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The map label for this gene is sgrR [H]

Identifier: 152971488

GI number: 152971488

Start: 3251320

End: 3252999

Strand: Direct

Name: sgrR [H]

Synonym: KPN_02961

Alternate gene names: 152971488

Gene position: 3251320-3252999 (Clockwise)

Preceding gene: 152971482

Following gene: 152971494

Centisome position: 61.17

GC content: 57.92

Gene sequence:

>1680_bases
ATGAATATCTTCGAGGCGCATTTTCGCAGACTGCACGCCCGCTACGGCGCAGGTCAGACGCACGAATTACAGATGCAGGA
GATCGCCGCCATCTTCGGCTGTTCAGTGCGTAACTGCCGTATTGCGCTGAAGAAGATGCATCAGGAAAAATGGCTCGACT
GGCAGCCGCAGCGCGGACGCGGCAAGCGCTCACGGCTCCATCTGTTAACCTCGCCGGAAAAGCTGTTCAGCCAGAACGTC
AATAAGCTGCTGGAGAAGCAGGATTACGGCAACGTGCTGAGGTTTATCGGCAACGACAAGTATCTGCTGGATCGCCTGAG
CCTGTGGCGCTTTGGGGTACAGGATAAAAGCAGCGAAACGCGGGTGCGCATCCCCTACTACCGCAATCTGGATCCGCTTA
ATCCGCTCGTTCCCCTGCGGCGAACCGAACGCCACCTCCTGCGCCAGTGCCTGAGCGGGCTGACGCGCTATGACGCCATT
CAGGGCAGGATCGTCCCCGATATCGCCCACTACTGGACCCACAACGACGACTTTACCCGCTGGGAGTTCTGGCTGAAATC
CACCGCCCGCTTTGCCGATGGCAATGAGCTGGATGCCAGCGCCGTTCAGCGCGGCCTGCTCGCCGCCAGCCAGAGCCCGC
AGTTCGCGCCGCTTTTCAGCCCAATCAAAGCCATCACCGCTGACGCCCCCTGGCATCTGGTGATTGAAACGCATCACCCG
GTCAGGCGGCTCGACTGCCTGCTCGCCACCCAGCCGACGATGCTGTTTGATTACCAGCACGGACACATCCGCTGTACCGG
CGCTTTCCACCTGCAGGAGCACAGCGACAACTTTATGGTTTTGCGGCGCAATCAACACTGGCATCAGGCGCGCCCCGGAC
TGGATGAGATCACCATTTTCACCTGGGCGCCAGAACATATCAGCATGAGCTTTATTCCCCTGCTGCGGGGCGAAGAGGCG
CAGGATGACCGCCCGCTTAACGAGCGTAGTCTGGAACAGGGATGCTGTTTTGTTCTGCTCGACGGTGACGGTGCCTTTGC
GGATGAGGCCAGAAGACGGTTTATCAATTATCTGCTGCAACCTGTCGAACTCCTCAGCCAGACGCAGCTTCCCGACGAAT
ACGCACGCATCCTCTCCGTTGCTCAGGGCATGCTGCCGCATTGGAATCACCGCCCGGTGGATTTCGGCGGGATCACCGCG
CCGTTTAACCTGCGTCAGCCGGTGATCATCAGCACCTTTCAGCAACCGGAACTGGCGGAGCTTGCCGGGGCGATTCGCAT
CCTGCTTGAGCGCTGGCATATTCGCGCCGAAATACGGATCGACGCATTTGACCGCTTTAACAGCCAGCCGCTTCCTCCTG
CGGATATCTGGCTCAGCAACTTTATGCTCGATACGCTTTCGGTTCCGGCGTTTCTGGAATGGCTGGCGTCCACCACGCTG
TTTACACGACTGCCTGAATCCCAGCGACGCAACCTGAACGCCCTGCTGTCGACCATTCTGAACAGCGACGATGAACAGGC
ATTCGCCACCATTGCCGCCTTTTTCCATGAGATTACCCATCAACGATATGTCATTCCTTTGCTGCATCACTGGATGGAAT
TTGCGACCGAGAAGTCATTTACCTGGCGGGATTTAAATACGCTGGGATGGCCGGATTTCAGCCAACTTTGGCTCGAATAA

Upstream 100 bases:

>100_bases
CCGGTTTTCGCTTAAAACCGGAAAATTTATGAGGGCAATCACGCCGCAAACCGTCAGAAAGAGATAAAAGAGGAAATCGC
GTTCGGCGGGAGGCCATCAT

Downstream 100 bases:

>100_bases
TGCTACGCCCGCAAAAGCTCGCTAAAGGGCCTTTAAAGGCCTTTAAGGGTAAGGGAGAGAAGTGTGGGATTTGGGGGGGA
ATGTTTGACCATCTGCATTG

Product: putative dipeptide/oligopeptide/nickel ABC-type transport system periplasmic component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 559; Mature: 559

Protein sequence:

>559_residues
MNIFEAHFRRLHARYGAGQTHELQMQEIAAIFGCSVRNCRIALKKMHQEKWLDWQPQRGRGKRSRLHLLTSPEKLFSQNV
NKLLEKQDYGNVLRFIGNDKYLLDRLSLWRFGVQDKSSETRVRIPYYRNLDPLNPLVPLRRTERHLLRQCLSGLTRYDAI
QGRIVPDIAHYWTHNDDFTRWEFWLKSTARFADGNELDASAVQRGLLAASQSPQFAPLFSPIKAITADAPWHLVIETHHP
VRRLDCLLATQPTMLFDYQHGHIRCTGAFHLQEHSDNFMVLRRNQHWHQARPGLDEITIFTWAPEHISMSFIPLLRGEEA
QDDRPLNERSLEQGCCFVLLDGDGAFADEARRRFINYLLQPVELLSQTQLPDEYARILSVAQGMLPHWNHRPVDFGGITA
PFNLRQPVIISTFQQPELAELAGAIRILLERWHIRAEIRIDAFDRFNSQPLPPADIWLSNFMLDTLSVPAFLEWLASTTL
FTRLPESQRRNLNALLSTILNSDDEQAFATIAAFFHEITHQRYVIPLLHHWMEFATEKSFTWRDLNTLGWPDFSQLWLE

Sequences:

>Translated_559_residues
MNIFEAHFRRLHARYGAGQTHELQMQEIAAIFGCSVRNCRIALKKMHQEKWLDWQPQRGRGKRSRLHLLTSPEKLFSQNV
NKLLEKQDYGNVLRFIGNDKYLLDRLSLWRFGVQDKSSETRVRIPYYRNLDPLNPLVPLRRTERHLLRQCLSGLTRYDAI
QGRIVPDIAHYWTHNDDFTRWEFWLKSTARFADGNELDASAVQRGLLAASQSPQFAPLFSPIKAITADAPWHLVIETHHP
VRRLDCLLATQPTMLFDYQHGHIRCTGAFHLQEHSDNFMVLRRNQHWHQARPGLDEITIFTWAPEHISMSFIPLLRGEEA
QDDRPLNERSLEQGCCFVLLDGDGAFADEARRRFINYLLQPVELLSQTQLPDEYARILSVAQGMLPHWNHRPVDFGGITA
PFNLRQPVIISTFQQPELAELAGAIRILLERWHIRAEIRIDAFDRFNSQPLPPADIWLSNFMLDTLSVPAFLEWLASTTL
FTRLPESQRRNLNALLSTILNSDDEQAFATIAAFFHEITHQRYVIPLLHHWMEFATEKSFTWRDLNTLGWPDFSQLWLE
>Mature_559_residues
MNIFEAHFRRLHARYGAGQTHELQMQEIAAIFGCSVRNCRIALKKMHQEKWLDWQPQRGRGKRSRLHLLTSPEKLFSQNV
NKLLEKQDYGNVLRFIGNDKYLLDRLSLWRFGVQDKSSETRVRIPYYRNLDPLNPLVPLRRTERHLLRQCLSGLTRYDAI
QGRIVPDIAHYWTHNDDFTRWEFWLKSTARFADGNELDASAVQRGLLAASQSPQFAPLFSPIKAITADAPWHLVIETHHP
VRRLDCLLATQPTMLFDYQHGHIRCTGAFHLQEHSDNFMVLRRNQHWHQARPGLDEITIFTWAPEHISMSFIPLLRGEEA
QDDRPLNERSLEQGCCFVLLDGDGAFADEARRRFINYLLQPVELLSQTQLPDEYARILSVAQGMLPHWNHRPVDFGGITA
PFNLRQPVIISTFQQPELAELAGAIRILLERWHIRAEIRIDAFDRFNSQPLPPADIWLSNFMLDTLSVPAFLEWLASTTL
FTRLPESQRRNLNALLSTILNSDDEQAFATIAAFFHEITHQRYVIPLLHHWMEFATEKSFTWRDLNTLGWPDFSQLWLE

Specific function: Activates the small RNA gene sgrS under glucose- phosphate stress conditions as well as yfdZ. Represses its own transcription under both stress and non-stress conditions. Might act as a sensor of the intracellular accumulation of phosphoglucose by binding

COG id: COG4533

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786256, Length=552, Percent_Identity=26.6304347826087, Blast_Score=181, Evalue=1e-46,
Organism=Escherichia coli, GI1786650, Length=554, Percent_Identity=24.9097472924188, Blast_Score=140, Evalue=3e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 65257; Mature: 65257

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIFEAHFRRLHARYGAGQTHELQMQEIAAIFGCSVRNCRIALKKMHQEKWLDWQPQRGR
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCC
GKRSRLHLLTSPEKLFSQNVNKLLEKQDYGNVLRFIGNDKYLLDRLSLWRFGVQDKSSET
CCCCEEEEECCHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCC
RVRIPYYRNLDPLNPLVPLRRTERHLLRQCLSGLTRYDAIQGRIVPDIAHYWTHNDDFTR
EEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHH
WEFWLKSTARFADGNELDASAVQRGLLAASQSPQFAPLFSPIKAITADAPWHLVIETHHP
HHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCC
VRRLDCLLATQPTMLFDYQHGHIRCTGAFHLQEHSDNFMVLRRNQHWHQARPGLDEITIF
HHHHHHHHHCCCCEEEEECCCEEEEEEEEEEEECCCCEEEEECCCCHHHCCCCCCCEEEE
TWAPEHISMSFIPLLRGEEAQDDRPLNERSLEQGCCFVLLDGDGAFADEARRRFINYLLQ
EECHHHCCEEEEHHHCCCCCCCCCCCCHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHH
PVELLSQTQLPDEYARILSVAQGMLPHWNHRPVDFGGITAPFNLRQPVIISTFQQPELAE
HHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHH
LAGAIRILLERWHIRAEIRIDAFDRFNSQPLPPADIWLSNFMLDTLSVPAFLEWLASTTL
HHHHHHHHHHHHCEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FTRLPESQRRNLNALLSTILNSDDEQAFATIAAFFHEITHQRYVIPLLHHWMEFATEKSF
HHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC
TWRDLNTLGWPDFSQLWLE
EECCCCCCCCCCHHHHHCC
>Mature Secondary Structure
MNIFEAHFRRLHARYGAGQTHELQMQEIAAIFGCSVRNCRIALKKMHQEKWLDWQPQRGR
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCC
GKRSRLHLLTSPEKLFSQNVNKLLEKQDYGNVLRFIGNDKYLLDRLSLWRFGVQDKSSET
CCCCEEEEECCHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCC
RVRIPYYRNLDPLNPLVPLRRTERHLLRQCLSGLTRYDAIQGRIVPDIAHYWTHNDDFTR
EEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHH
WEFWLKSTARFADGNELDASAVQRGLLAASQSPQFAPLFSPIKAITADAPWHLVIETHHP
HHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCC
VRRLDCLLATQPTMLFDYQHGHIRCTGAFHLQEHSDNFMVLRRNQHWHQARPGLDEITIF
HHHHHHHHHCCCCEEEEECCCEEEEEEEEEEEECCCCEEEEECCCCHHHCCCCCCCEEEE
TWAPEHISMSFIPLLRGEEAQDDRPLNERSLEQGCCFVLLDGDGAFADEARRRFINYLLQ
EECHHHCCEEEEHHHCCCCCCCCCCCCHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHH
PVELLSQTQLPDEYARILSVAQGMLPHWNHRPVDFGGITAPFNLRQPVIISTFQQPELAE
HHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHH
LAGAIRILLERWHIRAEIRIDAFDRFNSQPLPPADIWLSNFMLDTLSVPAFLEWLASTTL
HHHHHHHHHHHHCEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FTRLPESQRRNLNALLSTILNSDDEQAFATIAAFFHEITHQRYVIPLLHHWMEFATEKSF
HHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC
TWRDLNTLGWPDFSQLWLE
EECCCCCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA