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The map label for this gene is glpD [H]

Identifier: 152974624

GI number: 152974624

Start: 924301

End: 925983

Strand: Direct

Name: glpD [H]

Synonym: Bcer98_0808

Alternate gene names: 152974624

Gene position: 924301-925983 (Clockwise)

Preceding gene: 152974623

Following gene: 152974626

Centisome position: 22.62

GC content: 38.62

Gene sequence:

>1683_bases
ATGAATTTTTCAAGTAAACAACGTAAAGACGTATTAAAAGAAGTTCATAAACAAGAGTTAGATTTAATTGTAATTGGTGG
TGGTATTACCGGTTCTGGTATCGCATTAGATGCTGTAACGCGCGGACTATCAACAGTTGTGTTCGAAATGCAAGACTTTG
CAGCAGGAACATCAAGCCGCTCAACAAAACTTGTACATGGCGGTTTACGTTATTTAAAACAATTTGAAGTGAAGATGGTA
GCAGAAGTAGGGAAAGAGCGTGCAATTGTATATGAGAACGGTCCCCATGTAACAACACCTGAGTGGATGCTACTTCCATT
CCATAAGGGCGGTACATTTGGTGCATTTACAACATCAATCGGTCTTCGCGTATATGACTTCTTAGCGGGAGTAAAACGAA
GCGAACGTAGAAAAATGTTTAGCCGTGAGGAAACAATGAAGAAAGAACCACTTGTAAAACAAGAAGGGTTAAAAGGCGGC
GGTTACTACGTAGAGTATCGTACAGATGATGCTCGTTTAACAATCGAAGTCATGAAAGAAGCGATTGAGCATGGTGCAAA
AGCTGTTAACTATGCAAAAGTAGACGGTTTCTTATATAAAGACGGAAAAGTATGCGGTGTACGTGTTATTGATTTATTAG
ATGGAAAAGTATATGAGGTTTACGGCAAGAAAATTGTAAACGCAGCGGGTCCTTGGGTAGATACACTTCGTGAAAAAGAT
AATTCGAAAAAAGGAAAAGTATTACAATTATCAAAAGGTGTTCACTTAGTTATCGACCAAAAACGTTTTCCGCTTGGCCA
AGCGATTTATTTTGATACACCAGATGGACGTATGGTCTTCGCGATTCCACGTGGTAATAAAACATACGTTGGTACAACGG
ATACATTCTATGATAAAGATGCAGCGGTACCAAAAATGACAACAGAAGATCGTGCATATATTATTAAAGCGATTAATTAC
ATGTTCCCAACTGTGAAAATTACAGAAAAAGATATTGAATCAAGCTGGGCTGGTGTTCGTCCGTTAATTTATGAAGAAGG
TAAGAGTGCATCTGAAATTTCTCGTAAAGATGAAATTTGGACTTCTGATTCAGGGCTAATTACAATCGCTGGTGGTAAGC
TAACTGGATATCGTAAAATGGCAGAAATGGTTGTTGACTATGTTGGATCTTTAATGCAAAAAGAAGGTCACAGTGCATTA
CCAAAAACAAAAACGAAACATATGCCAATCTCTGGTGGACATGTAGGTGGTTCTGAAAGATTGCCAGCGTTCATTTCGAA
AAAAGCAGGAGAAGGTACGAAATACGGTTTAACAACTGAGCAAGCAGAAGCATTTGCGAAATTCTACGGCTCTAACGTTG
ATATTCTCTTTAACTTAGCAAAAGATTTAAAAGAGGAAGCAAAAGAATACAACATGCCGTTAGACGTCCTTGTACCGCTT
GTATACGCGATGGACTATGAAATGACAGTAAAACCTGTCGACTTCTTTGTACGTCGCAGAGGAGCTGTATTCTTCAATAT
CCACTGGGTGTATGACTGGAAAGAACCTGTCATTGCATACATGGCAGCAAAACTAGGCTGGACAAATGAAGAAAAAGCAA
AATATACAGCAGAATTAAATCAAGCATTAAAAGATGCTACCGTGCCTGTAGATGAACAAGAACAAGTAGCATTAGCAAAA
TAA

Upstream 100 bases:

>100_bases
TAATTCGGTAGGAGATATGGAGAGACCATGACACGCTATAGAGCGATTTCTATAGTGGTGTTTGTGGTCTCTTTTTTTCG
TATCAAAGGGAGGAATTACC

Downstream 100 bases:

>100_bases
GCAAATAGTGATAAAAAGCGCTTAGAGGGAGGAAATAACCCCTTTAGGCGCTTTTTGGTTCTATTGAGAAATTTTGTTAA
GGTTAAGTGATGCCAACAAA

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 560; Mature: 560

Protein sequence:

>560_residues
MNFSSKQRKDVLKEVHKQELDLIVIGGGITGSGIALDAVTRGLSTVVFEMQDFAAGTSSRSTKLVHGGLRYLKQFEVKMV
AEVGKERAIVYENGPHVTTPEWMLLPFHKGGTFGAFTTSIGLRVYDFLAGVKRSERRKMFSREETMKKEPLVKQEGLKGG
GYYVEYRTDDARLTIEVMKEAIEHGAKAVNYAKVDGFLYKDGKVCGVRVIDLLDGKVYEVYGKKIVNAAGPWVDTLREKD
NSKKGKVLQLSKGVHLVIDQKRFPLGQAIYFDTPDGRMVFAIPRGNKTYVGTTDTFYDKDAAVPKMTTEDRAYIIKAINY
MFPTVKITEKDIESSWAGVRPLIYEEGKSASEISRKDEIWTSDSGLITIAGGKLTGYRKMAEMVVDYVGSLMQKEGHSAL
PKTKTKHMPISGGHVGGSERLPAFISKKAGEGTKYGLTTEQAEAFAKFYGSNVDILFNLAKDLKEEAKEYNMPLDVLVPL
VYAMDYEMTVKPVDFFVRRRGAVFFNIHWVYDWKEPVIAYMAAKLGWTNEEKAKYTAELNQALKDATVPVDEQEQVALAK

Sequences:

>Translated_560_residues
MNFSSKQRKDVLKEVHKQELDLIVIGGGITGSGIALDAVTRGLSTVVFEMQDFAAGTSSRSTKLVHGGLRYLKQFEVKMV
AEVGKERAIVYENGPHVTTPEWMLLPFHKGGTFGAFTTSIGLRVYDFLAGVKRSERRKMFSREETMKKEPLVKQEGLKGG
GYYVEYRTDDARLTIEVMKEAIEHGAKAVNYAKVDGFLYKDGKVCGVRVIDLLDGKVYEVYGKKIVNAAGPWVDTLREKD
NSKKGKVLQLSKGVHLVIDQKRFPLGQAIYFDTPDGRMVFAIPRGNKTYVGTTDTFYDKDAAVPKMTTEDRAYIIKAINY
MFPTVKITEKDIESSWAGVRPLIYEEGKSASEISRKDEIWTSDSGLITIAGGKLTGYRKMAEMVVDYVGSLMQKEGHSAL
PKTKTKHMPISGGHVGGSERLPAFISKKAGEGTKYGLTTEQAEAFAKFYGSNVDILFNLAKDLKEEAKEYNMPLDVLVPL
VYAMDYEMTVKPVDFFVRRRGAVFFNIHWVYDWKEPVIAYMAAKLGWTNEEKAKYTAELNQALKDATVPVDEQEQVALAK
>Mature_560_residues
MNFSSKQRKDVLKEVHKQELDLIVIGGGITGSGIALDAVTRGLSTVVFEMQDFAAGTSSRSTKLVHGGLRYLKQFEVKMV
AEVGKERAIVYENGPHVTTPEWMLLPFHKGGTFGAFTTSIGLRVYDFLAGVKRSERRKMFSREETMKKEPLVKQEGLKGG
GYYVEYRTDDARLTIEVMKEAIEHGAKAVNYAKVDGFLYKDGKVCGVRVIDLLDGKVYEVYGKKIVNAAGPWVDTLREKD
NSKKGKVLQLSKGVHLVIDQKRFPLGQAIYFDTPDGRMVFAIPRGNKTYVGTTDTFYDKDAAVPKMTTEDRAYIIKAINY
MFPTVKITEKDIESSWAGVRPLIYEEGKSASEISRKDEIWTSDSGLITIAGGKLTGYRKMAEMVVDYVGSLMQKEGHSAL
PKTKTKHMPISGGHVGGSERLPAFISKKAGEGTKYGLTTEQAEAFAKFYGSNVDILFNLAKDLKEEAKEYNMPLDVLVPL
VYAMDYEMTVKPVDFFVRRRGAVFFNIHWVYDWKEPVIAYMAAKLGWTNEEKAKYTAELNQALKDATVPVDEQEQVALAK

Specific function: Conversion Of Glycerol 3-Phosphate To Dihydroxyacetone. Uses Molecular Oxygen Or Nitrate As Electron Acceptor. [C]

COG id: COG0578

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI285002233, Length=543, Percent_Identity=32.5966850828729, Blast_Score=259, Evalue=5e-69,
Organism=Homo sapiens, GI285002231, Length=543, Percent_Identity=32.5966850828729, Blast_Score=259, Evalue=5e-69,
Organism=Escherichia coli, GI2367226, Length=490, Percent_Identity=31.2244897959184, Blast_Score=161, Evalue=1e-40,
Organism=Escherichia coli, GI1788574, Length=375, Percent_Identity=27.2, Blast_Score=91, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17509253, Length=546, Percent_Identity=32.0512820512821, Blast_Score=246, Evalue=3e-65,
Organism=Caenorhabditis elegans, GI115534726, Length=547, Percent_Identity=33.8208409506399, Blast_Score=228, Evalue=6e-60,
Organism=Saccharomyces cerevisiae, GI6322036, Length=605, Percent_Identity=29.2561983471074, Blast_Score=214, Evalue=3e-56,
Organism=Drosophila melanogaster, GI161077125, Length=551, Percent_Identity=33.3938294010889, Blast_Score=255, Evalue=5e-68,
Organism=Drosophila melanogaster, GI24653942, Length=551, Percent_Identity=33.3938294010889, Blast_Score=255, Evalue=5e-68,
Organism=Drosophila melanogaster, GI24653944, Length=551, Percent_Identity=33.3938294010889, Blast_Score=255, Evalue=5e-68,
Organism=Drosophila melanogaster, GI20130025, Length=551, Percent_Identity=33.3938294010889, Blast_Score=255, Evalue=5e-68,
Organism=Drosophila melanogaster, GI24586295, Length=551, Percent_Identity=27.7676950998185, Blast_Score=173, Evalue=2e-43,
Organism=Drosophila melanogaster, GI19921278, Length=548, Percent_Identity=27.007299270073, Blast_Score=163, Evalue=3e-40,
Organism=Drosophila melanogaster, GI45550977, Length=403, Percent_Identity=24.8138957816377, Blast_Score=100, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR000447 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.1.5.3 [H]

Molecular weight: Translated: 62600; Mature: 62600

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: PS00977 FAD_G3PDH_1 ; PS00978 FAD_G3PDH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFSSKQRKDVLKEVHKQELDLIVIGGGITGSGIALDAVTRGLSTVVFEMQDFAAGTSSR
CCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCC
STKLVHGGLRYLKQFEVKMVAEVGKERAIVYENGPHVTTPEWMLLPFHKGGTFGAFTTSI
CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCHHHHHH
GLRVYDFLAGVKRSERRKMFSREETMKKEPLVKQEGLKGGGYYVEYRTDDARLTIEVMKE
HHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEEEEECCCCEEEHHHHHH
AIEHGAKAVNYAKVDGFLYKDGKVCGVRVIDLLDGKVYEVYGKKIVNAAGPWVDTLREKD
HHHHCHHHCEEEEECCEEEECCCEEEEEEEEHHCCCEEEHHHHHHHHCCCCHHHHHHHCC
NSKKGKVLQLSKGVHLVIDQKRFPLGQAIYFDTPDGRMVFAIPRGNKTYVGTTDTFYDKD
CCCCCCEEEECCCEEEEEECCCCCCCCEEEEECCCCEEEEEEECCCEEEECCCCCCCCCC
AAVPKMTTEDRAYIIKAINYMFPTVKITEKDIESSWAGVRPLIYEEGKSASEISRKDEIW
CCCCCCCCCCHHHHHHHHHHHCCCEEEEHHHHHHCCCCCCCEEEECCCCHHHHHHHCCCE
TSDSGLITIAGGKLTGYRKMAEMVVDYVGSLMQKEGHSALPKTKTKHMPISGGHVGGSER
ECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
LPAFISKKAGEGTKYGLTTEQAEAFAKFYGSNVDILFNLAKDLKEEAKEYNMPLDVLVPL
CCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH
VYAMDYEMTVKPVDFFVRRRGAVFFNIHWVYDWKEPVIAYMAAKLGWTNEEKAKYTAELN
HHHCCCCEEECHHHHHHHCCCEEEEEEEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHH
QALKDATVPVDEQEQVALAK
HHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNFSSKQRKDVLKEVHKQELDLIVIGGGITGSGIALDAVTRGLSTVVFEMQDFAAGTSSR
CCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCC
STKLVHGGLRYLKQFEVKMVAEVGKERAIVYENGPHVTTPEWMLLPFHKGGTFGAFTTSI
CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCHHHHHH
GLRVYDFLAGVKRSERRKMFSREETMKKEPLVKQEGLKGGGYYVEYRTDDARLTIEVMKE
HHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEEEEECCCCEEEHHHHHH
AIEHGAKAVNYAKVDGFLYKDGKVCGVRVIDLLDGKVYEVYGKKIVNAAGPWVDTLREKD
HHHHCHHHCEEEEECCEEEECCCEEEEEEEEHHCCCEEEHHHHHHHHCCCCHHHHHHHCC
NSKKGKVLQLSKGVHLVIDQKRFPLGQAIYFDTPDGRMVFAIPRGNKTYVGTTDTFYDKD
CCCCCCEEEECCCEEEEEECCCCCCCCEEEEECCCCEEEEEEECCCEEEECCCCCCCCCC
AAVPKMTTEDRAYIIKAINYMFPTVKITEKDIESSWAGVRPLIYEEGKSASEISRKDEIW
CCCCCCCCCCHHHHHHHHHHHCCCEEEEHHHHHHCCCCCCCEEEECCCCHHHHHHHCCCE
TSDSGLITIAGGKLTGYRKMAEMVVDYVGSLMQKEGHSALPKTKTKHMPISGGHVGGSER
ECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
LPAFISKKAGEGTKYGLTTEQAEAFAKFYGSNVDILFNLAKDLKEEAKEYNMPLDVLVPL
CCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH
VYAMDYEMTVKPVDFFVRRRGAVFFNIHWVYDWKEPVIAYMAAKLGWTNEEKAKYTAELN
HHHCCCCEEECHHHHHHHCCCEEEEEEEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHH
QALKDATVPVDEQEQVALAK
HHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2127799; 9579061; 9384377; 1809833 [H]