRGIMDMKCGLTLHMAMVEQACEGSFDGN
ILLLTVPDEEVNSVGMRTAVPKLLELAKEHDLQYKAVLNSEPMFTCYPGDQNKYIYTGSIGKVLPGFLCYGKETHVGEPF
AGLNANYMASLLTAELELNTELCDIVEGEASPPPTNLLQRDLKEEYSVQIPHRAVTLFNLFLLEKTMPDVVSLLYKKAMG
VAEKIEETYAKQAYHFSKYNPFIPPSLKVNVLTYEELVAYAIEQHGKEAIDKMQAIVLENRGGKDDRAITIELVDRLAIL
CKEKGPMIILFFAPPYYPAVSSRNNPFIQSAVAELESYGHDQHGVTFKTQNYFGGISDLSYVGLQYPVEAMTSLVENMPL
WNKGYSIPLQELAEFNVPVLNVGPVGKDAHQWTERLDVDYAFETLLDMLPVCIDRLLARNQMSQV

Specific function: Unknown

COG id: COG4187

COG function: function code E; Arginine degradation protein (predicted deacylase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis rocB [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002933
- InterPro:   IPR012166 [H]

Pfam domain/function: PF01546 Peptidase_M20 [H]

EC number: NA

Molecular weight: Translated: 61624; Mature: 61493

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKWQTKEELVQLLSNLVEIPSITGSKAETVLPDFVVEQLSSLSYFKENPSHLEKHPTGD
CCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCC
GRYFITALVKKEKHLKNTIVLVSHFDVVDVEDYGIWKEYAFQPQKLTSMFYSHKDEVPYP
CCEEHHHHHHHHHHHCCEEEEEEECCEEECCCCCCHHHHCCCHHHHHHHHHHCCCCCCCC
VQQDIEQGDWLFGRGIMDMKCGLTLHMAMVEQACEGSFDGNILLLTVPDEEVNSVGMRTA
HHHHHCCCCEEECCCCEEHHCCHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHCCHHHH
VPKLLELAKEHDLQYKAVLNSEPMFTCYPGDQNKYIYTGSIGKVLPGFLCYGKETHVGEP
HHHHHHHHHHCCCEEEEEECCCCEEEEECCCCCCEEEECCHHHHHHHHHCCCCCCCCCCC
FAGLNANYMASLLTAELELNTELCDIVEGEASPPPTNLLQRDLKEEYSVQIPHRAVTLFN
CCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCEECCHHHHHHHH
LFLLEKTMPDVVSLLYKKAMGVAEKIEETYAKQAYHFSKYNPFIPPSLKVNVLTYEELVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHH
YAIEQHGKEAIDKMQAIVLENRGGKDDRAITIELVDRLAILCKEKGPMIILFFAPPYYPA
HHHHHHHHHHHHHHHHHHEECCCCCCCCEEHHHHHHHHHHHHCCCCCEEEEEECCCCCCC
VSSRNNPFIQSAVAELESYGHDQHGVTFKTQNYFGGISDLSYVGLQYPVEAMTSLVENMP
CCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHCCCCCHHHHHHHHHCCC
LWNKGYSIPLQELAEFNVPVLNVGPVGKDAHQWTERLDVDYAFETLLDMLPVCIDRLLAR
CCCCCCCCCHHHHHHCCCCEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
NQMSQV
HHHHCC
>Mature Secondary Structure 
AKWQTKEELVQLLSNLVEIPSITGSKAETVLPDFVVEQLSSLSYFKENPSHLEKHPTGD
CCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCC
GRYFITALVKKEKHLKNTIVLVSHFDVVDVEDYGIWKEYAFQPQKLTSMFYSHKDEVPYP
CCEEHHHHHHHHHHHCCEEEEEEECCEEECCCCCCHHHHCCCHHHHHHHHHHCCCCCCCC
VQQDIEQGDWLFGRGIMDMKCGLTLHMAMVEQACEGSFDGNILLLTVPDEEVNSVGMRTA
HHHHHCCCCEEECCCCEEHHCCHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHCCHHHH
VPKLLELAKEHDLQYKAVLNSEPMFTCYPGDQNKYIYTGSIGKVLPGFLCYGKETHVGEP
HHHHHHHHHHCCCEEEEEECCCCEEEEECCCCCCEEEECCHHHHHHHHHCCCCCCCCCCC
FAGLNANYMASLLTAELELNTELCDIVEGEASPPPTNLLQRDLKEEYSVQIPHRAVTLFN
CCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCEECCHHHHHHHH
LFLLEKTMPDVVSLLYKKAMGVAEKIEETYAKQAYHFSKYNPFIPPSLKVNVLTYEELVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHH
YAIEQHGKEAIDKMQAIVLENRGGKDDRAITIELVDRLAILCKEKGPMIILFFAPPYYPA
HHHHHHHHHHHHHHHHHHEECCCCCCCCEEHHHHHHHHHHHHCCCCCEEEEEECCCCCCC
VSSRNNPFIQSAVAELESYGHDQHGVTFKTQNYFGGISDLSYVGLQYPVEAMTSLVENMP
CCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHCCCCCHHHHHHHHHCCC
LWNKGYSIPLQELAEFNVPVLNVGPVGKDAHQWTERLDVDYAFETLLDMLPVCIDRLLAR
CCCCCCCCCHHHHHHCCCCEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
NQMSQV
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]