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The map label for this gene is yphH [H]

Identifier: 152971405

GI number: 152971405

Start: 3158294

End: 3159490

Strand: Direct

Name: yphH [H]

Synonym: KPN_02874

Alternate gene names: 152971405

Gene position: 3158294-3159490 (Clockwise)

Preceding gene: 152971400

Following gene: 152971406

Centisome position: 59.42

GC content: 55.05

Gene sequence:

>1197_bases
ATGCAGCGTACTGGCTTTAATAACGCCCGGGTCCGGCAGGCCAATAAGTCGATTTTTCTTTCCCATCTGTGGCGGGAAAA
GCAGCTCAGTAAATCACAGCTCTCTCAACTCACCGGTCTCTCCATTCCGGCGGTGAGCAATATTCTGGCCGAGCTGCTTA
GCGAGGGATTGATCGGTCACTCAACGGAACACTTGAGCAAACGGGGCGTGAACAGCGGCAGCTACCAGATCCCCGAGCAC
GGCGCCTGGACACTGTGCATGAATATCACCCCGACCAGCATTGAATATCAGCTTGCCGACGCCCGCCTGCTGGCAGTGGA
TGGTCATCAGCATTTGCCGGTCAACGCGCCCACTCCTCAGGCCCTGCTTGAGGCCATTGTTGAATGCTGGCGGCATATCC
ACCGCCGCTACCCGCAGCACAGCATCAATCTCGCCCTTGGCGTGCATGGACAGGTTGATCCGATTACCGGCGTTTCACAA
ACCATGCCCCAGGCACGCTGGAAAACACCGATCGAAATAAAGTATCTGCTTGAGGAGCGGCTTGGCGTGCAGGTTCGGGT
GGATAACGACTGCGTGATGCTGGCGCTGGCGGAGAAGTGGCAGCATCAGGGTACACAGCAGGATTTTTGCGTGATCAACG
TCGACTACGGTATCGGCTCGTCATTTGTGATTAACGATCATATTTATCGCGGCAGTCTGTACGGCAGCGGGCAGATTGGG
CATACGATTGTCAATCCTGACGGCAAAGCCTGCGACTGCGGAAGATACGGTTGCCTCGAAACCGTCGCCTCTCTCAGCGC
GCTGAAAAAACAGGCCCGAATGTGGCTCAAAACGCAGCCTGAAGCAACGCTCTCCCCTGAGCAGTTAACCACGGCGTCGC
TCATTGAGGCCTGGAAAGAGGGAGATGTGCAAATTCGCGCATGGGTTGATAACGCTGCCAACGCGATTGGCTTAAGCCTC
TATAATTTCCTGAATATATTAAATATTAATCAAATATGGCTTTACGGGCGCAGCTGCGCCTTCGGTGAGCAGTGGCTGGA
AAGTATCGTCAAACAAACGGGTTTCAACCCCTTTGACCACCGGGATACGCCGCGAGCGCACGCCACCCAAATTGGCTTTG
GCCAGCTGACACGCGCCCAGCAGCTGATGGGGATAGGTTATCTGTACGTTGAGGAGCAATTGCAGACGCTGGTTTAG

Upstream 100 bases:

>100_bases
AAACAAAACGAAGTAAAAGTTGCAATAACAGGAGTCTATATCGCCAATTCGCTGTTAAAATGCGCAATGCTCACGCAATA
TAGTTAAGGGAGTTAAGTGT

Downstream 100 bases:

>100_bases
TCATAAACGAACGTGGCGGAGCGCAAATTTGTGTATTACGTTTAAATCACACGTCTCTCATAACGAGCTGATTATGAACA
CACTCCGCTATTTTGATTTT

Product: putative NAGC-like transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MQRTGFNNARVRQANKSIFLSHLWREKQLSKSQLSQLTGLSIPAVSNILAELLSEGLIGHSTEHLSKRGVNSGSYQIPEH
GAWTLCMNITPTSIEYQLADARLLAVDGHQHLPVNAPTPQALLEAIVECWRHIHRRYPQHSINLALGVHGQVDPITGVSQ
TMPQARWKTPIEIKYLLEERLGVQVRVDNDCVMLALAEKWQHQGTQQDFCVINVDYGIGSSFVINDHIYRGSLYGSGQIG
HTIVNPDGKACDCGRYGCLETVASLSALKKQARMWLKTQPEATLSPEQLTTASLIEAWKEGDVQIRAWVDNAANAIGLSL
YNFLNILNINQIWLYGRSCAFGEQWLESIVKQTGFNPFDHRDTPRAHATQIGFGQLTRAQQLMGIGYLYVEEQLQTLV

Sequences:

>Translated_398_residues
MQRTGFNNARVRQANKSIFLSHLWREKQLSKSQLSQLTGLSIPAVSNILAELLSEGLIGHSTEHLSKRGVNSGSYQIPEH
GAWTLCMNITPTSIEYQLADARLLAVDGHQHLPVNAPTPQALLEAIVECWRHIHRRYPQHSINLALGVHGQVDPITGVSQ
TMPQARWKTPIEIKYLLEERLGVQVRVDNDCVMLALAEKWQHQGTQQDFCVINVDYGIGSSFVINDHIYRGSLYGSGQIG
HTIVNPDGKACDCGRYGCLETVASLSALKKQARMWLKTQPEATLSPEQLTTASLIEAWKEGDVQIRAWVDNAANAIGLSL
YNFLNILNINQIWLYGRSCAFGEQWLESIVKQTGFNPFDHRDTPRAHATQIGFGQLTRAQQLMGIGYLYVEEQLQTLV
>Mature_398_residues
MQRTGFNNARVRQANKSIFLSHLWREKQLSKSQLSQLTGLSIPAVSNILAELLSEGLIGHSTEHLSKRGVNSGSYQIPEH
GAWTLCMNITPTSIEYQLADARLLAVDGHQHLPVNAPTPQALLEAIVECWRHIHRRYPQHSINLALGVHGQVDPITGVSQ
TMPQARWKTPIEIKYLLEERLGVQVRVDNDCVMLALAEKWQHQGTQQDFCVINVDYGIGSSFVINDHIYRGSLYGSGQIG
HTIVNPDGKACDCGRYGCLETVASLSALKKQARMWLKTQPEATLSPEQLTTASLIEAWKEGDVQIRAWVDNAANAIGLSL
YNFLNILNINQIWLYGRSCAFGEQWLESIVKQTGFNPFDHRDTPRAHATQIGFGQLTRAQQLMGIGYLYVEEQLQTLV

Specific function: Unknown

COG id: COG1940

COG function: function code KG; Transcriptional regulator/sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ROK (nagC/xylR) family [H]

Homologues:

Organism=Homo sapiens, GI298566325, Length=219, Percent_Identity=26.4840182648402, Blast_Score=75, Evalue=9e-14,
Organism=Homo sapiens, GI298566315, Length=219, Percent_Identity=26.4840182648402, Blast_Score=75, Evalue=9e-14,
Organism=Homo sapiens, GI4885285, Length=219, Percent_Identity=26.4840182648402, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI190014632, Length=219, Percent_Identity=26.4840182648402, Blast_Score=75, Evalue=1e-13,
Organism=Escherichia coli, GI87082127, Length=397, Percent_Identity=66.4987405541562, Blast_Score=547, Evalue=1e-157,
Organism=Escherichia coli, GI1786891, Length=333, Percent_Identity=25.2252252252252, Blast_Score=95, Evalue=6e-21,
Organism=Escherichia coli, GI1787878, Length=337, Percent_Identity=25.2225519287834, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1787363, Length=237, Percent_Identity=24.8945147679325, Blast_Score=69, Evalue=5e-13,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000600
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00480 ROK [H]

EC number: NA

Molecular weight: Translated: 44487; Mature: 44487

Theoretical pI: Translated: 7.21; Mature: 7.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRTGFNNARVRQANKSIFLSHLWREKQLSKSQLSQLTGLSIPAVSNILAELLSEGLIGH
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC
STEHLSKRGVNSGSYQIPEHGAWTLCMNITPTSIEYQLADARLLAVDGHQHLPVNAPTPQ
CHHHHHHCCCCCCCEECCCCCCEEEEEECCCCCEEEEEECEEEEEECCCCCCCCCCCCHH
ALLEAIVECWRHIHRRYPQHSINLALGVHGQVDPITGVSQTMPQARWKTPIEIKYLLEER
HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHCCHHHCCCCHHHHHHHHHH
LGVQVRVDNDCVMLALAEKWQHQGTQQDFCVINVDYGIGSSFVINDHIYRGSLYGSGQIG
CCEEEEECCCEEEEEEHHHHHHCCCCCCEEEEEECCCCCCEEEEECEEEECCEECCCCCC
HTIVNPDGKACDCGRYGCLETVASLSALKKQARMWLKTQPEATLSPEQLTTASLIEAWKE
CEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHC
GDVQIRAWVDNAANAIGLSLYNFLNILNINQIWLYGRSCAFGEQWLESIVKQTGFNPFDH
CCEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCC
RDTPRAHATQIGFGQLTRAQQLMGIGYLYVEEQLQTLV
CCCCCHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHCC
>Mature Secondary Structure
MQRTGFNNARVRQANKSIFLSHLWREKQLSKSQLSQLTGLSIPAVSNILAELLSEGLIGH
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC
STEHLSKRGVNSGSYQIPEHGAWTLCMNITPTSIEYQLADARLLAVDGHQHLPVNAPTPQ
CHHHHHHCCCCCCCEECCCCCCEEEEEECCCCCEEEEEECEEEEEECCCCCCCCCCCCHH
ALLEAIVECWRHIHRRYPQHSINLALGVHGQVDPITGVSQTMPQARWKTPIEIKYLLEER
HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHCCHHHCCCCHHHHHHHHHH
LGVQVRVDNDCVMLALAEKWQHQGTQQDFCVINVDYGIGSSFVINDHIYRGSLYGSGQIG
CCEEEEECCCEEEEEEHHHHHHCCCCCCEEEEEECCCCCCEEEEECEEEECCEECCCCCC
HTIVNPDGKACDCGRYGCLETVASLSALKKQARMWLKTQPEATLSPEQLTTASLIEAWKE
CEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHC
GDVQIRAWVDNAANAIGLSLYNFLNILNINQIWLYGRSCAFGEQWLESIVKQTGFNPFDH
CCEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCC
RDTPRAHATQIGFGQLTRAQQLMGIGYLYVEEQLQTLV
CCCCCHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]