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The map label for this gene is yclJ [H]

Identifier: 152975977

GI number: 152975977

Start: 2353244

End: 2353921

Strand: Reverse

Name: yclJ [H]

Synonym: Bcer98_2250

Alternate gene names: 152975977

Gene position: 2353921-2353244 (Counterclockwise)

Preceding gene: 152975978

Following gene: 152975976

Centisome position: 57.59

GC content: 36.43

Gene sequence:

>678_bases
ATGAATAAAACGGTATTACTTGTTGAAGATGAAAGAAGACTACGCGAAATTGTGAGCGATTATTTCCGTAATGAAGGCTT
TGAAGTAATCGAAGCAGAGGACGGGAAACAAGCGTTAGAATTATTTGCTGAACATACAATTGATTTAATTATGTTAGACA
TTATGTTGCCAGAAATTGATGGATGGTCCGTTTGTCGTCGTATTCGTAAAGAATCAGCGGTACCGATTATTATGCTAACA
GCGCGCTCTGATGAAGATGATACATTGCTAGGATTTGAGTTAGGTGCAGATGAGTATGTAACAAAACCATTCAGTCCGAA
AGTGTTAGTAGCGCGTGCAAAAACATTATTAAAACGAGCAGATGGAGCGGTAGGTGTTGCCGAAGATAATGTGCTATCTG
CAGCTGGAATTGATGTCAATCGACTTTCGAGAACAGTATTTGTAGATGGAAAGGAAATTATATTAACGCATAAGGAATTT
GAACTTCTTGTGTATTTAATGGAAAACAAAGGAATTGTATTATCACGTCAACATTTATTAGATCAGCTGTGGGGATACGA
TTATTATGGTGATGATCGAACAGTAGATACGCATATTAAAAAATTACGTAATAAACTAGGTGATAAAGCAAAGCATATTG
GAACCGTTATCCGAGTTGGGTATAAATTTGAAGAGTAA

Upstream 100 bases:

>100_bases
GAGGTTTCAACTCGATAAAAGAGATTTAACACTTCCATTTCGCGGAAGCTCCAATCAACGTATTATTCGATTGAAAGAGT
AAAAAGGCGGGATAAGTCAG

Downstream 100 bases:

>100_bases
TCTTTTTAACCTATGTAACTTAGCTTGAAAATATAACAAAATGACACTTTCTTTTGCAAATGAATGTACAAATTCTCATT
TTTTTGTCTAGAATAATGAA

Product: two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MNKTVLLVEDERRLREIVSDYFRNEGFEVIEAEDGKQALELFAEHTIDLIMLDIMLPEIDGWSVCRRIRKESAVPIIMLT
ARSDEDDTLLGFELGADEYVTKPFSPKVLVARAKTLLKRADGAVGVAEDNVLSAAGIDVNRLSRTVFVDGKEIILTHKEF
ELLVYLMENKGIVLSRQHLLDQLWGYDYYGDDRTVDTHIKKLRNKLGDKAKHIGTVIRVGYKFEE

Sequences:

>Translated_225_residues
MNKTVLLVEDERRLREIVSDYFRNEGFEVIEAEDGKQALELFAEHTIDLIMLDIMLPEIDGWSVCRRIRKESAVPIIMLT
ARSDEDDTLLGFELGADEYVTKPFSPKVLVARAKTLLKRADGAVGVAEDNVLSAAGIDVNRLSRTVFVDGKEIILTHKEF
ELLVYLMENKGIVLSRQHLLDQLWGYDYYGDDRTVDTHIKKLRNKLGDKAKHIGTVIRVGYKFEE
>Mature_225_residues
MNKTVLLVEDERRLREIVSDYFRNEGFEVIEAEDGKQALELFAEHTIDLIMLDIMLPEIDGWSVCRRIRKESAVPIIMLT
ARSDEDDTLLGFELGADEYVTKPFSPKVLVARAKTLLKRADGAVGVAEDNVLSAAGIDVNRLSRTVFVDGKEIILTHKEF
ELLVYLMENKGIVLSRQHLLDQLWGYDYYGDDRTVDTHIKKLRNKLGDKAKHIGTVIRVGYKFEE

Specific function: Could be member of the two-component regulatory system yclK/yclJ [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786599, Length=228, Percent_Identity=39.0350877192982, Blast_Score=161, Evalue=4e-41,
Organism=Escherichia coli, GI1788394, Length=223, Percent_Identity=40.3587443946188, Blast_Score=155, Evalue=2e-39,
Organism=Escherichia coli, GI1789809, Length=229, Percent_Identity=34.9344978165939, Blast_Score=144, Evalue=7e-36,
Organism=Escherichia coli, GI1790863, Length=228, Percent_Identity=34.6491228070175, Blast_Score=140, Evalue=7e-35,
Organism=Escherichia coli, GI1790860, Length=207, Percent_Identity=40.5797101449275, Blast_Score=139, Evalue=2e-34,
Organism=Escherichia coli, GI87082012, Length=221, Percent_Identity=35.2941176470588, Blast_Score=138, Evalue=3e-34,
Organism=Escherichia coli, GI1786784, Length=223, Percent_Identity=37.6681614349776, Blast_Score=137, Evalue=5e-34,
Organism=Escherichia coli, GI1787229, Length=211, Percent_Identity=39.8104265402844, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI1786911, Length=223, Percent_Identity=34.9775784753363, Blast_Score=130, Evalue=7e-32,
Organism=Escherichia coli, GI2367329, Length=213, Percent_Identity=39.4366197183099, Blast_Score=125, Evalue=2e-30,
Organism=Escherichia coli, GI145693140, Length=232, Percent_Identity=33.6206896551724, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1787375, Length=223, Percent_Identity=33.6322869955157, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1789402, Length=222, Percent_Identity=32.4324324324324, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1790552, Length=221, Percent_Identity=36.1990950226244, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI1788550, Length=101, Percent_Identity=36.6336633663366, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1790299, Length=101, Percent_Identity=30.6930693069307, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1788191, Length=108, Percent_Identity=33.3333333333333, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI1787487, Length=102, Percent_Identity=31.3725490196078, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1790437, Length=104, Percent_Identity=30.7692307692308, Blast_Score=61, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 25684; Mature: 25684

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKTVLLVEDERRLREIVSDYFRNEGFEVIEAEDGKQALELFAEHTIDLIMLDIMLPEID
CCCEEEEEECHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHEEHHCCCCC
GWSVCRRIRKESAVPIIMLTARSDEDDTLLGFELGADEYVTKPFSPKVLVARAKTLLKRA
CHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEECCCHHHCCCCCCHHHHHHHHHHHHHC
DGAVGVAEDNVLSAAGIDVNRLSRTVFVDGKEIILTHKEFELLVYLMENKGIVLSRQHLL
CCCCEECCCCEEEECCCCHHHCCEEEEECCCEEEEEECCEEEEEEEECCCCEEEEHHHHH
DQLWGYDYYGDDRTVDTHIKKLRNKLGDKAKHIGTVIRVGYKFEE
HHHHCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHEECEEECC
>Mature Secondary Structure
MNKTVLLVEDERRLREIVSDYFRNEGFEVIEAEDGKQALELFAEHTIDLIMLDIMLPEID
CCCEEEEEECHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHEEHHCCCCC
GWSVCRRIRKESAVPIIMLTARSDEDDTLLGFELGADEYVTKPFSPKVLVARAKTLLKRA
CHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEECCCHHHCCCCCCHHHHHHHHHHHHHC
DGAVGVAEDNVLSAAGIDVNRLSRTVFVDGKEIILTHKEFELLVYLMENKGIVLSRQHLL
CCCCEECCCCEEEECCCCHHHCCEEEEECCCEEEEEECCEEEEEEEECCCCEEEEHHHHH
DQLWGYDYYGDDRTVDTHIKKLRNKLGDKAKHIGTVIRVGYKFEE
HHHHCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHEECEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]