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The map label for this gene is yodH [H]

Identifier: 152975968

GI number: 152975968

Start: 2338317

End: 2339036

Strand: Reverse

Name: yodH [H]

Synonym: Bcer98_2241

Alternate gene names: 152975968

Gene position: 2339036-2338317 (Counterclockwise)

Preceding gene: 152975969

Following gene: 152975966

Centisome position: 57.23

GC content: 39.58

Gene sequence:

>720_bases
ATGAAGCGAAACACCTATATTGATTTTTTAGCTTATTACGGAATTGGGAGTGCTCACCCAGGTGGATTTACACTTACGAA
ACAAGTATTAGCACAAATGCCACTTGGAATGCATGCGAACGTACTAGAGGTCGGATGCGGAACAGGACGGACAGCAGCTT
ATATGAGCCAAGTGTATGGCTATCAGGTGACGGCGGTAGAAAATAATGAAATGATGATTCAAAAAGCGAGGGATAGATGG
TTAGCTCAAGGGCTAAGTATAGACTTAATACAAGGAAAAGTTGAACAGTTACCATGTAAGGATGAGACTTTTGAACTTGT
TCTTGGGGAATCCATTCTTGCGTTTACGAATAAAGAGCAGTCTATTCCGGAATGCTATCGCGTACTTCAGAACAATGGAA
AGCTTGTTGTGATTGAAATGGTTCTAGAATCTCCTCTAGACAAAGAGGCTGAAACAACTATATTACAATTATATGGAATG
GAGGAATTGTTAACGGAGACAGAGTGGATTCATTTGTTTCAAAAAGCAAACTTTCAGCGTATTATCGTTGGCGGAGGTGG
TACAATTGCAGAAACGGTTGCGAGTCAAATGGAAGAACCAGAATGGAATGTATCACAATTTATTCCAGAAGAACTCTATC
ATACGTGGGTGCAGCATGAACAGCTATTGCATAAATATCAACACATGTTAGGACATCGAGTTTTCATTTGTGAAAAATAA

Upstream 100 bases:

>100_bases
TTCTGATGATAAATAAGAATGAGGGGCACGATGATGTGCCCTTTTTTCTATGCACTTTTTTCTTTTGTTCGAATATATAA
AATGAAAAAGGAAGAATCCT

Downstream 100 bases:

>100_bases
ATATGTAAAAAGAGTGAATCATCAAATGACGGCACTGAAAAAGTGATTGCTTTGAAAAAATAACACGTATTTTAGCAAAA
TGTTGAGAGTGAAAAGGAGC

Product: methyltransferase type 11

Products: S-Adenosyl-L-Homocysteine; @OCTA02.txt*2- Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol!; Menaquinol. [C]

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MKRNTYIDFLAYYGIGSAHPGGFTLTKQVLAQMPLGMHANVLEVGCGTGRTAAYMSQVYGYQVTAVENNEMMIQKARDRW
LAQGLSIDLIQGKVEQLPCKDETFELVLGESILAFTNKEQSIPECYRVLQNNGKLVVIEMVLESPLDKEAETTILQLYGM
EELLTETEWIHLFQKANFQRIIVGGGGTIAETVASQMEEPEWNVSQFIPEELYHTWVQHEQLLHKYQHMLGHRVFICEK

Sequences:

>Translated_239_residues
MKRNTYIDFLAYYGIGSAHPGGFTLTKQVLAQMPLGMHANVLEVGCGTGRTAAYMSQVYGYQVTAVENNEMMIQKARDRW
LAQGLSIDLIQGKVEQLPCKDETFELVLGESILAFTNKEQSIPECYRVLQNNGKLVVIEMVLESPLDKEAETTILQLYGM
EELLTETEWIHLFQKANFQRIIVGGGGTIAETVASQMEEPEWNVSQFIPEELYHTWVQHEQLLHKYQHMLGHRVFICEK
>Mature_239_residues
MKRNTYIDFLAYYGIGSAHPGGFTLTKQVLAQMPLGMHANVLEVGCGTGRTAAYMSQVYGYQVTAVENNEMMIQKARDRW
LAQGLSIDLIQGKVEQLPCKDETFELVLGESILAFTNKEQSIPECYRVLQNNGKLVVIEMVLESPLDKEAETTILQLYGM
EELLTETEWIHLFQKANFQRIIVGGGGTIAETVASQMEEPEWNVSQFIPEELYHTWVQHEQLLHKYQHMLGHRVFICEK

Specific function: Methyltransferase Required For The Conversion Of Dimethylmenaquinone (Dmkh2) To Menaquinone (Mkh2) And The Conversion Of 2-Polyprenyl-6-Methoxy-1,4-Benzoquinol (Ddmqh2) To 2-Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol (Dmqh2). [C]

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 27218; Mature: 27218

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRNTYIDFLAYYGIGSAHPGGFTLTKQVLAQMPLGMHANVLEVGCGTGRTAAYMSQVYG
CCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHC
YQVTAVENNEMMIQKARDRWLAQGLSIDLIQGKVEQLPCKDETFELVLGESILAFTNKEQ
EEEEEEECCHHHHHHHHHHHHHCCCCEEEECCHHHHCCCCCCHHHHHHCCHHEEECCCCC
SIPECYRVLQNNGKLVVIEMVLESPLDKEAETTILQLYGMEELLTETEWIHLFQKANFQR
CHHHHHHHHHCCCCEEEEEEHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCEE
IIVGGGGTIAETVASQMEEPEWNVSQFIPEELYHTWVQHEQLLHKYQHMLGHRVFICEK
EEEECCCHHHHHHHHHHCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECC
>Mature Secondary Structure
MKRNTYIDFLAYYGIGSAHPGGFTLTKQVLAQMPLGMHANVLEVGCGTGRTAAYMSQVYG
CCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHC
YQVTAVENNEMMIQKARDRWLAQGLSIDLIQGKVEQLPCKDETFELVLGESILAFTNKEQ
EEEEEEECCHHHHHHHHHHHHHCCCCEEEECCHHHHCCCCCCHHHHHHCCHHEEECCCCC
SIPECYRVLQNNGKLVVIEMVLESPLDKEAETTILQLYGMEELLTETEWIHLFQKANFQR
CHHHHHHHHHCCCCEEEEEEHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCEE
IIVGGGGTIAETVASQMEEPEWNVSQFIPEELYHTWVQHEQLLHKYQHMLGHRVFICEK
EEEECCCHHHHHHHHHHCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: S-Adenosyl-L-Methionine; 2-Polyprenyl-6- Methoxy-1,4-Benzoquinol; Demethylmenaquinol [C]

Specific reaction: S-Adenosyl-L-Methionine + @OCTA02.txt*2-Polyprenyl-6- Methoxy-1,4-Benzoquinol! = S-Adenosyl-L-Homocysteine + 2- Polyprenyl-3-Methyl-6-Methoxy -1,4-Benzoquinol S-Adenosyl-L-Methionine + Demethylmenaquinol = S-Adenosyl-L-Homocysteine + Menaquinol. [C]

General reaction: Transferring one-carbon groups; Methyltransferases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377 [H]