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The map label for this gene is yoaR [H]

Identifier: 152975945

GI number: 152975945

Start: 2305656

End: 2306570

Strand: Reverse

Name: yoaR [H]

Synonym: Bcer98_2217

Alternate gene names: 152975945

Gene position: 2306570-2305656 (Counterclockwise)

Preceding gene: 152975949

Following gene: 152975944

Centisome position: 56.44

GC content: 37.38

Gene sequence:

>915_bases
ATGTTGTTACGTAAAGCAAAAAGTATTGTAATAGGGGCACTATGCATTGGTGTAGTAAGTGGCTGTGGTACAAAAGTTAG
TGATGTAGCGTTAGTTAGCGATATTGGAGGCCATACAGTAGAAGCGAAAACAGACGTTAATGATAGTATTAGTTTAGTAG
ATGGTCGCACAGGAACAGAAGTGAAGAAACTAGATTTATCCAGCTTAGGATACTTTGAAGATGAAAATAAGTTTAAAAAA
GAAGTAACAAAAATTGTAAGTGAAGTTGGGAAAAGCGTTGATAAAAAAATGGTTCCTTCGCGTATGACAAGTGATGGAAC
ATGGCAAGAAGGTAAGCCTTCTTATGAGTTAATGGAAAAGGAATTAGTAGAAAAGTTAATGAATGTCGGTATGTGGGATT
CTTCATATCAGTTACCGATTGTTGAGAAAAAACCAGTAGCAACACCATCTGATGCAAGCGGATCTGGTACAGTCATCGGC
CGATATGAAACAAATTTAGGTGGCTCGACTGGTGGAAGAATCGAAAATATTCGTATATCTGCTAATCATATTAGCGGAGT
TGTATTAGGAAAAGGAGATCGCTTTTCTTTTAATGCATTAATTGGAGATACAACACCAGATAAAGGGTATCAATTAGGAA
AAGAAATTGTTGATGGGAAATTAGTAGATGGATATGGAGGCGGAGTGTGTCAAACTTCATCCACTTTATATAACGCGGCA
GATCAAGCTGGTTTAAAAATGGTAGAGAGAACAACGCATTCTAAAGCAGTTGGATATGTACCAAAGGGAAGAGATGCGAC
AATAGCCTATCCGTATTTAGACTTAGTATTTGAAAATACAAAAGATGTACCTGTCAAACTGTATATGGGTGTCGAAGGTG
GAAAGCTTGTTGCTGAAGTACGTGCAATGAAGTAA

Upstream 100 bases:

>100_bases
AAAATGTAATATTTTATAATCATATTGTAAAGTAAGGCAATCATACATACATAAGATAGGAAAAAAGAGCAAGAAAAGTT
GTTGGGGAAAAGGAGAGAGT

Downstream 100 bases:

>100_bases
GAATTTGACTTTACTTATTGTAAACTTGGCCATTCTTTTTAGTATAATACTAAAAAGGATGGCTTTTTATCTATTTTCCG
AAAGGAGACGCCCGCCTTAA

Product: VanW family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MLLRKAKSIVIGALCIGVVSGCGTKVSDVALVSDIGGHTVEAKTDVNDSISLVDGRTGTEVKKLDLSSLGYFEDENKFKK
EVTKIVSEVGKSVDKKMVPSRMTSDGTWQEGKPSYELMEKELVEKLMNVGMWDSSYQLPIVEKKPVATPSDASGSGTVIG
RYETNLGGSTGGRIENIRISANHISGVVLGKGDRFSFNALIGDTTPDKGYQLGKEIVDGKLVDGYGGGVCQTSSTLYNAA
DQAGLKMVERTTHSKAVGYVPKGRDATIAYPYLDLVFENTKDVPVKLYMGVEGGKLVAEVRAMK

Sequences:

>Translated_304_residues
MLLRKAKSIVIGALCIGVVSGCGTKVSDVALVSDIGGHTVEAKTDVNDSISLVDGRTGTEVKKLDLSSLGYFEDENKFKK
EVTKIVSEVGKSVDKKMVPSRMTSDGTWQEGKPSYELMEKELVEKLMNVGMWDSSYQLPIVEKKPVATPSDASGSGTVIG
RYETNLGGSTGGRIENIRISANHISGVVLGKGDRFSFNALIGDTTPDKGYQLGKEIVDGKLVDGYGGGVCQTSSTLYNAA
DQAGLKMVERTTHSKAVGYVPKGRDATIAYPYLDLVFENTKDVPVKLYMGVEGGKLVAEVRAMK
>Mature_304_residues
MLLRKAKSIVIGALCIGVVSGCGTKVSDVALVSDIGGHTVEAKTDVNDSISLVDGRTGTEVKKLDLSSLGYFEDENKFKK
EVTKIVSEVGKSVDKKMVPSRMTSDGTWQEGKPSYELMEKELVEKLMNVGMWDSSYQLPIVEKKPVATPSDASGSGTVIG
RYETNLGGSTGGRIENIRISANHISGVVLGKGDRFSFNALIGDTTPDKGYQLGKEIVDGKLVDGYGGGVCQTSSTLYNAA
DQAGLKMVERTTHSKAVGYVPKGRDATIAYPYLDLVFENTKDVPVKLYMGVEGGKLVAEVRAMK

Specific function: Unknown

COG id: COG2720

COG function: function code V; Uncharacterized vancomycin resistance protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022029
- InterPro:   IPR007391 [H]

Pfam domain/function: PF12229 PG_binding_4; PF04294 VanW [H]

EC number: NA

Molecular weight: Translated: 32517; Mature: 32517

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLRKAKSIVIGALCIGVVSGCGTKVSDVALVSDIGGHTVEAKTDVNDSISLVDGRTGTE
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHEEECCCCCEEEEECCCCCCEEEEECCCCCC
VKKLDLSSLGYFEDENKFKKEVTKIVSEVGKSVDKKMVPSRMTSDGTWQEGKPSYELMEK
EEEECHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH
ELVEKLMNVGMWDSSYQLPIVEKKPVATPSDASGSGTVIGRYETNLGGSTGGRIENIRIS
HHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEE
ANHISGVVLGKGDRFSFNALIGDTTPDKGYQLGKEIVDGKLVDGYGGGVCQTSSTLYNAA
ECCEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHCCEEEECCCCCEEECCHHHHHHH
DQAGLKMVERTTHSKAVGYVPKGRDATIAYPYLDLVFENTKDVPVKLYMGVEGGKLVAEV
HHHHHHHHHHHHCCCEEECCCCCCCCEEECCEEEEEECCCCCCCEEEEEECCCCEEEEEE
RAMK
ECCC
>Mature Secondary Structure
MLLRKAKSIVIGALCIGVVSGCGTKVSDVALVSDIGGHTVEAKTDVNDSISLVDGRTGTE
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHEEECCCCCEEEEECCCCCCEEEEECCCCCC
VKKLDLSSLGYFEDENKFKKEVTKIVSEVGKSVDKKMVPSRMTSDGTWQEGKPSYELMEK
EEEECHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH
ELVEKLMNVGMWDSSYQLPIVEKKPVATPSDASGSGTVIGRYETNLGGSTGGRIENIRIS
HHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEE
ANHISGVVLGKGDRFSFNALIGDTTPDKGYQLGKEIVDGKLVDGYGGGVCQTSSTLYNAA
ECCEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHCCEEEECCCCCEEECCHHHHHHH
DQAGLKMVERTTHSKAVGYVPKGRDATIAYPYLDLVFENTKDVPVKLYMGVEGGKLVAEV
HHHHHHHHHHHHCCCEEECCCCCCCCEEECCEEEEEECCCCCCCEEEEEECCCCEEEEEE
RAMK
ECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]