Click here to switch to the map view.

The map label for this gene is ydcC [H]

Identifier: 152974081

GI number: 152974081

Start: 248791

End: 249807

Strand: Direct

Name: ydcC [H]

Synonym: Bcer98_0237

Alternate gene names: 152974081

Gene position: 248791-249807 (Clockwise)

Preceding gene: 152974080

Following gene: 152974082

Centisome position: 6.09

GC content: 36.87

Gene sequence:

>1017_bases
ATGATGAAAAGGCAGCTATTTTTAGTGATTGTCGGTTTATTGACCGTTTTTGTGCTAGCGGGTTGTATGGAGAAGAAACA
GGAAGATGTTGTGCGGGATTTAGAAGCGAAAGTGAAAGGGATGAAGAGCTACCAGGCTGAAGCAACATTGTCTATTAAGA
CGGGAAATGAGCCGCAAGAGTACAAAGTAGAAGTTTGGCACAAAGAGCCTGCTTATTACCGTGTGAATTTGAAAAATGCG
AAGAAAGATCAAAGTCAAATTATTTTAAGAAATAATGAAGGTGTGTTTGTGTTAACACCATCTCTTAATAAAAGTTTTCG
CTTCCAAAGCGATTGGCCACAAAATAGCAGTCAAGCTTATTTATATGAGTCGCTTGTAAGGGACATCTTAAAGGATAAGA
AGAATCTCTCGTTTAAAAAGACCGATAAATACTATGTATTTAAGACAAAAACGAATTATCATCATCAAAACATGTTACCA
CAGCAGGAAATAAAATTGAATAAGAGTGATTTAGCACCTGTTTCAGTAAAACTAATGGATAACGATCAAAATGTTCTTGT
GAAAGTCGACTTCTCAAAGGTGAAATTTGATGCAAAATTTGATAAAGGTGCTTTTGATATGAAACAAAATATGTCAAGAG
CACAAATGGATGTACAAACAACTGTGAAAGAAGATAAGTCATTTGCTATTTTATATCCGCGCGATACCCCGCAAGGTGTT
GTTTTAAAAGAAGAGAAAGAGTTAAAGACAGACAGTGGCAAGCGTGCGATTCTCACATACACTGGAGAGAAGAAATCTTT
TACTTTAATACAAGAAAAGGCAAAAGCTGCGGAGGCTTCGTCGCCAATTCGTGTAAGTGGAGAGTTAGTTGACCTAGGCT
TTACAATTGGCGCATTAACAAAGGACTCCTTAACATGGTCTCATAACGGAGTGGAATATATGCTTGTGTCTAAAGGTTTA
AAACAAGAAGAGTTGTTAATGGTTGCTCGTTCTGTTACAGAAAAGCAGGTGAAATGA

Upstream 100 bases:

>100_bases
CGTCATGCTAGTCTGCATATTTTGAAGCTTTGTCTCATATATTTGAGGTAGCGATAGGGAAGAAATATCTTCCATTTATT
TATGGGGCAAAGGGGCTGAA

Downstream 100 bases:

>100_bases
CCTTTTTTAGACGTGGTGATATATACACCACGTTTTTTCTTACTTCAAGGAATGGATTTCGTGAAAAGTTGCATATAAAA
GAATAAGCTTCGTATATCTT

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MMKRQLFLVIVGLLTVFVLAGCMEKKQEDVVRDLEAKVKGMKSYQAEATLSIKTGNEPQEYKVEVWHKEPAYYRVNLKNA
KKDQSQIILRNNEGVFVLTPSLNKSFRFQSDWPQNSSQAYLYESLVRDILKDKKNLSFKKTDKYYVFKTKTNYHHQNMLP
QQEIKLNKSDLAPVSVKLMDNDQNVLVKVDFSKVKFDAKFDKGAFDMKQNMSRAQMDVQTTVKEDKSFAILYPRDTPQGV
VLKEEKELKTDSGKRAILTYTGEKKSFTLIQEKAKAAEASSPIRVSGELVDLGFTIGALTKDSLTWSHNGVEYMLVSKGL
KQEELLMVARSVTEKQVK

Sequences:

>Translated_338_residues
MMKRQLFLVIVGLLTVFVLAGCMEKKQEDVVRDLEAKVKGMKSYQAEATLSIKTGNEPQEYKVEVWHKEPAYYRVNLKNA
KKDQSQIILRNNEGVFVLTPSLNKSFRFQSDWPQNSSQAYLYESLVRDILKDKKNLSFKKTDKYYVFKTKTNYHHQNMLP
QQEIKLNKSDLAPVSVKLMDNDQNVLVKVDFSKVKFDAKFDKGAFDMKQNMSRAQMDVQTTVKEDKSFAILYPRDTPQGV
VLKEEKELKTDSGKRAILTYTGEKKSFTLIQEKAKAAEASSPIRVSGELVDLGFTIGALTKDSLTWSHNGVEYMLVSKGL
KQEELLMVARSVTEKQVK
>Mature_338_residues
MMKRQLFLVIVGLLTVFVLAGCMEKKQEDVVRDLEAKVKGMKSYQAEATLSIKTGNEPQEYKVEVWHKEPAYYRVNLKNA
KKDQSQIILRNNEGVFVLTPSLNKSFRFQSDWPQNSSQAYLYESLVRDILKDKKNLSFKKTDKYYVFKTKTNYHHQNMLP
QQEIKLNKSDLAPVSVKLMDNDQNVLVKVDFSKVKFDAKFDKGAFDMKQNMSRAQMDVQTTVKEDKSFAILYPRDTPQGV
VLKEEKELKTDSGKRAILTYTGEKKSFTLIQEKAKAAEASSPIRVSGELVDLGFTIGALTKDSLTWSHNGVEYMLVSKGL
KQEELLMVARSVTEKQVK

Specific function: required for efficient sporulation [H]

COG id: COG2834

COG function: function code M; Outer membrane lipoprotein-sorting protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38707; Mature: 38707

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKRQLFLVIVGLLTVFVLAGCMEKKQEDVVRDLEAKVKGMKSYQAEATLSIKTGNEPQE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCE
YKVEVWHKEPAYYRVNLKNAKKDQSQIILRNNEGVFVLTPSLNKSFRFQSDWPQNSSQAY
EEEEEEECCCCEEEEEECCCCCCCCEEEEECCCCEEEEECCCCCCEEECCCCCCCCCCHH
LYESLVRDILKDKKNLSFKKTDKYYVFKTKTNYHHQNMLPQQEIKLNKSDLAPVSVKLMD
HHHHHHHHHHHHHHCCCEEECCEEEEEEEECCCCHHHCCCHHHHCCCCCCCCEEEEEEEE
NDQNVLVKVDFSKVKFDAKFDKGAFDMKQNMSRAQMDVQTTVKEDKSFAILYPRDTPQGV
CCCEEEEEEEHHHEEEECCCCCCCHHHHHCHHHHHHHHHHHHCCCCCEEEEECCCCCCCE
VLKEEKELKTDSGKRAILTYTGEKKSFTLIQEKAKAAEASSPIRVSGELVDLGFTIGALT
EEECCHHCCCCCCCEEEEEEECCCCEEHHHHHHHHHHCCCCCEEEECEEEEEEEEEECEE
KDSLTWSHNGVEYMLVSKGLKQEELLMVARSVTEKQVK
CCCEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMKRQLFLVIVGLLTVFVLAGCMEKKQEDVVRDLEAKVKGMKSYQAEATLSIKTGNEPQE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCE
YKVEVWHKEPAYYRVNLKNAKKDQSQIILRNNEGVFVLTPSLNKSFRFQSDWPQNSSQAY
EEEEEEECCCCEEEEEECCCCCCCCEEEEECCCCEEEEECCCCCCEEECCCCCCCCCCHH
LYESLVRDILKDKKNLSFKKTDKYYVFKTKTNYHHQNMLPQQEIKLNKSDLAPVSVKLMD
HHHHHHHHHHHHHHCCCEEECCEEEEEEEECCCCHHHCCCHHHHCCCCCCCCEEEEEEEE
NDQNVLVKVDFSKVKFDAKFDKGAFDMKQNMSRAQMDVQTTVKEDKSFAILYPRDTPQGV
CCCEEEEEEEHHHEEEECCCCCCCHHHHHCHHHHHHHHHHHHCCCCCEEEEECCCCCCCE
VLKEEKELKTDSGKRAILTYTGEKKSFTLIQEKAKAAEASSPIRVSGELVDLGFTIGALT
EEECCHHCCCCCCCEEEEEEECCCCEEHHHHHHHHHHCCCCCEEEECEEEEEEEEEECEE
KDSLTWSHNGVEYMLVSKGLKQEELLMVARSVTEKQVK
CCCEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]