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The map label for this gene is lytB [H]

Identifier: 152975228

GI number: 152975228

Start: 1529430

End: 1530806

Strand: Direct

Name: lytB [H]

Synonym: Bcer98_1431

Alternate gene names: 152975228

Gene position: 1529430-1530806 (Clockwise)

Preceding gene: 152975226

Following gene: 152975230

Centisome position: 37.42

GC content: 35.29

Gene sequence:

>1377_bases
ATGAAAAAAGTAATTTCTAACGTTTTAGCAATGACAGCTGCACTACAAGTTATAATGGTTCCAACAACCTCATTTGCGGC
AGAAAAAGGATTTTCAGATGTACCAAAGAGTCATTGGGCATATGAGGCAATCAATGATTTAGCAAATCGAAACATCATTG
CAGGTTATGACAACGGTAAATTTGGATTGGGAGACAGCGTAACGCGTGAACAAGTAGCTGCACTTATTTATCGTGCATTG
AAACCAGAAGCGAAAGCAGAATATAAAAATCCATATCATGATGTAAGTGCAAGTACAACAATGTTTCCAAATGAGATTTT
AGCTTTAACGGAGATGGGAATCTTTACAGGGGATGAGAACAAAAACTTTAGACCAAAGGATTCATTAACTCGCGCTGAAA
TGGCAATGATTTTACAAAGAGCTTATCATTTAAAAGTAAAGGCGAATCATACATTTCATGATGTGGATCCGAATTCTTGG
GCGAAAGATGCAATTAGTGCGTTACAGTCTAATGGAATGGCAGAGGGAGATGGAACGGGTGCATTTTATCCGTCAAAAAC
TGTCACACGTGAGGAATATGCACAATTTTTATTTAATGCGGAACAATCTTATTTAAATTTAGATTTAACATTAGCTTCCA
ATGTAACAGCAGAAGAAATTGATAATTTTCTTAAGAAATCGCGTTCTGATAGTCCGTTAATTGGCCATGGACAAGACTTT
ATTGCAGCACAAAATGAACATGGTGTAAATGCTCTTTACTTAGCAGCACATGCAATTTTAGAATCTGGATATGGAAGATC
TGAGATTGCATATCGTAAACATAATTTATTTGGACTACGTGCATATGATCGCGATCCATTCTATCATGCAAAATATTTAC
CAACATACCGTGATAGTATTTCGTACAATGCTAACTACGTGAGAGAACGTTATTTAGAGAAAGGTGCAATCTATTATAAT
GGTCCAACATTAGTTGGTATGAATGTGAAATATGCATCCGATCCAGAATGGGCTGGAAAAATTGCTGGTTTAATGGAGCG
TATTAAGCCGTTTGATCGAAATGATTATAAAAATGCTAACAGATTACCGAAAAACCCACATACTTTAGACGTTGAAGCGT
TAGGAAATGAAATTCCATATAAGGATTTAGGAAATAGAGAAATTGCTGTTCAGGCATCTGGAAAATATTATAAAGTGCCG
TATCCATACGATTTGAAAATTAAGAGTATCCCAGACATTACACAAAATGAAATGGGAACATTAACGAATGGATCAAAAGT
AACAGTTCATCGTGAAGATCCAAATGGATGGGTAGAGTTTTCGATGAAAGATAAGCAAGAAAAATATTGGACATTGAAAA
GTAATTTAAAAATGTAA

Upstream 100 bases:

>100_bases
GAGAGTATGAATGAGTTTGATAGATGAAATGCTAGTATTTTATGAAAAAAGGAGGCTAGTTAACACGGGACAAGTAAGTA
CATAACGTGTTAAGAGTAAG

Downstream 100 bases:

>100_bases
TAAACGAAAAAGGTGTTTTCTCCACAGAAAACACCTTTTTGATTTGAAAAATTTGTTATTCTTCAGTAAATATAAATGTT
TGTTTCATCTTTTTACTTTT

Product: S-layer domain-containing protein

Products: NA

Alternate protein names: Murein hydrolase [H]

Number of amino acids: Translated: 458; Mature: 458

Protein sequence:

>458_residues
MKKVISNVLAMTAALQVIMVPTTSFAAEKGFSDVPKSHWAYEAINDLANRNIIAGYDNGKFGLGDSVTREQVAALIYRAL
KPEAKAEYKNPYHDVSASTTMFPNEILALTEMGIFTGDENKNFRPKDSLTRAEMAMILQRAYHLKVKANHTFHDVDPNSW
AKDAISALQSNGMAEGDGTGAFYPSKTVTREEYAQFLFNAEQSYLNLDLTLASNVTAEEIDNFLKKSRSDSPLIGHGQDF
IAAQNEHGVNALYLAAHAILESGYGRSEIAYRKHNLFGLRAYDRDPFYHAKYLPTYRDSISYNANYVRERYLEKGAIYYN
GPTLVGMNVKYASDPEWAGKIAGLMERIKPFDRNDYKNANRLPKNPHTLDVEALGNEIPYKDLGNREIAVQASGKYYKVP
YPYDLKIKSIPDITQNEMGTLTNGSKVTVHREDPNGWVEFSMKDKQEKYWTLKSNLKM

Sequences:

>Translated_458_residues
MKKVISNVLAMTAALQVIMVPTTSFAAEKGFSDVPKSHWAYEAINDLANRNIIAGYDNGKFGLGDSVTREQVAALIYRAL
KPEAKAEYKNPYHDVSASTTMFPNEILALTEMGIFTGDENKNFRPKDSLTRAEMAMILQRAYHLKVKANHTFHDVDPNSW
AKDAISALQSNGMAEGDGTGAFYPSKTVTREEYAQFLFNAEQSYLNLDLTLASNVTAEEIDNFLKKSRSDSPLIGHGQDF
IAAQNEHGVNALYLAAHAILESGYGRSEIAYRKHNLFGLRAYDRDPFYHAKYLPTYRDSISYNANYVRERYLEKGAIYYN
GPTLVGMNVKYASDPEWAGKIAGLMERIKPFDRNDYKNANRLPKNPHTLDVEALGNEIPYKDLGNREIAVQASGKYYKVP
YPYDLKIKSIPDITQNEMGTLTNGSKVTVHREDPNGWVEFSMKDKQEKYWTLKSNLKM
>Mature_458_residues
MKKVISNVLAMTAALQVIMVPTTSFAAEKGFSDVPKSHWAYEAINDLANRNIIAGYDNGKFGLGDSVTREQVAALIYRAL
KPEAKAEYKNPYHDVSASTTMFPNEILALTEMGIFTGDENKNFRPKDSLTRAEMAMILQRAYHLKVKANHTFHDVDPNSW
AKDAISALQSNGMAEGDGTGAFYPSKTVTREEYAQFLFNAEQSYLNLDLTLASNVTAEEIDNFLKKSRSDSPLIGHGQDF
IAAQNEHGVNALYLAAHAILESGYGRSEIAYRKHNLFGLRAYDRDPFYHAKYLPTYRDSISYNANYVRERYLEKGAIYYN
GPTLVGMNVKYASDPEWAGKIAGLMERIKPFDRNDYKNANRLPKNPHTLDVEALGNEIPYKDLGNREIAVQASGKYYKVP
YPYDLKIKSIPDITQNEMGTLTNGSKVTVHREDPNGWVEFSMKDKQEKYWTLKSNLKM

Specific function: Plays an important role in cell wall degradation and cell separation [H]

COG id: COG4193

COG function: function code G; Beta- N-acetylglucosaminidase

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 13 cell wall-binding repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018337
- InterPro:   IPR013338
- InterPro:   IPR002901 [H]

Pfam domain/function: PF01473 CW_binding_1; PF01832 Glucosaminidase [H]

EC number: =3.2.1.96 [H]

Molecular weight: Translated: 51649; Mature: 51649

Theoretical pI: Translated: 7.48; Mature: 7.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVISNVLAMTAALQVIMVPTTSFAAEKGFSDVPKSHWAYEAINDLANRNIIAGYDNGK
CHHHHHHHHHHHHHHEEEEECCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCC
FGLGDSVTREQVAALIYRALKPEAKAEYKNPYHDVSASTTMFPNEILALTEMGIFTGDEN
CCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCEECCHHHHHHHHCCEEECCCC
KNFRPKDSLTRAEMAMILQRAYHLKVKANHTFHDVDPNSWAKDAISALQSNGMAEGDGTG
CCCCCCHHHHHHHHHHHHHHHHEEEEECCCEEECCCCCHHHHHHHHHHHHCCCCCCCCCC
AFYPSKTVTREEYAQFLFNAEQSYLNLDLTLASNVTAEEIDNFLKKSRSDSPLIGHGQDF
CCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHHHCCCCCCCEECCCHH
IAAQNEHGVNALYLAAHAILESGYGRSEIAYRKHNLFGLRAYDRDPFYHAKYLPTYRDSI
EEECCCCCCHHHHHHHHHHHHCCCCCCHHHEECCCEEEEEECCCCCCEEEECCCCHHHCC
SYNANYVRERYLEKGAIYYNGPTLVGMNVKYASDPEWAGKIAGLMERIKPFDRNDYKNAN
CCCHHHHHHHHHHCCCEEECCCEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCC
RLPKNPHTLDVEALGNEIPYKDLGNREIAVQASGKYYKVPYPYDLKIKSIPDITQNEMGT
CCCCCCCEEEHHHCCCCCCCCCCCCEEEEEEECCCEEECCCCCCEEECCCCCCCCCCCCC
LTNGSKVTVHREDPNGWVEFSMKDKQEKYWTLKSNLKM
CCCCCEEEEEEECCCCEEEEEECCCCHHEEEHHCCCCC
>Mature Secondary Structure
MKKVISNVLAMTAALQVIMVPTTSFAAEKGFSDVPKSHWAYEAINDLANRNIIAGYDNGK
CHHHHHHHHHHHHHHEEEEECCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCC
FGLGDSVTREQVAALIYRALKPEAKAEYKNPYHDVSASTTMFPNEILALTEMGIFTGDEN
CCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCEECCHHHHHHHHCCEEECCCC
KNFRPKDSLTRAEMAMILQRAYHLKVKANHTFHDVDPNSWAKDAISALQSNGMAEGDGTG
CCCCCCHHHHHHHHHHHHHHHHEEEEECCCEEECCCCCHHHHHHHHHHHHCCCCCCCCCC
AFYPSKTVTREEYAQFLFNAEQSYLNLDLTLASNVTAEEIDNFLKKSRSDSPLIGHGQDF
CCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHHHCCCCCCCEECCCHH
IAAQNEHGVNALYLAAHAILESGYGRSEIAYRKHNLFGLRAYDRDPFYHAKYLPTYRDSI
EEECCCCCCHHHHHHHHHHHHCCCCCCHHHEECCCEEEEEECCCCCCEEEECCCCHHHCC
SYNANYVRERYLEKGAIYYNGPTLVGMNVKYASDPEWAGKIAGLMERIKPFDRNDYKNAN
CCCHHHHHHHHHHCCCEEECCCEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCC
RLPKNPHTLDVEALGNEIPYKDLGNREIAVQASGKYYKVPYPYDLKIKSIPDITQNEMGT
CCCCCCCEEEHHHCCCCCCCCCCCCEEEEEEECCCEEECCCCCCEEECCCCCCCCCCCCC
LTNGSKVTVHREDPNGWVEFSMKDKQEKYWTLKSNLKM
CCCCCEEEEEEECCCCEEEEEECCCCHHEEEHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11463916 [H]