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The map label for this gene is yddH [H]

Identifier: 152971494

GI number: 152971494

Start: 3261628

End: 3262200

Strand: Direct

Name: yddH [H]

Synonym: KPN_02967

Alternate gene names: 152971494

Gene position: 3261628-3262200 (Clockwise)

Preceding gene: 152971488

Following gene: 152971496

Centisome position: 61.37

GC content: 55.67

Gene sequence:

>573_bases
ATGTCCGTTCAGCCTGTCGAAATAAGTAAGGCCTATCGTTTATTGCAGGTCGGGTCCACCACCATGATTTCCGCAAAATA
TGATGGCGTCGAAAATGTCATGTCAGCCGCCTGGGTTGGGCTGGCAGGCGAGCGAAAAGTGGTGGCCTATATTGGCACCC
AGGCTTTCACTCGTCAGCTGGTGGAAAAGAGCGGCTATTTCGTGGTGCAGATCCCCGTAGTCAGCCAGATGGCAACCGTC
CTCTACGCTGGCGGGCGCAGCTCTGCCGACGCGCCGGATAAAAATGACACCATCCCCTTCTTTTATCAGCCGGAATTTGA
TCTTCCTCTTGTGGCAGGCTGTGCGGGCTGGCTGGTGTGCAAAGTGATGCCCTACCCGGACATTCAGCAGCAACACAATC
TGTTTATGGGCGATATCGTCGCCGCCTGGAGCGATGACCGGGTATTCCGCAACGGACACTGGATTTTTGATGATGCGCCG
GACGAGCTACGGACCGTTCACTATGTCGCAGGCGGGCAGTTCTATGCCATCGGCAAAGGCAGCAAATTCGATCATGGGCC
GGGTCAGGACTGA

Upstream 100 bases:

>100_bases
CGTTGCACGGTGGATTACGAAAGGGGGCCAGAAAATGAACATGCCCTCAATAAATATTCAGATAATCATTACGTTAAATA
GCATGCACAAAGGAAAAACC

Downstream 100 bases:

>100_bases
CCCTCCCCGGTCATGCGGATCGCTGACGAGATGTCTGCGCAACAGAGCGGCTGATACTCCGGCGCCAGACGCCGGGCGCC
TGCCCGTACTGGCGCTTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MSVQPVEISKAYRLLQVGSTTMISAKYDGVENVMSAAWVGLAGERKVVAYIGTQAFTRQLVEKSGYFVVQIPVVSQMATV
LYAGGRSSADAPDKNDTIPFFYQPEFDLPLVAGCAGWLVCKVMPYPDIQQQHNLFMGDIVAAWSDDRVFRNGHWIFDDAP
DELRTVHYVAGGQFYAIGKGSKFDHGPGQD

Sequences:

>Translated_190_residues
MSVQPVEISKAYRLLQVGSTTMISAKYDGVENVMSAAWVGLAGERKVVAYIGTQAFTRQLVEKSGYFVVQIPVVSQMATV
LYAGGRSSADAPDKNDTIPFFYQPEFDLPLVAGCAGWLVCKVMPYPDIQQQHNLFMGDIVAAWSDDRVFRNGHWIFDDAP
DELRTVHYVAGGQFYAIGKGSKFDHGPGQD
>Mature_189_residues
SVQPVEISKAYRLLQVGSTTMISAKYDGVENVMSAAWVGLAGERKVVAYIGTQAFTRQLVEKSGYFVVQIPVVSQMATVL
YAGGRSSADAPDKNDTIPFFYQPEFDLPLVAGCAGWLVCKVMPYPDIQQQHNLFMGDIVAAWSDDRVFRNGHWIFDDAPD
ELRTVHYVAGGQFYAIGKGSKFDHGPGQD

Specific function: Unknown

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flavoredoxin family [H]

Homologues:

Organism=Escherichia coli, GI87081916, Length=183, Percent_Identity=34.9726775956284, Blast_Score=100, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002563
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01613 Flavin_Reduct [H]

EC number: NA

Molecular weight: Translated: 20919; Mature: 20788

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVQPVEISKAYRLLQVGSTTMISAKYDGVENVMSAAWVGLAGERKVVAYIGTQAFTRQL
CCCCCCHHHHHHHHEECCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHH
VEKSGYFVVQIPVVSQMATVLYAGGRSSADAPDKNDTIPFFYQPEFDLPLVAGCAGWLVC
HHHCCCEEEEECHHHHHHHHHEECCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHEEEE
KVMPYPDIQQQHNLFMGDIVAAWSDDRVFRNGHWIFDDAPDELRTVHYVAGGQFYAIGKG
EECCCCCCHHHCCEEEEHEEEECCCCEEEECCCEEECCCCHHHEEEEEEECCEEEEECCC
SKFDHGPGQD
CCCCCCCCCC
>Mature Secondary Structure 
SVQPVEISKAYRLLQVGSTTMISAKYDGVENVMSAAWVGLAGERKVVAYIGTQAFTRQL
CCCCCHHHHHHHHEECCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHH
VEKSGYFVVQIPVVSQMATVLYAGGRSSADAPDKNDTIPFFYQPEFDLPLVAGCAGWLVC
HHHCCCEEEEECHHHHHHHHHEECCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHEEEE
KVMPYPDIQQQHNLFMGDIVAAWSDDRVFRNGHWIFDDAPDELRTVHYVAGGQFYAIGKG
EECCCCCCHHHCCEEEEHEEEECCCCEEEECCCEEECCCCHHHEEEEEEECCEEEEECCC
SKFDHGPGQD
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]